EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000008502 (Gene tree)
Gene ID: 107104736
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4228 bases
Position: chrKL654363.1:37532-41759
Accession: 107104736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006897	RRM_5	PF13893.6	5e-08	1	2
ENSCVAP00000006897	RRM_5	PF13893.6	5e-08	2	2
ENSCVAP00000006906	RRM_5	PF13893.6	5e-08	1	2
ENSCVAP00000006906	RRM_5	PF13893.6	5e-08	2	2
ENSCVAP00000024432	RRM_5	PF13893.6	5e-08	1	2
ENSCVAP00000024432	RRM_5	PF13893.6	5e-08	2	2
ENSCVAP00000006897	RRM_1	PF00076.22	2.3e-26	1	2
ENSCVAP00000006897	RRM_1	PF00076.22	2.3e-26	2	2
ENSCVAP00000006906	RRM_1	PF00076.22	2.3e-26	1	2
ENSCVAP00000006906	RRM_1	PF00076.22	2.3e-26	2	2
ENSCVAP00000024432	RRM_1	PF00076.22	2.3e-26	1	2
ENSCVAP00000024432	RRM_1	PF00076.22	2.3e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004207	-	3090	-	ENSCVAP00000006897	343 (aa)	-	UPI000742BE73
ENSCVAT00000004210	-	2207	XM_015404821	ENSCVAP00000024432	343 (aa)	XP_015260307	UPI000742BE73
ENSCVAT00000004197	-	1906	-	ENSCVAP00000006906	343 (aa)	-	UPI000742BE73

Gene Model

Click here to download ENSCVAG00000008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000008502	rbm4.3	97	37.709	ENSCVAG00000019349	rbm4.1	64	52.381
ENSCVAG00000008502	rbm4.3	99	64.387	ENSCVAG00000008508	rbm4.3	99	63.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008502	rbm4.3	100	77.522	ENSAPOG00000002991	rbm4.3	100	75.793	Acanthochromis_polyacanthus
ENSCVAG00000008502	rbm4.3	99	67.236	ENSAPOG00000002953	rbm4.3	99	66.571	Acanthochromis_polyacanthus
ENSCVAG00000008502	rbm4.3	99	63.610	ENSACIG00000021311	-	99	63.037	Amphilophus_citrinellus
ENSCVAG00000008502	rbm4.3	100	80.058	ENSACIG00000021295	rbm4.3	100	79.191	Amphilophus_citrinellus
ENSCVAG00000008502	rbm4.3	100	78.035	ENSAOCG00000007992	rbm4.3	100	76.590	Amphiprion_ocellaris
ENSCVAG00000008502	rbm4.3	99	67.622	ENSAOCG00000008015	rbm4.3	99	66.954	Amphiprion_ocellaris
ENSCVAG00000008502	rbm4.3	100	78.035	ENSAPEG00000017288	rbm4.3	100	76.590	Amphiprion_percula
ENSCVAG00000008502	rbm4.3	99	69.253	ENSAPEG00000017324	rbm4.3	99	67.147	Amphiprion_percula
ENSCVAG00000008502	rbm4.3	99	67.529	ENSATEG00000019375	rbm4.3	99	66.667	Anabas_testudineus
ENSCVAG00000008502	rbm4.3	100	75.723	ENSATEG00000019395	rbm4.3	100	75.723	Anabas_testudineus
ENSCVAG00000008502	rbm4.3	99	63.897	ENSACLG00000010620	-	99	63.324	Astatotilapia_calliptera
ENSCVAG00000008502	rbm4.3	100	78.510	ENSACLG00000010642	rbm4.3	100	77.364	Astatotilapia_calliptera
ENSCVAG00000008502	rbm4.3	53	70.718	ENSAMXG00000040224	rbm4.3	61	76.190	Astyanax_mexicanus
ENSCVAG00000008502	rbm4.3	99	62.500	ENSCSEG00000013659	rbm4.3	99	63.714	Cynoglossus_semilaevis
ENSCVAG00000008502	rbm4.3	99	68.571	ENSELUG00000022168	rbm4.3	99	64.756	Esox_lucius
ENSCVAG00000008502	rbm4.3	99	67.898	ENSELUG00000022155	rbm4.3	99	65.527	Esox_lucius
ENSCVAG00000008502	rbm4.3	98	65.819	ENSELUG00000022150	rbm4.3	99	63.401	Esox_lucius
ENSCVAG00000008502	rbm4.3	100	78.571	ENSFHEG00000023096	rbm4.3	100	79.487	Fundulus_heteroclitus
ENSCVAG00000008502	rbm4.3	80	67.025	ENSFHEG00000023137	rbm4.3	87	67.384	Fundulus_heteroclitus
ENSCVAG00000008502	rbm4.3	99	80.814	ENSGAFG00000001935	rbm4.3	99	80.814	Gambusia_affinis
ENSCVAG00000008502	rbm4.3	99	77.027	ENSGACG00000019980	rbm4.3	100	72.805	Gasterosteus_aculeatus
ENSCVAG00000008502	rbm4.3	99	63.897	ENSHBUG00000009020	-	99	63.324	Haplochromis_burtoni
ENSCVAG00000008502	rbm4.3	100	78.797	ENSHBUG00000009051	rbm4.3	100	77.650	Haplochromis_burtoni
ENSCVAG00000008502	rbm4.3	100	63.636	ENSHCOG00000010363	rbm4.3	99	62.712	Hippocampus_comes
ENSCVAG00000008502	rbm4.3	95	60.661	ENSHCOG00000010349	rbm4.3	99	60.857	Hippocampus_comes
ENSCVAG00000008502	rbm4.3	99	63.920	ENSIPUG00000022943	RBM4B	99	63.068	Ictalurus_punctatus
ENSCVAG00000008502	rbm4.3	99	60.519	ENSKMAG00000017468	rbm4.3	99	60.399	Kryptolebias_marmoratus
ENSCVAG00000008502	rbm4.3	100	76.857	ENSKMAG00000014541	rbm4.3	100	76.286	Kryptolebias_marmoratus
ENSCVAG00000008502	rbm4.3	55	80.000	ENSLBEG00000001025	rbm4.3	67	80.952	Labrus_bergylta
ENSCVAG00000008502	rbm4.3	99	66.189	ENSLBEG00000001071	-	99	65.903	Labrus_bergylta
ENSCVAG00000008502	rbm4.3	95	53.994	ENSLOCG00000002755	rbm4.3	99	54.762	Lepisosteus_oculatus
ENSCVAG00000008502	rbm4.3	99	67.529	ENSMAMG00000004715	-	83	66.667	Mastacembelus_armatus
ENSCVAG00000008502	rbm4.3	100	78.035	ENSMAMG00000004701	rbm4.3	100	77.457	Mastacembelus_armatus
ENSCVAG00000008502	rbm4.3	100	78.510	ENSMZEG00005028540	rbm4.3	100	77.364	Maylandia_zebra
ENSCVAG00000008502	rbm4.3	99	60.745	ENSMZEG00005007417	-	99	60.172	Maylandia_zebra
ENSCVAG00000008502	rbm4.3	85	79.932	ENSMZEG00005007441	rbm4.3	77	77.622	Maylandia_zebra
ENSCVAG00000008502	rbm4.3	85	59.396	ENSMZEG00005028537	-	81	59.589	Maylandia_zebra
ENSCVAG00000008502	rbm4.3	100	73.504	ENSMMOG00000012191	rbm4.3	100	72.857	Mola_mola
ENSCVAG00000008502	rbm4.3	91	74.359	ENSMALG00000003032	rbm4.3	95	73.077	Monopterus_albus
ENSCVAG00000008502	rbm4.3	100	74.277	ENSMALG00000015014	-	100	73.121	Monopterus_albus
ENSCVAG00000008502	rbm4.3	87	65.132	ENSMALG00000003001	rbm4.3	85	65.292	Monopterus_albus
ENSCVAG00000008502	rbm4.3	100	78.736	ENSNBRG00000012372	rbm4.3	100	77.011	Neolamprologus_brichardi
ENSCVAG00000008502	rbm4.3	99	63.897	ENSONIG00000018380	-	99	63.324	Oreochromis_niloticus
ENSCVAG00000008502	rbm4.3	100	78.063	ENSONIG00000018378	rbm4.3	100	76.923	Oreochromis_niloticus
ENSCVAG00000008502	rbm4.3	97	58.430	ENSORLG00000011589	rbm4.3	99	58.380	Oryzias_latipes
ENSCVAG00000008502	rbm4.3	100	68.678	ENSORLG00000024749	rbm4.3	100	67.147	Oryzias_latipes
ENSCVAG00000008502	rbm4.3	97	58.140	ENSORLG00020012474	rbm4.3	99	58.101	Oryzias_latipes_hni
ENSCVAG00000008502	rbm4.3	100	69.565	ENSORLG00020012482	rbm4.3	100	67.733	Oryzias_latipes_hni
ENSCVAG00000008502	rbm4.3	100	69.075	ENSORLG00015013721	rbm4.3	100	67.536	Oryzias_latipes_hsok
ENSCVAG00000008502	rbm4.3	97	57.267	ENSORLG00015013698	rbm4.3	99	58.659	Oryzias_latipes_hsok
ENSCVAG00000008502	rbm4.3	99	57.778	ENSOMEG00000005918	rbm4.3	99	60.335	Oryzias_melastigma
ENSCVAG00000008502	rbm4.3	100	71.965	ENSOMEG00000005950	rbm4.3	100	72.543	Oryzias_melastigma
ENSCVAG00000008502	rbm4.3	97	57.803	ENSOMEG00000005929	rbm4.3	98	58.592	Oryzias_melastigma
ENSCVAG00000008502	rbm4.3	93	64.565	ENSPKIG00000007001	rbm4.3	63	74.830	Paramormyrops_kingsleyae
ENSCVAG00000008502	rbm4.3	99	63.352	ENSPLAG00000006131	rbm4.3	99	60.969	Poecilia_latipinna
ENSCVAG00000008502	rbm4.3	100	85.879	ENSPLAG00000006077	rbm4.3	100	84.438	Poecilia_latipinna
ENSCVAG00000008502	rbm4.3	99	63.352	ENSPMEG00000024271	rbm4.3	98	61.739	Poecilia_mexicana
ENSCVAG00000008502	rbm4.3	99	64.205	ENSPMEG00000024263	rbm4.3	99	62.678	Poecilia_mexicana
ENSCVAG00000008502	rbm4.3	100	86.705	ENSPMEG00000024260	rbm4.3	100	85.549	Poecilia_mexicana
ENSCVAG00000008502	rbm4.3	99	61.960	ENSPREG00000002156	rbm4.3	99	58.501	Poecilia_reticulata
ENSCVAG00000008502	rbm4.3	100	86.127	ENSPREG00000002093	-	100	84.971	Poecilia_reticulata
ENSCVAG00000008502	rbm4.3	100	78.223	ENSPNYG00000018564	rbm4.3	100	77.937	Pundamilia_nyererei
ENSCVAG00000008502	rbm4.3	99	63.897	ENSPNYG00000018541	rbm4.3	99	63.324	Pundamilia_nyererei
ENSCVAG00000008502	rbm4.3	99	66.189	ENSSMAG00000013644	rbm4.3	99	64.080	Scophthalmus_maximus
ENSCVAG00000008502	rbm4.3	100	72.493	ENSSMAG00000013653	rbm4.3	100	71.633	Scophthalmus_maximus
ENSCVAG00000008502	rbm4.3	100	77.810	ENSSDUG00000018422	rbm4.3	100	76.369	Seriola_dumerili
ENSCVAG00000008502	rbm4.3	99	66.667	ENSSDUG00000018435	rbm4.3	99	66.092	Seriola_dumerili
ENSCVAG00000008502	rbm4.3	99	66.667	ENSSLDG00000017204	rbm4.3	99	66.092	Seriola_lalandi_dorsalis
ENSCVAG00000008502	rbm4.3	100	77.233	ENSSLDG00000017182	rbm4.3	100	75.793	Seriola_lalandi_dorsalis
ENSCVAG00000008502	rbm4.3	99	66.762	ENSSPAG00000008062	rbm4.3	99	66.092	Stegastes_partitus
ENSCVAG00000008502	rbm4.3	100	76.369	ENSSPAG00000008041	rbm4.3	85	74.640	Stegastes_partitus
ENSCVAG00000008502	rbm4.3	100	75.072	ENSTRUG00000023874	rbm4.3	100	74.785	Takifugu_rubripes
ENSCVAG00000008502	rbm4.3	99	64.571	ENSTRUG00000020901	rbm4.3	99	64.451	Takifugu_rubripes
ENSCVAG00000008502	rbm4.3	99	61.960	ENSTNIG00000005668	rbm4.3	99	61.850	Tetraodon_nigroviridis
ENSCVAG00000008502	rbm4.3	97	87.688	ENSXCOG00000005996	rbm4.3	98	87.316	Xiphophorus_couchianus
ENSCVAG00000008502	rbm4.3	99	63.352	ENSXCOG00000006001	rbm4.3	99	61.823	Xiphophorus_couchianus
ENSCVAG00000008502	rbm4.3	100	86.705	ENSXMAG00000025173	rbm4.3	100	85.549	Xiphophorus_maculatus
ENSCVAG00000008502	rbm4.3	99	63.352	ENSXMAG00000021997	rbm4.3	99	61.823	Xiphophorus_maculatus
ENSCVAG00000008502	rbm4.3	99	64.489	ENSXMAG00000011698	rbm4.3	99	62.108	Xiphophorus_maculatus