EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000008508 (Gene tree)
Gene ID: 107104734
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1975 bases
Position: chrKL654363.1:29103-31077
Accession: 107104734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024440	RRM_5	PF13893.6	1.3e-11	1	2
ENSCVAP00000024440	RRM_5	PF13893.6	1.3e-11	2	2
ENSCVAP00000024440	RRM_1	PF00076.22	3.2e-30	1	2
ENSCVAP00000024440	RRM_1	PF00076.22	3.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004186	-	1265	XM_015404817	ENSCVAP00000024440	340 (aa)	XP_015260303	UPI000742BF71

Gene Model

Click here to download ENSCVAG00000008508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000008508	rbm4.3	97	38.955	ENSCVAG00000019349	rbm4.1	65	54.305
ENSCVAG00000008508	rbm4.3	99	63.533	ENSCVAG00000008502	rbm4.3	99	64.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008508	rbm4.3	97	62.059	ENSAPOG00000002991	rbm4.3	96	61.765	Acanthochromis_polyacanthus
ENSCVAG00000008508	rbm4.3	100	80.114	ENSAPOG00000002953	rbm4.3	100	75.568	Acanthochromis_polyacanthus
ENSCVAG00000008508	rbm4.3	97	64.602	ENSACIG00000021295	rbm4.3	96	65.782	Amphilophus_citrinellus
ENSCVAG00000008508	rbm4.3	100	79.240	ENSACIG00000021311	-	100	75.731	Amphilophus_citrinellus
ENSCVAG00000008508	rbm4.3	100	79.772	ENSAOCG00000008015	rbm4.3	100	75.499	Amphiprion_ocellaris
ENSCVAG00000008508	rbm4.3	97	63.529	ENSAOCG00000007992	rbm4.3	96	62.941	Amphiprion_ocellaris
ENSCVAG00000008508	rbm4.3	97	63.824	ENSAPEG00000017288	rbm4.3	96	63.235	Amphiprion_percula
ENSCVAG00000008508	rbm4.3	100	80.627	ENSAPEG00000017324	rbm4.3	100	74.929	Amphiprion_percula
ENSCVAG00000008508	rbm4.3	97	66.172	ENSATEG00000019395	rbm4.3	96	62.985	Anabas_testudineus
ENSCVAG00000008508	rbm4.3	100	78.063	ENSATEG00000019375	rbm4.3	100	77.778	Anabas_testudineus
ENSCVAG00000008508	rbm4.3	100	79.532	ENSACLG00000010620	-	100	76.023	Astatotilapia_calliptera
ENSCVAG00000008508	rbm4.3	97	65.192	ENSACLG00000010642	rbm4.3	96	64.706	Astatotilapia_calliptera
ENSCVAG00000008508	rbm4.3	61	75.238	ENSAMXG00000040224	rbm4.3	82	74.500	Astyanax_mexicanus
ENSCVAG00000008508	rbm4.3	100	73.729	ENSCSEG00000013659	rbm4.3	100	72.316	Cynoglossus_semilaevis
ENSCVAG00000008508	rbm4.3	95	65.680	ENSDARG00000022129	rbm4.3	97	64.912	Danio_rerio
ENSCVAG00000008508	rbm4.3	99	71.714	ENSELUG00000022150	rbm4.3	97	70.058	Esox_lucius
ENSCVAG00000008508	rbm4.3	99	72.521	ENSELUG00000022155	rbm4.3	99	73.088	Esox_lucius
ENSCVAG00000008508	rbm4.3	100	63.380	ENSELUG00000022168	rbm4.3	100	65.156	Esox_lucius
ENSCVAG00000008508	rbm4.3	81	91.336	ENSFHEG00000023137	rbm4.3	86	91.209	Fundulus_heteroclitus
ENSCVAG00000008508	rbm4.3	100	60.563	ENSGAFG00000001935	rbm4.3	100	60.563	Gambusia_affinis
ENSCVAG00000008508	rbm4.3	94	74.444	ENSGACG00000019980	rbm4.3	95	60.933	Gasterosteus_aculeatus
ENSCVAG00000008508	rbm4.3	100	79.532	ENSHBUG00000009020	-	100	76.023	Haplochromis_burtoni
ENSCVAG00000008508	rbm4.3	97	65.192	ENSHBUG00000009051	rbm4.3	96	64.706	Haplochromis_burtoni
ENSCVAG00000008508	rbm4.3	95	72.673	ENSHCOG00000010349	rbm4.3	100	71.023	Hippocampus_comes
ENSCVAG00000008508	rbm4.3	100	64.607	ENSIPUG00000022943	RBM4B	100	63.231	Ictalurus_punctatus
ENSCVAG00000008508	rbm4.3	100	81.765	ENSKMAG00000017468	rbm4.3	100	80.882	Kryptolebias_marmoratus
ENSCVAG00000008508	rbm4.3	100	75.284	ENSLBEG00000001071	-	100	71.591	Labrus_bergylta
ENSCVAG00000008508	rbm4.3	53	72.527	ENSLBEG00000001025	rbm4.3	79	71.098	Labrus_bergylta
ENSCVAG00000008508	rbm4.3	95	58.287	ENSLOCG00000002755	rbm4.3	100	59.631	Lepisosteus_oculatus
ENSCVAG00000008508	rbm4.3	100	78.348	ENSMAMG00000004715	-	84	77.493	Mastacembelus_armatus
ENSCVAG00000008508	rbm4.3	97	64.809	ENSMAMG00000004701	rbm4.3	96	63.422	Mastacembelus_armatus
ENSCVAG00000008508	rbm4.3	97	65.192	ENSMZEG00005028540	rbm4.3	96	64.706	Maylandia_zebra
ENSCVAG00000008508	rbm4.3	89	68.212	ENSMZEG00005007441	rbm4.3	79	68.350	Maylandia_zebra
ENSCVAG00000008508	rbm4.3	100	76.023	ENSMZEG00005007417	-	100	72.515	Maylandia_zebra
ENSCVAG00000008508	rbm4.3	87	73.826	ENSMZEG00005028537	-	83	73.490	Maylandia_zebra
ENSCVAG00000008508	rbm4.3	97	61.877	ENSMMOG00000012191	rbm4.3	96	62.757	Mola_mola
ENSCVAG00000008508	rbm4.3	87	81.605	ENSMALG00000003001	rbm4.3	87	81.544	Monopterus_albus
ENSCVAG00000008508	rbm4.3	95	65.015	ENSMALG00000015014	-	89	61.905	Monopterus_albus
ENSCVAG00000008508	rbm4.3	98	62.462	ENSMALG00000003032	rbm4.3	94	61.146	Monopterus_albus
ENSCVAG00000008508	rbm4.3	97	64.897	ENSNBRG00000012372	rbm4.3	96	64.412	Neolamprologus_brichardi
ENSCVAG00000008508	rbm4.3	100	79.532	ENSONIG00000018380	-	100	76.023	Oreochromis_niloticus
ENSCVAG00000008508	rbm4.3	97	64.327	ENSONIG00000018378	rbm4.3	96	63.848	Oreochromis_niloticus
ENSCVAG00000008508	rbm4.3	100	76.857	ENSORLG00000012473	rbm4.3	100	76.000	Oryzias_latipes
ENSCVAG00000008508	rbm4.3	100	79.429	ENSORLG00000011589	rbm4.3	100	78.571	Oryzias_latipes
ENSCVAG00000008508	rbm4.3	96	57.310	ENSORLG00000024749	rbm4.3	96	56.176	Oryzias_latipes
ENSCVAG00000008508	rbm4.3	100	79.143	ENSORLG00020012474	rbm4.3	100	78.286	Oryzias_latipes_hni
ENSCVAG00000008508	rbm4.3	100	76.857	ENSORLG00020012464	rbm4.3	100	76.000	Oryzias_latipes_hni
ENSCVAG00000008508	rbm4.3	99	56.657	ENSORLG00020012482	rbm4.3	99	56.160	Oryzias_latipes_hni
ENSCVAG00000008508	rbm4.3	97	55.814	ENSORLG00015013721	rbm4.3	96	55.000	Oryzias_latipes_hsok
ENSCVAG00000008508	rbm4.3	100	77.143	ENSORLG00015013686	rbm4.3	100	76.286	Oryzias_latipes_hsok
ENSCVAG00000008508	rbm4.3	100	79.429	ENSORLG00015013698	rbm4.3	100	78.857	Oryzias_latipes_hsok
ENSCVAG00000008508	rbm4.3	97	76.991	ENSOMEG00000005929	rbm4.3	100	76.068	Oryzias_melastigma
ENSCVAG00000008508	rbm4.3	100	72.881	ENSOMEG00000005918	rbm4.3	100	72.599	Oryzias_melastigma
ENSCVAG00000008508	rbm4.3	96	58.551	ENSOMEG00000005950	rbm4.3	96	57.353	Oryzias_melastigma
ENSCVAG00000008508	rbm4.3	94	69.136	ENSPKIG00000007001	rbm4.3	100	64.589	Paramormyrops_kingsleyae
ENSCVAG00000008508	rbm4.3	100	85.387	ENSPLAG00000006131	rbm4.3	100	85.387	Poecilia_latipinna
ENSCVAG00000008508	rbm4.3	99	63.739	ENSPLAG00000006077	rbm4.3	99	63.739	Poecilia_latipinna
ENSCVAG00000008508	rbm4.3	100	84.527	ENSPMEG00000024271	rbm4.3	100	84.527	Poecilia_mexicana
ENSCVAG00000008508	rbm4.3	99	63.352	ENSPMEG00000024260	rbm4.3	99	63.352	Poecilia_mexicana
ENSCVAG00000008508	rbm4.3	100	90.882	ENSPMEG00000024263	rbm4.3	100	90.882	Poecilia_mexicana
ENSCVAG00000008508	rbm4.3	100	79.656	ENSPREG00000002156	rbm4.3	100	79.656	Poecilia_reticulata
ENSCVAG00000008508	rbm4.3	99	63.352	ENSPREG00000002093	-	99	64.205	Poecilia_reticulata
ENSCVAG00000008508	rbm4.3	97	65.782	ENSPNYG00000018564	rbm4.3	96	65.294	Pundamilia_nyererei
ENSCVAG00000008508	rbm4.3	100	79.532	ENSPNYG00000018541	rbm4.3	100	76.023	Pundamilia_nyererei
ENSCVAG00000008508	rbm4.3	100	66.667	ENSPNAG00000013053	rbm4.3	100	63.912	Pygocentrus_nattereri
ENSCVAG00000008508	rbm4.3	100	63.388	ENSSFOG00015015563	rbm4.3	100	62.331	Scleropages_formosus
ENSCVAG00000008508	rbm4.3	97	62.059	ENSSMAG00000013653	rbm4.3	96	57.988	Scophthalmus_maximus
ENSCVAG00000008508	rbm4.3	100	78.348	ENSSMAG00000013644	rbm4.3	100	72.934	Scophthalmus_maximus
ENSCVAG00000008508	rbm4.3	100	78.348	ENSSDUG00000018435	rbm4.3	100	74.644	Seriola_dumerili
ENSCVAG00000008508	rbm4.3	97	67.055	ENSSDUG00000018422	rbm4.3	96	63.343	Seriola_dumerili
ENSCVAG00000008508	rbm4.3	97	66.959	ENSSLDG00000017182	rbm4.3	96	63.235	Seriola_lalandi_dorsalis
ENSCVAG00000008508	rbm4.3	100	78.348	ENSSLDG00000017204	rbm4.3	100	74.644	Seriola_lalandi_dorsalis
ENSCVAG00000008508	rbm4.3	100	79.487	ENSSPAG00000008062	rbm4.3	100	75.214	Stegastes_partitus
ENSCVAG00000008508	rbm4.3	96	63.609	ENSSPAG00000008041	rbm4.3	76	65.506	Stegastes_partitus
ENSCVAG00000008508	rbm4.3	100	74.221	ENSTRUG00000020901	rbm4.3	100	72.521	Takifugu_rubripes
ENSCVAG00000008508	rbm4.3	97	60.882	ENSTRUG00000023874	rbm4.3	96	63.343	Takifugu_rubripes
ENSCVAG00000008508	rbm4.3	100	72.080	ENSTNIG00000005668	rbm4.3	100	71.795	Tetraodon_nigroviridis
ENSCVAG00000008508	rbm4.3	97	62.974	ENSXCOG00000005996	rbm4.3	97	63.848	Xiphophorus_couchianus
ENSCVAG00000008508	rbm4.3	100	89.706	ENSXCOG00000006001	rbm4.3	100	89.706	Xiphophorus_couchianus
ENSCVAG00000008508	rbm4.3	100	89.706	ENSXMAG00000021997	rbm4.3	100	89.706	Xiphophorus_maculatus
ENSCVAG00000008508	rbm4.3	97	62.974	ENSXMAG00000025173	rbm4.3	99	64.672	Xiphophorus_maculatus
ENSCVAG00000008508	rbm4.3	100	85.100	ENSXMAG00000011698	rbm4.3	100	85.100	Xiphophorus_maculatus