EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000008610 (Gene tree)
Gene ID: 107082573
Gene Symbol: si:rp71-84d19.3
Alias: -
Full Name: GTP binding protein 8 (putative)
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 21865 bases
Position: chrKL652503.1:1965747-1987611
Accession: 107082573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024501	MMR_HSR1	PF01926.23	8.3e-18	1	1
ENSCVAP00000007012	MMR_HSR1	PF01926.23	1.4e-17	1	1
ENSCVAP00000024511	MMR_HSR1	PF01926.23	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004021	-	1193	XM_015371333	ENSCVAP00000024511	291 (aa)	XP_015226819	UPI00074285BB
ENSCVAT00000004016	-	1192	-	ENSCVAP00000007012	291 (aa)	-	UPI00074285BB
ENSCVAT00000004034	-	567	-	ENSCVAP00000024501	188 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000008610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008610	si:rp71-84d19.3	91	71.512	ENSG00000163607	GTPBP8	99	71.512	Homo_sapiens
ENSCVAG00000008610	si:rp71-84d19.3	95	84.358	ENSAPOG00000019884	si:rp71-84d19.3	93	82.707	Acanthochromis_polyacanthus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSAMEG00000018089	GTPBP8	95	56.569	Ailuropoda_melanoleuca
ENSCVAG00000008610	si:rp71-84d19.3	91	88.953	ENSACIG00000018682	si:rp71-84d19.3	99	89.474	Amphilophus_citrinellus
ENSCVAG00000008610	si:rp71-84d19.3	95	83.799	ENSAOCG00000022531	si:rp71-84d19.3	98	79.286	Amphiprion_ocellaris
ENSCVAG00000008610	si:rp71-84d19.3	95	83.799	ENSAPEG00000023238	si:rp71-84d19.3	98	79.286	Amphiprion_percula
ENSCVAG00000008610	si:rp71-84d19.3	95	85.475	ENSATEG00000005805	si:rp71-84d19.3	99	85.475	Anabas_testudineus
ENSCVAG00000008610	si:rp71-84d19.3	91	67.836	ENSAPLG00000009443	GTPBP8	97	66.292	Anas_platyrhynchos
ENSCVAG00000008610	si:rp71-84d19.3	79	67.114	ENSACAG00000010189	GTPBP8	83	56.596	Anolis_carolinensis
ENSCVAG00000008610	si:rp71-84d19.3	94	68.182	ENSANAG00000024048	GTPBP8	100	68.182	Aotus_nancymaae
ENSCVAG00000008610	si:rp71-84d19.3	95	87.709	ENSACLG00000022779	si:rp71-84d19.3	93	82.331	Astatotilapia_calliptera
ENSCVAG00000008610	si:rp71-84d19.3	92	75.723	ENSAMXG00000014566	si:rp71-84d19.3	91	68.966	Astyanax_mexicanus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSBTAG00000006534	GTPBP8	90	59.615	Bos_taurus
ENSCVAG00000008610	si:rp71-84d19.3	93	69.143	ENSCJAG00000020325	GTPBP8	81	61.200	Callithrix_jacchus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSCAFG00000010557	GTPBP8	91	59.316	Canis_familiaris
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSCAFG00020007293	GTPBP8	91	59.316	Canis_lupus_dingo
ENSCVAG00000008610	si:rp71-84d19.3	91	69.186	ENSCHIG00000024798	GTPBP8	85	61.382	Capra_hircus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.006	ENSTSYG00000008331	GTPBP8	95	58.672	Carlito_syrichta
ENSCVAG00000008610	si:rp71-84d19.3	88	66.867	ENSCAPG00000005604	GTPBP8	97	66.867	Cavia_aperea
ENSCVAG00000008610	si:rp71-84d19.3	91	67.836	ENSCPOG00000004462	GTPBP8	87	57.937	Cavia_porcellus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.591	ENSCCAG00000016215	GTPBP8	99	69.591	Cebus_capucinus
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSCATG00000026978	GTPBP8	99	70.760	Cercocebus_atys
ENSCVAG00000008610	si:rp71-84d19.3	91	66.082	ENSCLAG00000008280	GTPBP8	87	56.746	Chinchilla_lanigera
ENSCVAG00000008610	si:rp71-84d19.3	91	71.345	ENSCSAG00000006667	GTPBP8	99	59.551	Chlorocebus_sabaeus
ENSCVAG00000008610	si:rp71-84d19.3	88	61.677	ENSCHOG00000009519	-	97	61.677	Choloepus_hoffmanni
ENSCVAG00000008610	si:rp71-84d19.3	94	68.750	ENSCPBG00000003342	GTPBP8	92	60.076	Chrysemys_picta_bellii
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSCANG00000015621	GTPBP8	99	70.760	Colobus_angolensis_palliatus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.186	ENSCGRG00001025024	Gtpbp8	87	62.348	Cricetulus_griseus_chok1gshd
ENSCVAG00000008610	si:rp71-84d19.3	91	69.186	ENSCGRG00000005605	Gtpbp8	89	62.348	Cricetulus_griseus_crigri
ENSCVAG00000008610	si:rp71-84d19.3	95	78.652	ENSCSEG00000015488	si:rp71-84d19.3	99	69.742	Cynoglossus_semilaevis
ENSCVAG00000008610	si:rp71-84d19.3	90	75.740	ENSDARG00000075033	GTPBP8	97	65.217	Danio_rerio
ENSCVAG00000008610	si:rp71-84d19.3	93	68.571	ENSDNOG00000002387	GTPBP8	92	59.023	Dasypus_novemcinctus
ENSCVAG00000008610	si:rp71-84d19.3	89	70.238	ENSDORG00000008910	Gtpbp8	84	66.848	Dipodomys_ordii
ENSCVAG00000008610	si:rp71-84d19.3	75	58.156	ENSETEG00000016754	GTPBP8	86	47.303	Echinops_telfairi
ENSCVAG00000008610	si:rp71-84d19.3	91	56.140	ENSEBUG00000004225	si:rp71-84d19.3	89	49.807	Eptatretus_burgeri
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSEASG00005011438	GTPBP8	95	57.818	Equus_asinus_asinus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSECAG00000012554	GTPBP8	95	57.818	Equus_caballus
ENSCVAG00000008610	si:rp71-84d19.3	90	57.059	ENSEEUG00000011408	GTPBP8	96	47.038	Erinaceus_europaeus
ENSCVAG00000008610	si:rp71-84d19.3	94	77.273	ENSELUG00000014421	si:rp71-84d19.3	92	71.154	Esox_lucius
ENSCVAG00000008610	si:rp71-84d19.3	91	70.175	ENSFCAG00000009098	GTPBP8	94	58.427	Felis_catus
ENSCVAG00000008610	si:rp71-84d19.3	91	73.684	ENSFALG00000005871	GTPBP8	97	61.004	Ficedula_albicollis
ENSCVAG00000008610	si:rp71-84d19.3	90	68.235	ENSFDAG00000016990	GTPBP8	94	61.803	Fukomys_damarensis
ENSCVAG00000008610	si:rp71-84d19.3	99	86.631	ENSFHEG00000007231	si:rp71-84d19.3	99	84.825	Fundulus_heteroclitus
ENSCVAG00000008610	si:rp71-84d19.3	91	80.814	ENSGMOG00000004456	si:rp71-84d19.3	96	68.657	Gadus_morhua
ENSCVAG00000008610	si:rp71-84d19.3	94	69.492	ENSGALG00000015190	GTPBP8	81	58.301	Gallus_gallus
ENSCVAG00000008610	si:rp71-84d19.3	95	87.079	ENSGAFG00000009736	si:rp71-84d19.3	98	87.079	Gambusia_affinis
ENSCVAG00000008610	si:rp71-84d19.3	91	83.140	ENSGACG00000001542	si:rp71-84d19.3	100	82.041	Gasterosteus_aculeatus
ENSCVAG00000008610	si:rp71-84d19.3	94	68.927	ENSGAGG00000024287	GTPBP8	100	68.927	Gopherus_agassizii
ENSCVAG00000008610	si:rp71-84d19.3	91	70.930	ENSGGOG00000009259	GTPBP8	99	70.930	Gorilla_gorilla
ENSCVAG00000008610	si:rp71-84d19.3	91	68.421	ENSHGLG00000018819	GTPBP8	82	66.292	Heterocephalus_glaber_female
ENSCVAG00000008610	si:rp71-84d19.3	91	68.421	ENSHGLG00100005474	GTPBP8	80	68.421	Heterocephalus_glaber_male
ENSCVAG00000008610	si:rp71-84d19.3	95	82.022	ENSHCOG00000008055	si:rp71-84d19.3	93	75.746	Hippocampus_comes
ENSCVAG00000008610	si:rp71-84d19.3	92	75.145	ENSIPUG00000023808	gtpbp8	98	66.547	Ictalurus_punctatus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.591	ENSSTOG00000002134	GTPBP8	86	63.008	Ictidomys_tridecemlineatus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.186	ENSJJAG00000011072	Gtpbp8	89	61.943	Jaculus_jaculus
ENSCVAG00000008610	si:rp71-84d19.3	94	89.266	ENSKMAG00000020114	si:rp71-84d19.3	94	82.734	Kryptolebias_marmoratus
ENSCVAG00000008610	si:rp71-84d19.3	95	83.799	ENSLBEG00000026954	si:rp71-84d19.3	93	80.075	Labrus_bergylta
ENSCVAG00000008610	si:rp71-84d19.3	92	73.410	ENSLACG00000007981	GTPBP8	98	64.479	Latimeria_chalumnae
ENSCVAG00000008610	si:rp71-84d19.3	95	73.596	ENSLOCG00000008641	si:rp71-84d19.3	80	67.176	Lepisosteus_oculatus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSLAFG00000009408	GTPBP8	89	61.538	Loxodonta_africana
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSMFAG00000045745	GTPBP8	99	70.760	Macaca_fascicularis
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSMMUG00000014874	GTPBP8	99	70.760	Macaca_mulatta
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSMNEG00000033476	GTPBP8	99	70.760	Macaca_nemestrina
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSMLEG00000036123	GTPBP8	99	70.760	Mandrillus_leucophaeus
ENSCVAG00000008610	si:rp71-84d19.3	95	84.358	ENSMAMG00000008709	si:rp71-84d19.3	91	82.890	Mastacembelus_armatus
ENSCVAG00000008610	si:rp71-84d19.3	95	88.268	ENSMZEG00005012995	si:rp71-84d19.3	93	82.707	Maylandia_zebra
ENSCVAG00000008610	si:rp71-84d19.3	91	70.175	ENSMGAG00000014337	GTPBP8	97	70.175	Meleagris_gallopavo
ENSCVAG00000008610	si:rp71-84d19.3	91	70.349	ENSMAUG00000000058	Gtpbp8	87	61.943	Mesocricetus_auratus
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSMICG00000048925	GTPBP8	99	70.760	Microcebus_murinus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.186	ENSMOCG00000016965	Gtpbp8	87	61.134	Microtus_ochrogaster
ENSCVAG00000008610	si:rp71-84d19.3	92	84.393	ENSMMOG00000019197	si:rp71-84d19.3	97	84.393	Mola_mola
ENSCVAG00000008610	si:rp71-84d19.3	91	70.349	ENSMODG00000018130	GTPBP8	97	59.559	Monodelphis_domestica
ENSCVAG00000008610	si:rp71-84d19.3	95	80.447	ENSMALG00000009362	si:rp71-84d19.3	98	76.703	Monopterus_albus
ENSCVAG00000008610	si:rp71-84d19.3	91	68.023	MGP_CAROLIEiJ_G0020770	Gtpbp8	82	65.922	Mus_caroli
ENSCVAG00000008610	si:rp71-84d19.3	91	68.023	ENSMUSG00000022668	Gtpbp8	87	61.134	Mus_musculus
ENSCVAG00000008610	si:rp71-84d19.3	91	68.605	MGP_PahariEiJ_G0016470	Gtpbp8	87	61.538	Mus_pahari
ENSCVAG00000008610	si:rp71-84d19.3	91	67.442	MGP_SPRETEiJ_G0021669	Gtpbp8	87	60.729	Mus_spretus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSMPUG00000000305	GTPBP8	92	57.353	Mustela_putorius_furo
ENSCVAG00000008610	si:rp71-84d19.3	91	70.930	ENSMLUG00000017729	GTPBP8	96	57.971	Myotis_lucifugus
ENSCVAG00000008610	si:rp71-84d19.3	91	68.605	ENSNGAG00000017687	Gtpbp8	93	60.227	Nannospalax_galili
ENSCVAG00000008610	si:rp71-84d19.3	91	70.175	ENSNLEG00000004407	GTPBP8	99	70.175	Nomascus_leucogenys
ENSCVAG00000008610	si:rp71-84d19.3	88	62.275	ENSMEUG00000005021	GTPBP8	98	50.174	Notamacropus_eugenii
ENSCVAG00000008610	si:rp71-84d19.3	88	61.677	ENSOPRG00000008882	GTPBP8	87	51.515	Ochotona_princeps
ENSCVAG00000008610	si:rp71-84d19.3	87	65.854	ENSODEG00000005162	GTPBP8	95	65.854	Octodon_degus
ENSCVAG00000008610	si:rp71-84d19.3	94	87.500	ENSONIG00000004479	si:rp71-84d19.3	100	83.399	Oreochromis_niloticus
ENSCVAG00000008610	si:rp71-84d19.3	91	66.860	ENSOANG00000003960	GTPBP8	99	63.033	Ornithorhynchus_anatinus
ENSCVAG00000008610	si:rp71-84d19.3	91	68.421	ENSOCUG00000010793	GTPBP8	93	57.721	Oryctolagus_cuniculus
ENSCVAG00000008610	si:rp71-84d19.3	94	75.706	ENSOMEG00000017933	si:rp71-84d19.3	96	69.455	Oryzias_melastigma
ENSCVAG00000008610	si:rp71-84d19.3	91	71.512	ENSOGAG00000002997	GTPBP8	87	62.903	Otolemur_garnettii
ENSCVAG00000008610	si:rp71-84d19.3	92	69.364	ENSOARG00000019364	GTPBP8	85	60.324	Ovis_aries
ENSCVAG00000008610	si:rp71-84d19.3	91	70.930	ENSPPAG00000033092	GTPBP8	99	70.930	Pan_paniscus
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSPPRG00000021797	GTPBP8	94	59.176	Panthera_pardus
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSPTIG00000019930	GTPBP8	94	59.176	Panthera_tigris_altaica
ENSCVAG00000008610	si:rp71-84d19.3	91	70.930	ENSPTRG00000015224	GTPBP8	99	70.930	Pan_troglodytes
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSPANG00000007139	GTPBP8	99	70.760	Papio_anubis
ENSCVAG00000008610	si:rp71-84d19.3	95	70.225	ENSPKIG00000013526	si:rp71-84d19.3	90	64.122	Paramormyrops_kingsleyae
ENSCVAG00000008610	si:rp71-84d19.3	94	68.750	ENSPSIG00000002264	GTPBP8	92	60.837	Pelodiscus_sinensis
ENSCVAG00000008610	si:rp71-84d19.3	79	79.866	ENSPMGG00000012449	si:rp71-84d19.3	91	78.205	Periophthalmus_magnuspinnatus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSPEMG00000014655	Gtpbp8	97	59.058	Peromyscus_maniculatus_bairdii
ENSCVAG00000008610	si:rp71-84d19.3	94	69.886	ENSPCIG00000019601	GTPBP8	91	60.465	Phascolarctos_cinereus
ENSCVAG00000008610	si:rp71-84d19.3	95	87.151	ENSPFOG00000016865	si:rp71-84d19.3	98	84.099	Poecilia_formosa
ENSCVAG00000008610	si:rp71-84d19.3	95	87.151	ENSPLAG00000008977	si:rp71-84d19.3	99	84.099	Poecilia_latipinna
ENSCVAG00000008610	si:rp71-84d19.3	95	87.151	ENSPMEG00000021981	si:rp71-84d19.3	99	84.099	Poecilia_mexicana
ENSCVAG00000008610	si:rp71-84d19.3	95	85.393	ENSPREG00000019094	si:rp71-84d19.3	98	85.393	Poecilia_reticulata
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSPPYG00000013543	GTPBP8	86	61.789	Pongo_abelii
ENSCVAG00000008610	si:rp71-84d19.3	88	60.843	ENSPCAG00000004162	GTPBP8	88	50.958	Procavia_capensis
ENSCVAG00000008610	si:rp71-84d19.3	88	60.714	ENSPVAG00000015965	GTPBP8	87	52.471	Pteropus_vampyrus
ENSCVAG00000008610	si:rp71-84d19.3	95	87.709	ENSPNYG00000016946	si:rp71-84d19.3	93	81.955	Pundamilia_nyererei
ENSCVAG00000008610	si:rp71-84d19.3	92	73.988	ENSPNAG00000024943	si:rp71-84d19.3	91	67.315	Pygocentrus_nattereri
ENSCVAG00000008610	si:rp71-84d19.3	91	68.605	ENSRNOG00000002044	Gtpbp8	87	61.538	Rattus_norvegicus
ENSCVAG00000008610	si:rp71-84d19.3	91	70.175	ENSRBIG00000040114	GTPBP8	96	67.262	Rhinopithecus_bieti
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSRROG00000016262	GTPBP8	86	62.602	Rhinopithecus_roxellana
ENSCVAG00000008610	si:rp71-84d19.3	94	67.614	ENSSBOG00000025468	GTPBP8	100	67.614	Saimiri_boliviensis_boliviensis
ENSCVAG00000008610	si:rp71-84d19.3	91	70.760	ENSSHAG00000002292	GTPBP8	87	57.551	Sarcophilus_harrisii
ENSCVAG00000008610	si:rp71-84d19.3	96	71.111	ENSSFOG00015013992	gtpbp8	92	65.789	Scleropages_formosus
ENSCVAG00000008610	si:rp71-84d19.3	98	78.378	ENSSMAG00000002103	si:rp71-84d19.3	91	77.695	Scophthalmus_maximus
ENSCVAG00000008610	si:rp71-84d19.3	95	84.358	ENSSDUG00000000998	si:rp71-84d19.3	99	77.817	Seriola_dumerili
ENSCVAG00000008610	si:rp71-84d19.3	96	82.222	ENSSLDG00000012459	si:rp71-84d19.3	100	82.222	Seriola_lalandi_dorsalis
ENSCVAG00000008610	si:rp71-84d19.3	92	72.254	ENSSPUG00000005036	GTPBP8	89	63.281	Sphenodon_punctatus
ENSCVAG00000008610	si:rp71-84d19.3	95	84.358	ENSSPAG00000012870	si:rp71-84d19.3	94	80.669	Stegastes_partitus
ENSCVAG00000008610	si:rp71-84d19.3	91	68.023	ENSSSCG00000036952	GTPBP8	90	59.350	Sus_scrofa
ENSCVAG00000008610	si:rp71-84d19.3	94	71.751	ENSTGUG00000013421	GTPBP8	97	60.000	Taeniopygia_guttata
ENSCVAG00000008610	si:rp71-84d19.3	95	82.682	ENSTRUG00000001494	si:rp71-84d19.3	98	77.224	Takifugu_rubripes
ENSCVAG00000008610	si:rp71-84d19.3	91	79.070	ENSTNIG00000017825	si:rp71-84d19.3	97	75.092	Tetraodon_nigroviridis
ENSCVAG00000008610	si:rp71-84d19.3	83	67.308	ENSUAMG00000011983	-	98	67.308	Ursus_americanus
ENSCVAG00000008610	si:rp71-84d19.3	83	67.308	ENSUMAG00000004565	-	98	67.308	Ursus_maritimus
ENSCVAG00000008610	si:rp71-84d19.3	91	69.767	ENSVVUG00000021995	GTPBP8	83	59.160	Vulpes_vulpes
ENSCVAG00000008610	si:rp71-84d19.3	90	74.118	ENSXETG00000016308	gtpbp8	87	66.800	Xenopus_tropicalis
ENSCVAG00000008610	si:rp71-84d19.3	95	87.079	ENSXCOG00000014591	si:rp71-84d19.3	98	87.079	Xiphophorus_couchianus
ENSCVAG00000008610	si:rp71-84d19.3	95	86.592	ENSXMAG00000004437	si:rp71-84d19.3	99	84.452	Xiphophorus_maculatus