EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000008761 (Gene tree)
Gene ID: 107103113
Gene Symbol: rpusd4 (1 of many)
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6873 bases
Position: chrKL653877.1:160700-167572
Accession: 107103113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007135	PseudoU_synth_2	PF00849.22	3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003803	-	2584	XM_015402641	ENSCVAP00000007135	390 (aa)	XP_015258127	UPI000742AD0F

Gene Model

Click here to download ENSCVAG00000008761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000008761	rpusd4	99	98.972	ENSCVAG00000000392	rpusd4	100	98.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008761	rpusd4	83	51.070	ENSG00000165526	RPUSD4	87	50.602	Homo_sapiens
ENSCVAG00000008761	rpusd4	100	68.528	ENSAPOG00000011024	rpusd4	98	68.528	Acanthochromis_polyacanthus
ENSCVAG00000008761	rpusd4	92	48.753	ENSAMEG00000000127	-	85	51.227	Ailuropoda_melanoleuca
ENSCVAG00000008761	rpusd4	60	57.000	ENSAMEG00000005953	-	95	57.000	Ailuropoda_melanoleuca
ENSCVAG00000008761	rpusd4	84	72.699	ENSACIG00000003533	rpusd4	96	72.699	Amphilophus_citrinellus
ENSCVAG00000008761	rpusd4	99	68.702	ENSAOCG00000015409	rpusd4	97	68.702	Amphiprion_ocellaris
ENSCVAG00000008761	rpusd4	99	68.702	ENSAPEG00000018935	rpusd4	97	68.702	Amphiprion_percula
ENSCVAG00000008761	rpusd4	99	68.020	ENSATEG00000008059	rpusd4	97	68.020	Anabas_testudineus
ENSCVAG00000008761	rpusd4	72	53.546	ENSAPLG00000013250	RPUSD4	96	53.004	Anas_platyrhynchos
ENSCVAG00000008761	rpusd4	83	51.976	ENSACAG00000000189	RPUSD4	89	51.976	Anolis_carolinensis
ENSCVAG00000008761	rpusd4	86	48.817	ENSANAG00000024050	RPUSD4	89	48.817	Aotus_nancymaae
ENSCVAG00000008761	rpusd4	97	71.429	ENSACLG00000020996	rpusd4	96	71.429	Astatotilapia_calliptera
ENSCVAG00000008761	rpusd4	86	59.884	ENSAMXG00000031479	rpusd4	93	61.515	Astyanax_mexicanus
ENSCVAG00000008761	rpusd4	84	50.602	ENSBTAG00000020900	RPUSD4	86	50.602	Bos_taurus
ENSCVAG00000008761	rpusd4	84	49.096	ENSCJAG00000042850	RPUSD4	82	49.096	Callithrix_jacchus
ENSCVAG00000008761	rpusd4	88	51.156	ENSCAFG00000010488	RPUSD4	86	52.568	Canis_familiaris
ENSCVAG00000008761	rpusd4	88	51.156	ENSCAFG00020010621	RPUSD4	86	52.568	Canis_lupus_dingo
ENSCVAG00000008761	rpusd4	83	50.000	ENSCHIG00000009975	RPUSD4	86	49.699	Capra_hircus
ENSCVAG00000008761	rpusd4	92	50.000	ENSTSYG00000008456	RPUSD4	89	51.183	Carlito_syrichta
ENSCVAG00000008761	rpusd4	62	48.571	ENSCAPG00000006040	RPUSD4	93	48.571	Cavia_aperea
ENSCVAG00000008761	rpusd4	86	51.183	ENSCPOG00000014971	RPUSD4	88	51.183	Cavia_porcellus
ENSCVAG00000008761	rpusd4	86	48.974	ENSCCAG00000027838	RPUSD4	90	48.974	Cebus_capucinus
ENSCVAG00000008761	rpusd4	92	46.685	ENSCATG00000041570	RPUSD4	88	47.929	Cercocebus_atys
ENSCVAG00000008761	rpusd4	86	51.929	ENSCLAG00000016553	RPUSD4	88	51.929	Chinchilla_lanigera
ENSCVAG00000008761	rpusd4	83	49.541	ENSCSAG00000002274	RPUSD4	88	48.521	Chlorocebus_sabaeus
ENSCVAG00000008761	rpusd4	69	52.574	ENSCHOG00000010249	RPUSD4	94	52.574	Choloepus_hoffmanni
ENSCVAG00000008761	rpusd4	73	56.401	ENSCPBG00000011175	RPUSD4	99	56.401	Chrysemys_picta_bellii
ENSCVAG00000008761	rpusd4	85	35.817	ENSCSAVG00000000872	-	63	36.527	Ciona_savignyi
ENSCVAG00000008761	rpusd4	93	47.253	ENSCANG00000039684	RPUSD4	88	48.521	Colobus_angolensis_palliatus
ENSCVAG00000008761	rpusd4	93	49.451	ENSCGRG00001024141	Rpusd4	91	49.451	Cricetulus_griseus_chok1gshd
ENSCVAG00000008761	rpusd4	93	49.451	ENSCGRG00000014415	Rpusd4	91	49.451	Cricetulus_griseus_crigri
ENSCVAG00000008761	rpusd4	90	55.114	ENSDARG00000012674	rpusd4	90	58.642	Danio_rerio
ENSCVAG00000008761	rpusd4	86	49.558	ENSDNOG00000020026	RPUSD4	87	50.150	Dasypus_novemcinctus
ENSCVAG00000008761	rpusd4	86	49.555	ENSDORG00000016717	Rpusd4	88	49.555	Dipodomys_ordii
ENSCVAG00000008761	rpusd4	86	50.737	ENSETEG00000013953	RPUSD4	89	50.737	Echinops_telfairi
ENSCVAG00000008761	rpusd4	86	50.148	ENSEASG00005022982	RPUSD4	88	50.148	Equus_asinus_asinus
ENSCVAG00000008761	rpusd4	86	50.445	ENSECAG00000000557	RPUSD4	88	50.445	Equus_caballus
ENSCVAG00000008761	rpusd4	66	56.906	ENSEEUG00000014036	RPUSD4	68	56.593	Erinaceus_europaeus
ENSCVAG00000008761	rpusd4	91	57.104	ENSELUG00000008075	rpusd4	91	59.195	Esox_lucius
ENSCVAG00000008761	rpusd4	88	49.856	ENSFCAG00000029789	RPUSD4	86	51.057	Felis_catus
ENSCVAG00000008761	rpusd4	83	51.227	ENSFALG00000005171	RPUSD4	96	51.227	Ficedula_albicollis
ENSCVAG00000008761	rpusd4	86	50.000	ENSFDAG00000014307	RPUSD4	89	50.000	Fukomys_damarensis
ENSCVAG00000008761	rpusd4	99	80.720	ENSFHEG00000004329	rpusd4	100	80.720	Fundulus_heteroclitus
ENSCVAG00000008761	rpusd4	84	63.914	ENSGMOG00000017726	rpusd4	99	63.174	Gadus_morhua
ENSCVAG00000008761	rpusd4	72	56.491	ENSGALG00000024326	RPUSD4	94	51.183	Gallus_gallus
ENSCVAG00000008761	rpusd4	99	77.099	ENSGAFG00000021559	rpusd4	100	77.099	Gambusia_affinis
ENSCVAG00000008761	rpusd4	86	71.810	ENSGACG00000001657	rpusd4	98	74.643	Gasterosteus_aculeatus
ENSCVAG00000008761	rpusd4	90	52.247	ENSGAGG00000000132	RPUSD4	89	54.740	Gopherus_agassizii
ENSCVAG00000008761	rpusd4	83	51.070	ENSGGOG00000016494	RPUSD4	87	50.602	Gorilla_gorilla
ENSCVAG00000008761	rpusd4	97	71.429	ENSHBUG00000022838	rpusd4	96	71.429	Haplochromis_burtoni
ENSCVAG00000008761	rpusd4	86	50.296	ENSHGLG00000002285	RPUSD4	88	50.296	Heterocephalus_glaber_female
ENSCVAG00000008761	rpusd4	86	50.296	ENSHGLG00100006385	RPUSD4	88	50.296	Heterocephalus_glaber_male
ENSCVAG00000008761	rpusd4	99	65.217	ENSHCOG00000006612	rpusd4	86	70.920	Hippocampus_comes
ENSCVAG00000008761	rpusd4	91	58.028	ENSIPUG00000023879	rusd4	84	60.736	Ictalurus_punctatus
ENSCVAG00000008761	rpusd4	84	52.410	ENSSTOG00000025280	RPUSD4	90	52.410	Ictidomys_tridecemlineatus
ENSCVAG00000008761	rpusd4	84	50.000	ENSJJAG00000018673	Rpusd4	89	50.000	Jaculus_jaculus
ENSCVAG00000008761	rpusd4	99	68.182	ENSKMAG00000021805	rpusd4	100	68.182	Kryptolebias_marmoratus
ENSCVAG00000008761	rpusd4	99	63.524	ENSLBEG00000020394	rpusd4	94	72.836	Labrus_bergylta
ENSCVAG00000008761	rpusd4	83	55.183	ENSLACG00000011028	RPUSD4	82	55.183	Latimeria_chalumnae
ENSCVAG00000008761	rpusd4	85	47.181	ENSLOCG00000003124	rpusd4	89	47.181	Lepisosteus_oculatus
ENSCVAG00000008761	rpusd4	84	51.205	ENSLAFG00000005211	RPUSD4	100	44.068	Loxodonta_africana
ENSCVAG00000008761	rpusd4	92	47.238	ENSMFAG00000039513	RPUSD4	88	48.521	Macaca_fascicularis
ENSCVAG00000008761	rpusd4	92	46.961	ENSMMUG00000007933	RPUSD4	88	48.225	Macaca_mulatta
ENSCVAG00000008761	rpusd4	92	47.514	ENSMNEG00000027414	RPUSD4	88	48.817	Macaca_nemestrina
ENSCVAG00000008761	rpusd4	83	50.307	ENSMLEG00000042461	RPUSD4	88	49.258	Mandrillus_leucophaeus
ENSCVAG00000008761	rpusd4	100	66.667	ENSMAMG00000023839	rpusd4	100	66.667	Mastacembelus_armatus
ENSCVAG00000008761	rpusd4	97	71.429	ENSMZEG00005011999	rpusd4	96	71.429	Maylandia_zebra
ENSCVAG00000008761	rpusd4	72	53.710	ENSMGAG00000000840	RPUSD4	99	50.760	Meleagris_gallopavo
ENSCVAG00000008761	rpusd4	93	48.901	ENSMAUG00000010280	Rpusd4	88	50.592	Mesocricetus_auratus
ENSCVAG00000008761	rpusd4	86	50.148	ENSMICG00000015979	RPUSD4	97	50.920	Microcebus_murinus
ENSCVAG00000008761	rpusd4	91	48.603	ENSMOCG00000000661	Rpusd4	86	50.151	Microtus_ochrogaster
ENSCVAG00000008761	rpusd4	80	73.955	ENSMMOG00000021731	rpusd4	93	73.955	Mola_mola
ENSCVAG00000008761	rpusd4	81	53.459	ENSMODG00000004521	RPUSD4	80	53.459	Monodelphis_domestica
ENSCVAG00000008761	rpusd4	79	73.052	ENSMALG00000005839	rpusd4	97	71.384	Monopterus_albus
ENSCVAG00000008761	rpusd4	86	49.704	MGP_CAROLIEiJ_G0031954	Rpusd4	88	49.704	Mus_caroli
ENSCVAG00000008761	rpusd4	86	50.296	ENSMUSG00000032044	Rpusd4	88	50.296	Mus_musculus
ENSCVAG00000008761	rpusd4	86	49.704	MGP_PahariEiJ_G0014819	Rpusd4	88	49.704	Mus_pahari
ENSCVAG00000008761	rpusd4	86	50.000	MGP_SPRETEiJ_G0033078	Rpusd4	88	50.000	Mus_spretus
ENSCVAG00000008761	rpusd4	88	49.711	ENSMPUG00000006608	RPUSD4	87	51.057	Mustela_putorius_furo
ENSCVAG00000008761	rpusd4	84	51.360	ENSMLUG00000017328	-	85	51.360	Myotis_lucifugus
ENSCVAG00000008761	rpusd4	65	51.953	ENSMLUG00000029348	-	99	51.953	Myotis_lucifugus
ENSCVAG00000008761	rpusd4	86	51.453	ENSNGAG00000020847	Rpusd4	90	51.453	Nannospalax_galili
ENSCVAG00000008761	rpusd4	86	75.000	ENSNBRG00000005207	rpusd4	97	75.000	Neolamprologus_brichardi
ENSCVAG00000008761	rpusd4	93	48.352	ENSNLEG00000007465	RPUSD4	88	49.704	Nomascus_leucogenys
ENSCVAG00000008761	rpusd4	83	52.744	ENSMEUG00000004370	RPUSD4	87	52.744	Notamacropus_eugenii
ENSCVAG00000008761	rpusd4	86	50.148	ENSODEG00000004577	RPUSD4	88	50.148	Octodon_degus
ENSCVAG00000008761	rpusd4	97	71.958	ENSONIG00000018879	rpusd4	96	71.958	Oreochromis_niloticus
ENSCVAG00000008761	rpusd4	75	50.502	ENSOANG00000007247	RPUSD4	95	50.331	Ornithorhynchus_anatinus
ENSCVAG00000008761	rpusd4	86	51.471	ENSOCUG00000017039	RPUSD4	89	51.471	Oryctolagus_cuniculus
ENSCVAG00000008761	rpusd4	92	68.333	ENSORLG00000002750	rpusd4	91	70.732	Oryzias_latipes
ENSCVAG00000008761	rpusd4	93	68.493	ENSORLG00020002044	rpusd4	90	68.493	Oryzias_latipes_hni
ENSCVAG00000008761	rpusd4	93	67.857	ENSORLG00015020034	rpusd4	85	70.000	Oryzias_latipes_hsok
ENSCVAG00000008761	rpusd4	93	71.823	ENSOMEG00000004861	rpusd4	84	73.824	Oryzias_melastigma
ENSCVAG00000008761	rpusd4	83	52.454	ENSOGAG00000008922	RPUSD4	86	52.266	Otolemur_garnettii
ENSCVAG00000008761	rpusd4	83	50.307	ENSOARG00000012238	RPUSD4	86	50.000	Ovis_aries
ENSCVAG00000008761	rpusd4	83	51.070	ENSPPAG00000042883	RPUSD4	81	50.602	Pan_paniscus
ENSCVAG00000008761	rpusd4	83	51.840	ENSPPRG00000003081	RPUSD4	86	51.057	Panthera_pardus
ENSCVAG00000008761	rpusd4	83	51.840	ENSPTIG00000012059	RPUSD4	88	51.757	Panthera_tigris_altaica
ENSCVAG00000008761	rpusd4	83	51.070	ENSPTRG00000004454	RPUSD4	87	50.602	Pan_troglodytes
ENSCVAG00000008761	rpusd4	92	47.238	ENSPANG00000015040	RPUSD4	88	48.521	Papio_anubis
ENSCVAG00000008761	rpusd4	98	54.315	ENSPKIG00000023986	rpusd4	84	60.843	Paramormyrops_kingsleyae
ENSCVAG00000008761	rpusd4	77	55.116	ENSPSIG00000014268	RPUSD4	95	55.116	Pelodiscus_sinensis
ENSCVAG00000008761	rpusd4	96	63.395	ENSPMGG00000002806	rpusd4	92	67.674	Periophthalmus_magnuspinnatus
ENSCVAG00000008761	rpusd4	86	45.266	ENSPEMG00000000278	Rpusd4	87	45.266	Peromyscus_maniculatus_bairdii
ENSCVAG00000008761	rpusd4	80	39.766	ENSPMAG00000008183	rpusd4	99	39.766	Petromyzon_marinus
ENSCVAG00000008761	rpusd4	85	53.153	ENSPCIG00000010212	RPUSD4	90	53.153	Phascolarctos_cinereus
ENSCVAG00000008761	rpusd4	96	78.534	ENSPFOG00000019030	rpusd4	100	78.534	Poecilia_formosa
ENSCVAG00000008761	rpusd4	99	78.117	ENSPLAG00000016848	rpusd4	100	78.117	Poecilia_latipinna
ENSCVAG00000008761	rpusd4	99	77.608	ENSPMEG00000017534	rpusd4	100	77.608	Poecilia_mexicana
ENSCVAG00000008761	rpusd4	95	77.212	ENSPREG00000005689	rpusd4	96	77.212	Poecilia_reticulata
ENSCVAG00000008761	rpusd4	88	48.563	ENSPPYG00000004043	RPUSD4	87	49.699	Pongo_abelii
ENSCVAG00000008761	rpusd4	65	56.044	ENSPCAG00000000753	RPUSD4	70	56.044	Procavia_capensis
ENSCVAG00000008761	rpusd4	86	47.917	ENSPCOG00000020694	RPUSD4	89	47.917	Propithecus_coquereli
ENSCVAG00000008761	rpusd4	86	50.592	ENSPVAG00000000988	RPUSD4	89	50.592	Pteropus_vampyrus
ENSCVAG00000008761	rpusd4	97	71.429	ENSPNYG00000009652	rpusd4	96	71.429	Pundamilia_nyererei
ENSCVAG00000008761	rpusd4	89	58.046	ENSPNAG00000012264	rpusd4	86	59.939	Pygocentrus_nattereri
ENSCVAG00000008761	rpusd4	95	47.861	ENSRNOG00000011567	Rpusd4	93	47.861	Rattus_norvegicus
ENSCVAG00000008761	rpusd4	91	47.486	ENSRBIG00000034842	RPUSD4	88	48.225	Rhinopithecus_bieti
ENSCVAG00000008761	rpusd4	91	47.486	ENSRROG00000039753	RPUSD4	88	48.225	Rhinopithecus_roxellana
ENSCVAG00000008761	rpusd4	86	48.817	ENSSBOG00000030413	RPUSD4	89	48.817	Saimiri_boliviensis_boliviensis
ENSCVAG00000008761	rpusd4	77	54.455	ENSSHAG00000008304	RPUSD4	99	54.455	Sarcophilus_harrisii
ENSCVAG00000008761	rpusd4	83	58.182	ENSSFOG00015006203	rpusd4	89	58.485	Scleropages_formosus
ENSCVAG00000008761	rpusd4	99	65.228	ENSSMAG00000020978	rpusd4	100	64.975	Scophthalmus_maximus
ENSCVAG00000008761	rpusd4	96	69.415	ENSSDUG00000013399	rpusd4	96	69.149	Seriola_dumerili
ENSCVAG00000008761	rpusd4	96	69.681	ENSSLDG00000023507	rpusd4	96	69.415	Seriola_lalandi_dorsalis
ENSCVAG00000008761	rpusd4	93	50.546	ENSSPUG00000001401	RPUSD4	90	54.573	Sphenodon_punctatus
ENSCVAG00000008761	rpusd4	99	67.595	ENSSPAG00000012163	rpusd4	100	67.595	Stegastes_partitus
ENSCVAG00000008761	rpusd4	86	49.258	ENSSSCG00000015233	RPUSD4	88	49.258	Sus_scrofa
ENSCVAG00000008761	rpusd4	77	54.000	ENSTGUG00000000773	RPUSD4	99	54.000	Taeniopygia_guttata
ENSCVAG00000008761	rpusd4	98	62.725	ENSTRUG00000012283	rpusd4	98	62.597	Takifugu_rubripes
ENSCVAG00000008761	rpusd4	98	64.599	ENSTNIG00000014676	rpusd4	98	64.599	Tetraodon_nigroviridis
ENSCVAG00000008761	rpusd4	94	47.568	ENSTTRG00000001555	RPUSD4	88	50.148	Tursiops_truncatus
ENSCVAG00000008761	rpusd4	92	49.307	ENSUMAG00000002219	RPUSD4	85	51.840	Ursus_maritimus
ENSCVAG00000008761	rpusd4	56	48.182	ENSVPAG00000001066	RPUSD4	87	47.881	Vicugna_pacos
ENSCVAG00000008761	rpusd4	88	50.867	ENSVVUG00000020101	RPUSD4	86	52.266	Vulpes_vulpes
ENSCVAG00000008761	rpusd4	99	78.117	ENSXCOG00000004676	rpusd4	100	78.117	Xiphophorus_couchianus
ENSCVAG00000008761	rpusd4	99	78.117	ENSXMAG00000023351	rpusd4	100	78.117	Xiphophorus_maculatus