EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000008795 (Gene tree)
Gene ID: 107082143
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 21097 bases
Position: chrKL652502.1:3242671-3263767
Accession: 107082143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007067	MIF4G_like	PF09088.11	3.4e-37	1	1
ENSCVAP00000024554	MIF4G_like	PF09088.11	3.5e-37	1	1
ENSCVAP00000007067	MIF4G_like_2	PF09090.11	2.9e-87	1	1
ENSCVAP00000024554	MIF4G_like_2	PF09090.11	9.3e-86	1	1
ENSCVAP00000007067	MIF4G	PF02854.19	9.7e-28	1	1
ENSCVAP00000024554	MIF4G	PF02854.19	1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003925	NCBP1-202	2391	XM_015370665	ENSCVAP00000007067	796 (aa)	XP_015226151	UPI00074294C0
ENSCVAT00000003886	NCBP1-201	3422	-	ENSCVAP00000024554	813 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000008795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008795	NCBP1	99	81.509	ENSG00000136937	NCBP1	99	80.881	Homo_sapiens
ENSCVAG00000008795	NCBP1	100	95.101	ENSAPOG00000008002	NCBP1	100	95.101	Acanthochromis_polyacanthus
ENSCVAG00000008795	NCBP1	99	81.681	ENSAMEG00000004763	NCBP1	99	81.054	Ailuropoda_melanoleuca
ENSCVAG00000008795	NCBP1	100	94.849	ENSACIG00000000274	NCBP1	100	94.849	Amphilophus_citrinellus
ENSCVAG00000008795	NCBP1	100	94.975	ENSAOCG00000021148	NCBP1	100	94.975	Amphiprion_ocellaris
ENSCVAG00000008795	NCBP1	100	94.975	ENSAPEG00000001701	NCBP1	100	94.975	Amphiprion_percula
ENSCVAG00000008795	NCBP1	100	95.477	ENSATEG00000006929	NCBP1	100	95.477	Anabas_testudineus
ENSCVAG00000008795	NCBP1	95	81.997	ENSAPLG00000016318	NCBP1	99	81.472	Anas_platyrhynchos
ENSCVAG00000008795	NCBP1	99	82.397	ENSACAG00000004409	NCBP1	87	81.773	Anolis_carolinensis
ENSCVAG00000008795	NCBP1	99	79.497	ENSANAG00000025744	NCBP1	99	80.303	Aotus_nancymaae
ENSCVAG00000008795	NCBP1	100	94.347	ENSACLG00000014812	NCBP1	100	94.347	Astatotilapia_calliptera
ENSCVAG00000008795	NCBP1	100	90.715	ENSAMXG00000016364	NCBP1	100	90.715	Astyanax_mexicanus
ENSCVAG00000008795	NCBP1	99	81.635	ENSBTAG00000009732	NCBP1	99	86.707	Bos_taurus
ENSCVAG00000008795	NCBP1	100	35.670	WBGene00018156	ncbp-1	100	35.417	Caenorhabditis_elegans
ENSCVAG00000008795	NCBP1	99	81.635	ENSCJAG00000010840	NCBP1	99	85.463	Callithrix_jacchus
ENSCVAG00000008795	NCBP1	99	81.761	ENSCAFG00000002445	NCBP1	99	81.132	Canis_familiaris
ENSCVAG00000008795	NCBP1	98	81.481	ENSCAFG00020017997	NCBP1	96	87.562	Canis_lupus_dingo
ENSCVAG00000008795	NCBP1	99	81.509	ENSCHIG00000020139	NCBP1	99	80.881	Capra_hircus
ENSCVAG00000008795	NCBP1	51	87.065	ENSTSYG00000011914	NCBP1	98	85.893	Carlito_syrichta
ENSCVAG00000008795	NCBP1	81	74.034	ENSCAPG00000014252	NCBP1	90	72.643	Cavia_aperea
ENSCVAG00000008795	NCBP1	95	80.871	ENSCPOG00000012573	NCBP1	98	80.211	Cavia_porcellus
ENSCVAG00000008795	NCBP1	99	81.509	ENSCCAG00000032297	NCBP1	99	80.881	Cebus_capucinus
ENSCVAG00000008795	NCBP1	99	81.509	ENSCATG00000010052	NCBP1	99	80.881	Cercocebus_atys
ENSCVAG00000008795	NCBP1	99	81.509	ENSCLAG00000014339	NCBP1	99	80.881	Chinchilla_lanigera
ENSCVAG00000008795	NCBP1	99	81.509	ENSCSAG00000010929	NCBP1	99	80.881	Chlorocebus_sabaeus
ENSCVAG00000008795	NCBP1	89	81.905	ENSCHOG00000010332	NCBP1	91	75.630	Choloepus_hoffmanni
ENSCVAG00000008795	NCBP1	99	80.881	ENSCPBG00000024344	NCBP1	99	81.818	Chrysemys_picta_bellii
ENSCVAG00000008795	NCBP1	99	54.717	ENSCING00000008990	-	99	54.717	Ciona_intestinalis
ENSCVAG00000008795	NCBP1	99	53.808	ENSCSAVG00000005300	-	99	53.333	Ciona_savignyi
ENSCVAG00000008795	NCBP1	99	81.509	ENSCANG00000036913	NCBP1	99	80.881	Colobus_angolensis_palliatus
ENSCVAG00000008795	NCBP1	99	81.132	ENSCGRG00001015771	Ncbp1	99	80.503	Cricetulus_griseus_chok1gshd
ENSCVAG00000008795	NCBP1	99	81.019	ENSCGRG00000010311	Ncbp1	99	80.382	Cricetulus_griseus_crigri
ENSCVAG00000008795	NCBP1	100	93.593	ENSCSEG00000012377	NCBP1	100	93.593	Cynoglossus_semilaevis
ENSCVAG00000008795	NCBP1	99	81.006	ENSDNOG00000006885	NCBP1	99	80.377	Dasypus_novemcinctus
ENSCVAG00000008795	NCBP1	99	77.597	ENSDORG00000013652	Ncbp1	99	76.971	Dipodomys_ordii
ENSCVAG00000008795	NCBP1	82	33.432	FBgn0038887	CG7907	87	33.432	Drosophila_melanogaster
ENSCVAG00000008795	NCBP1	99	56.489	FBgn0022942	Cbp80	99	57.196	Drosophila_melanogaster
ENSCVAG00000008795	NCBP1	89	77.754	ENSETEG00000009705	NCBP1	89	75.810	Echinops_telfairi
ENSCVAG00000008795	NCBP1	99	72.739	ENSEBUG00000008386	NCBP1	99	72.739	Eptatretus_burgeri
ENSCVAG00000008795	NCBP1	99	81.258	ENSEASG00005022795	NCBP1	99	80.629	Equus_asinus_asinus
ENSCVAG00000008795	NCBP1	99	81.384	ENSECAG00000013847	NCBP1	99	80.755	Equus_caballus
ENSCVAG00000008795	NCBP1	95	77.573	ENSEEUG00000015973	NCBP1	99	76.913	Erinaceus_europaeus
ENSCVAG00000008795	NCBP1	100	90.590	ENSELUG00000022519	NCBP1	100	90.590	Esox_lucius
ENSCVAG00000008795	NCBP1	99	81.635	ENSFCAG00000001206	NCBP1	99	81.006	Felis_catus
ENSCVAG00000008795	NCBP1	98	83.206	ENSFALG00000001193	NCBP1	99	82.443	Ficedula_albicollis
ENSCVAG00000008795	NCBP1	99	81.258	ENSFDAG00000010864	NCBP1	99	80.629	Fukomys_damarensis
ENSCVAG00000008795	NCBP1	100	97.990	ENSFHEG00000000655	NCBP1	100	97.990	Fundulus_heteroclitus
ENSCVAG00000008795	NCBP1	100	90.088	ENSGMOG00000008653	NCBP1	99	90.088	Gadus_morhua
ENSCVAG00000008795	NCBP1	98	82.886	ENSGALG00000002087	NCBP1	99	82.183	Gallus_gallus
ENSCVAG00000008795	NCBP1	100	96.985	ENSGAFG00000017787	NCBP1	100	96.985	Gambusia_affinis
ENSCVAG00000008795	NCBP1	100	92.491	ENSGACG00000016772	NCBP1	99	92.491	Gasterosteus_aculeatus
ENSCVAG00000008795	NCBP1	99	83.145	ENSGAGG00000019483	NCBP1	99	82.390	Gopherus_agassizii
ENSCVAG00000008795	NCBP1	99	81.509	ENSGGOG00000001376	NCBP1	99	80.881	Gorilla_gorilla
ENSCVAG00000008795	NCBP1	100	94.347	ENSHBUG00000020843	NCBP1	100	94.347	Haplochromis_burtoni
ENSCVAG00000008795	NCBP1	99	81.384	ENSHGLG00000001882	NCBP1	99	80.755	Heterocephalus_glaber_female
ENSCVAG00000008795	NCBP1	99	71.518	ENSHGLG00000018112	-	99	70.389	Heterocephalus_glaber_female
ENSCVAG00000008795	NCBP1	99	81.384	ENSHGLG00100013014	NCBP1	99	80.755	Heterocephalus_glaber_male
ENSCVAG00000008795	NCBP1	99	71.267	ENSHGLG00100017373	-	99	70.138	Heterocephalus_glaber_male
ENSCVAG00000008795	NCBP1	74	86.700	ENSHCOG00000000204	NCBP1	87	86.700	Hippocampus_comes
ENSCVAG00000008795	NCBP1	100	89.711	ENSIPUG00000007275	ncbp1	100	89.711	Ictalurus_punctatus
ENSCVAG00000008795	NCBP1	99	81.635	ENSSTOG00000002695	NCBP1	99	81.006	Ictidomys_tridecemlineatus
ENSCVAG00000008795	NCBP1	100	95.603	ENSKMAG00000003594	NCBP1	100	95.603	Kryptolebias_marmoratus
ENSCVAG00000008795	NCBP1	100	93.556	ENSLBEG00000011661	NCBP1	100	93.556	Labrus_bergylta
ENSCVAG00000008795	NCBP1	99	76.463	ENSLACG00000013955	NCBP1	99	77.019	Latimeria_chalumnae
ENSCVAG00000008795	NCBP1	99	76.617	ENSLOCG00000009579	NCBP1	99	76.368	Lepisosteus_oculatus
ENSCVAG00000008795	NCBP1	99	81.384	ENSLAFG00000005999	NCBP1	99	80.755	Loxodonta_africana
ENSCVAG00000008795	NCBP1	99	81.509	ENSMFAG00000030994	NCBP1	99	80.881	Macaca_fascicularis
ENSCVAG00000008795	NCBP1	98	81.250	ENSMMUG00000012281	NCBP1	99	80.612	Macaca_mulatta
ENSCVAG00000008795	NCBP1	99	81.509	ENSMNEG00000042790	NCBP1	99	80.881	Macaca_nemestrina
ENSCVAG00000008795	NCBP1	99	81.509	ENSMLEG00000030374	NCBP1	99	80.881	Mandrillus_leucophaeus
ENSCVAG00000008795	NCBP1	100	94.598	ENSMAMG00000014806	NCBP1	100	94.598	Mastacembelus_armatus
ENSCVAG00000008795	NCBP1	100	94.347	ENSMZEG00005003469	NCBP1	100	94.347	Maylandia_zebra
ENSCVAG00000008795	NCBP1	97	92.129	ENSMZEG00005009290	-	100	92.129	Maylandia_zebra
ENSCVAG00000008795	NCBP1	99	80.531	ENSMAUG00000020583	Ncbp1	99	79.899	Mesocricetus_auratus
ENSCVAG00000008795	NCBP1	99	81.006	ENSMICG00000012682	NCBP1	99	80.377	Microcebus_murinus
ENSCVAG00000008795	NCBP1	99	81.006	ENSMOCG00000015818	Ncbp1	99	80.377	Microtus_ochrogaster
ENSCVAG00000008795	NCBP1	91	91.967	ENSMMOG00000002610	NCBP1	100	91.967	Mola_mola
ENSCVAG00000008795	NCBP1	99	81.006	ENSMODG00000003202	NCBP1	99	80.377	Monodelphis_domestica
ENSCVAG00000008795	NCBP1	100	94.724	ENSMALG00000003547	NCBP1	100	94.724	Monopterus_albus
ENSCVAG00000008795	NCBP1	99	81.509	MGP_CAROLIEiJ_G0025982	Ncbp1	99	80.881	Mus_caroli
ENSCVAG00000008795	NCBP1	99	81.509	ENSMUSG00000028330	Ncbp1	99	80.881	Mus_musculus
ENSCVAG00000008795	NCBP1	99	81.509	MGP_PahariEiJ_G0028318	Ncbp1	99	80.881	Mus_pahari
ENSCVAG00000008795	NCBP1	99	81.509	MGP_SPRETEiJ_G0026945	Ncbp1	99	80.881	Mus_spretus
ENSCVAG00000008795	NCBP1	99	81.887	ENSMPUG00000006399	NCBP1	99	81.258	Mustela_putorius_furo
ENSCVAG00000008795	NCBP1	98	80.612	ENSMLUG00000015201	NCBP1	99	79.974	Myotis_lucifugus
ENSCVAG00000008795	NCBP1	99	82.013	ENSNGAG00000014101	Ncbp1	99	80.881	Nannospalax_galili
ENSCVAG00000008795	NCBP1	78	96.916	ENSNBRG00000014674	NCBP1	98	96.916	Neolamprologus_brichardi
ENSCVAG00000008795	NCBP1	99	81.509	ENSNLEG00000016909	NCBP1	99	80.881	Nomascus_leucogenys
ENSCVAG00000008795	NCBP1	89	79.749	ENSMEUG00000010672	NCBP1	90	79.749	Notamacropus_eugenii
ENSCVAG00000008795	NCBP1	84	73.782	ENSOPRG00000002144	-	88	72.941	Ochotona_princeps
ENSCVAG00000008795	NCBP1	99	81.384	ENSODEG00000003232	NCBP1	99	80.755	Octodon_degus
ENSCVAG00000008795	NCBP1	100	94.724	ENSONIG00000001502	NCBP1	100	94.724	Oreochromis_niloticus
ENSCVAG00000008795	NCBP1	78	84.109	ENSOANG00000001918	NCBP1	100	84.109	Ornithorhynchus_anatinus
ENSCVAG00000008795	NCBP1	98	81.050	ENSOCUG00000013853	NCBP1	97	80.410	Oryctolagus_cuniculus
ENSCVAG00000008795	NCBP1	100	95.125	ENSORLG00000011008	NCBP1	100	95.125	Oryzias_latipes
ENSCVAG00000008795	NCBP1	100	95.125	ENSORLG00020017455	NCBP1	100	95.125	Oryzias_latipes_hni
ENSCVAG00000008795	NCBP1	100	95.250	ENSORLG00015012127	NCBP1	100	95.250	Oryzias_latipes_hsok
ENSCVAG00000008795	NCBP1	100	95.500	ENSOMEG00000020698	NCBP1	100	95.500	Oryzias_melastigma
ENSCVAG00000008795	NCBP1	99	81.430	ENSOGAG00000013888	NCBP1	99	80.803	Otolemur_garnettii
ENSCVAG00000008795	NCBP1	99	81.509	ENSOARG00000011233	NCBP1	99	80.881	Ovis_aries
ENSCVAG00000008795	NCBP1	99	81.509	ENSPPAG00000026462	NCBP1	99	80.881	Pan_paniscus
ENSCVAG00000008795	NCBP1	99	81.761	ENSPPRG00000022574	NCBP1	99	81.132	Panthera_pardus
ENSCVAG00000008795	NCBP1	99	81.761	ENSPTIG00000018507	NCBP1	99	81.132	Panthera_tigris_altaica
ENSCVAG00000008795	NCBP1	99	81.509	ENSPTRG00000021167	NCBP1	99	80.881	Pan_troglodytes
ENSCVAG00000008795	NCBP1	99	81.509	ENSPANG00000025591	NCBP1	99	80.881	Papio_anubis
ENSCVAG00000008795	NCBP1	99	87.296	ENSPKIG00000015861	NCBP1	99	87.296	Paramormyrops_kingsleyae
ENSCVAG00000008795	NCBP1	64	81.250	ENSPSIG00000009558	NCBP1	99	80.078	Pelodiscus_sinensis
ENSCVAG00000008795	NCBP1	100	89.711	ENSPMGG00000020476	NCBP1	100	89.711	Periophthalmus_magnuspinnatus
ENSCVAG00000008795	NCBP1	99	80.629	ENSPEMG00000020105	Ncbp1	99	80.000	Peromyscus_maniculatus_bairdii
ENSCVAG00000008795	NCBP1	99	68.040	ENSPMAG00000005533	NCBP1	99	67.291	Petromyzon_marinus
ENSCVAG00000008795	NCBP1	99	81.006	ENSPCIG00000015800	NCBP1	99	83.260	Phascolarctos_cinereus
ENSCVAG00000008795	NCBP1	100	96.621	ENSPFOG00000004158	NCBP1	100	96.621	Poecilia_formosa
ENSCVAG00000008795	NCBP1	100	97.362	ENSPLAG00000020002	NCBP1	100	97.362	Poecilia_latipinna
ENSCVAG00000008795	NCBP1	100	96.985	ENSPMEG00000019821	NCBP1	100	96.985	Poecilia_mexicana
ENSCVAG00000008795	NCBP1	100	96.863	ENSPREG00000006035	NCBP1	100	96.863	Poecilia_reticulata
ENSCVAG00000008795	NCBP1	99	81.509	ENSPPYG00000019426	NCBP1	99	80.881	Pongo_abelii
ENSCVAG00000008795	NCBP1	90	79.456	ENSPCAG00000009943	NCBP1	90	79.456	Procavia_capensis
ENSCVAG00000008795	NCBP1	82	86.842	ENSPCOG00000020024	NCBP1	98	86.842	Propithecus_coquereli
ENSCVAG00000008795	NCBP1	99	81.384	ENSPVAG00000005924	NCBP1	99	80.755	Pteropus_vampyrus
ENSCVAG00000008795	NCBP1	91	93.065	ENSPNYG00000002140	NCBP1	99	93.065	Pundamilia_nyererei
ENSCVAG00000008795	NCBP1	100	89.474	ENSPNAG00000027753	NCBP1	100	89.474	Pygocentrus_nattereri
ENSCVAG00000008795	NCBP1	99	81.384	ENSRNOG00000023605	Ncbp1	99	80.755	Rattus_norvegicus
ENSCVAG00000008795	NCBP1	99	81.509	ENSRBIG00000043175	NCBP1	99	80.881	Rhinopithecus_bieti
ENSCVAG00000008795	NCBP1	99	81.509	ENSRROG00000029767	NCBP1	99	80.881	Rhinopithecus_roxellana
ENSCVAG00000008795	NCBP1	99	81.509	ENSSBOG00000019378	NCBP1	96	87.531	Saimiri_boliviensis_boliviensis
ENSCVAG00000008795	NCBP1	70	78.327	ENSSHAG00000015882	NCBP1	73	76.426	Sarcophilus_harrisii
ENSCVAG00000008795	NCBP1	98	85.587	ENSSFOG00015001872	NCBP1	99	83.648	Scleropages_formosus
ENSCVAG00000008795	NCBP1	100	92.965	ENSSMAG00000007463	NCBP1	100	92.965	Scophthalmus_maximus
ENSCVAG00000008795	NCBP1	100	93.719	ENSSDUG00000007019	NCBP1	100	94.384	Seriola_dumerili
ENSCVAG00000008795	NCBP1	100	94.724	ENSSLDG00000021924	NCBP1	100	94.724	Seriola_lalandi_dorsalis
ENSCVAG00000008795	NCBP1	85	70.194	ENSSARG00000007274	NCBP1	86	69.114	Sorex_araneus
ENSCVAG00000008795	NCBP1	99	76.478	ENSSPUG00000008609	NCBP1	99	76.101	Sphenodon_punctatus
ENSCVAG00000008795	NCBP1	100	95.980	ENSSPAG00000012550	NCBP1	100	95.980	Stegastes_partitus
ENSCVAG00000008795	NCBP1	99	81.509	ENSSSCG00000005366	NCBP1	99	80.881	Sus_scrofa
ENSCVAG00000008795	NCBP1	99	78.239	ENSTGUG00000001472	NCBP1	99	77.736	Taeniopygia_guttata
ENSCVAG00000008795	NCBP1	100	92.211	ENSTRUG00000005287	NCBP1	100	92.211	Takifugu_rubripes
ENSCVAG00000008795	NCBP1	99	79.119	ENSTBEG00000004035	NCBP1	99	78.491	Tupaia_belangeri
ENSCVAG00000008795	NCBP1	88	84.236	ENSTTRG00000000507	NCBP1	88	84.236	Tursiops_truncatus
ENSCVAG00000008795	NCBP1	99	81.635	ENSUAMG00000005471	NCBP1	99	81.006	Ursus_americanus
ENSCVAG00000008795	NCBP1	97	79.457	ENSUMAG00000011865	NCBP1	99	80.233	Ursus_maritimus
ENSCVAG00000008795	NCBP1	99	78.113	ENSVPAG00000010537	NCBP1	99	77.484	Vicugna_pacos
ENSCVAG00000008795	NCBP1	99	81.761	ENSVVUG00000019725	NCBP1	99	81.132	Vulpes_vulpes
ENSCVAG00000008795	NCBP1	99	79.146	ENSXETG00000010179	ncbp1	99	78.392	Xenopus_tropicalis
ENSCVAG00000008795	NCBP1	100	96.859	ENSXMAG00000018253	NCBP1	100	96.859	Xiphophorus_maculatus