EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000008877 (Gene tree)
Gene ID: 107088829
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 16017 bases
Position: chrKL652729.1:368966-384982
Accession: 107088829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007226	MBD	PF01429.19	1.2e-11	1	1
ENSCVAP00000024657	MBD	PF01429.19	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003641	-	4020	XM_015381253	ENSCVAP00000024657	1250 (aa)	XP_015236739	UPI000742CD79
ENSCVAT00000003657	-	3906	-	ENSCVAP00000007226	1212 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000008877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008877	setdb1b	99	68.586	ENSG00000143379	SETDB1	90	68.586	Homo_sapiens
ENSCVAG00000008877	setdb1b	100	81.688	ENSAPOG00000016228	setdb1b	100	81.579	Acanthochromis_polyacanthus
ENSCVAG00000008877	setdb1b	99	69.634	ENSAMEG00000001160	SETDB1	90	69.634	Ailuropoda_melanoleuca
ENSCVAG00000008877	setdb1b	99	80.199	ENSACIG00000007359	setdb1b	99	80.033	Amphilophus_citrinellus
ENSCVAG00000008877	setdb1b	99	77.465	ENSAOCG00000005586	setdb1b	100	77.382	Amphiprion_ocellaris
ENSCVAG00000008877	setdb1b	99	77.462	ENSAPEG00000007774	setdb1b	99	78.381	Amphiprion_percula
ENSCVAG00000008877	setdb1b	100	80.556	ENSATEG00000023520	setdb1b	100	81.032	Anabas_testudineus
ENSCVAG00000008877	setdb1b	99	69.189	ENSAPLG00000013908	SETDB1	90	68.984	Anas_platyrhynchos
ENSCVAG00000008877	setdb1b	99	68.586	ENSANAG00000001819	SETDB1	90	68.586	Aotus_nancymaae
ENSCVAG00000008877	setdb1b	100	79.442	ENSACLG00000020489	setdb1b	100	79.681	Astatotilapia_calliptera
ENSCVAG00000008877	setdb1b	93	71.573	ENSAMXG00000016168	setdb1b	99	73.181	Astyanax_mexicanus
ENSCVAG00000008877	setdb1b	99	70.652	ENSBTAG00000000098	SETDB1	89	70.652	Bos_taurus
ENSCVAG00000008877	setdb1b	99	68.586	ENSCJAG00000006972	SETDB1	90	68.586	Callithrix_jacchus
ENSCVAG00000008877	setdb1b	99	69.634	ENSCAFG00000023501	SETDB1	90	69.634	Canis_familiaris
ENSCVAG00000008877	setdb1b	99	69.634	ENSCAFG00020013596	SETDB1	94	74.590	Canis_lupus_dingo
ENSCVAG00000008877	setdb1b	99	69.110	ENSCHIG00000010698	SETDB1	90	69.110	Capra_hircus
ENSCVAG00000008877	setdb1b	84	56.468	ENSTSYG00000012646	SETDB1	95	56.718	Carlito_syrichta
ENSCVAG00000008877	setdb1b	75	64.338	ENSCAPG00000013619	SETDB1	83	77.990	Cavia_aperea
ENSCVAG00000008877	setdb1b	99	69.634	ENSCPOG00000001632	SETDB1	90	69.634	Cavia_porcellus
ENSCVAG00000008877	setdb1b	99	68.586	ENSCCAG00000024882	SETDB1	90	68.586	Cebus_capucinus
ENSCVAG00000008877	setdb1b	99	68.586	ENSCATG00000044888	SETDB1	85	68.063	Cercocebus_atys
ENSCVAG00000008877	setdb1b	99	69.110	ENSCLAG00000000242	SETDB1	90	69.110	Chinchilla_lanigera
ENSCVAG00000008877	setdb1b	88	68.063	ENSCSAG00000018034	SETDB1	86	68.063	Chlorocebus_sabaeus
ENSCVAG00000008877	setdb1b	95	74.675	ENSCHOG00000004013	SETDB1	85	74.026	Choloepus_hoffmanni
ENSCVAG00000008877	setdb1b	98	68.306	ENSCPBG00000008716	SETDB1	90	68.108	Chrysemys_picta_bellii
ENSCVAG00000008877	setdb1b	86	68.063	ENSCANG00000036388	SETDB1	79	77.128	Colobus_angolensis_palliatus
ENSCVAG00000008877	setdb1b	99	68.586	ENSCGRG00001010822	Setdb1	92	68.586	Cricetulus_griseus_chok1gshd
ENSCVAG00000008877	setdb1b	99	68.586	ENSCGRG00000005953	Setdb1	92	68.586	Cricetulus_griseus_crigri
ENSCVAG00000008877	setdb1b	99	75.770	ENSCSEG00000002988	setdb1b	100	74.835	Cynoglossus_semilaevis
ENSCVAG00000008877	setdb1b	98	69.779	ENSDARG00000099021	setdb1b	99	69.095	Danio_rerio
ENSCVAG00000008877	setdb1b	65	76.106	ENSDARG00000041243	setdb1a	60	76.106	Danio_rerio
ENSCVAG00000008877	setdb1b	99	69.110	ENSDNOG00000007754	SETDB1	90	69.110	Dasypus_novemcinctus
ENSCVAG00000008877	setdb1b	99	71.196	ENSDORG00000006830	Setdb1	89	71.196	Dipodomys_ordii
ENSCVAG00000008877	setdb1b	68	47.919	ENSEBUG00000005735	setdb1b	95	46.088	Eptatretus_burgeri
ENSCVAG00000008877	setdb1b	99	69.110	ENSEASG00005002061	SETDB1	90	69.110	Equus_asinus_asinus
ENSCVAG00000008877	setdb1b	99	69.110	ENSECAG00000023954	SETDB1	90	69.110	Equus_caballus
ENSCVAG00000008877	setdb1b	78	69.634	ENSEEUG00000015825	SETDB1	70	69.110	Erinaceus_europaeus
ENSCVAG00000008877	setdb1b	99	69.490	ENSELUG00000013948	setdb1b	93	84.551	Esox_lucius
ENSCVAG00000008877	setdb1b	81	70.213	ENSELUG00000006204	-	70	70.213	Esox_lucius
ENSCVAG00000008877	setdb1b	99	69.634	ENSFCAG00000009655	SETDB1	90	69.634	Felis_catus
ENSCVAG00000008877	setdb1b	98	69.110	ENSFDAG00000021515	SETDB1	88	69.110	Fukomys_damarensis
ENSCVAG00000008877	setdb1b	100	90.435	ENSFHEG00000022195	setdb1b	100	89.802	Fundulus_heteroclitus
ENSCVAG00000008877	setdb1b	99	67.358	ENSGMOG00000005993	setdb1b	100	66.560	Gadus_morhua
ENSCVAG00000008877	setdb1b	99	68.557	ENSGALG00000024051	SETDB1	83	67.526	Gallus_gallus
ENSCVAG00000008877	setdb1b	97	89.251	ENSGAFG00000012805	setdb1b	100	88.925	Gambusia_affinis
ENSCVAG00000008877	setdb1b	99	67.994	ENSGACG00000011675	setdb1b	95	76.884	Gasterosteus_aculeatus
ENSCVAG00000008877	setdb1b	98	69.189	ENSGAGG00000005348	SETDB1	90	68.649	Gopherus_agassizii
ENSCVAG00000008877	setdb1b	99	68.586	ENSGGOG00000016308	SETDB1	90	68.586	Gorilla_gorilla
ENSCVAG00000008877	setdb1b	100	79.442	ENSHBUG00000004618	setdb1b	100	79.681	Haplochromis_burtoni
ENSCVAG00000008877	setdb1b	99	69.110	ENSHGLG00000011098	SETDB1	90	69.110	Heterocephalus_glaber_female
ENSCVAG00000008877	setdb1b	98	69.110	ENSHGLG00100009789	SETDB1	94	69.110	Heterocephalus_glaber_male
ENSCVAG00000008877	setdb1b	100	73.445	ENSHCOG00000014567	setdb1b	100	72.973	Hippocampus_comes
ENSCVAG00000008877	setdb1b	98	66.559	ENSIPUG00000004536	setdb1	96	70.110	Ictalurus_punctatus
ENSCVAG00000008877	setdb1b	99	69.634	ENSSTOG00000006770	SETDB1	90	69.634	Ictidomys_tridecemlineatus
ENSCVAG00000008877	setdb1b	99	81.034	ENSKMAG00000001197	setdb1b	100	80.956	Kryptolebias_marmoratus
ENSCVAG00000008877	setdb1b	99	75.527	ENSLBEG00000025862	setdb1b	96	83.379	Labrus_bergylta
ENSCVAG00000008877	setdb1b	99	62.679	ENSLACG00000011159	SETDB1	91	61.722	Latimeria_chalumnae
ENSCVAG00000008877	setdb1b	99	68.557	ENSLAFG00000004006	SETDB1	90	68.041	Loxodonta_africana
ENSCVAG00000008877	setdb1b	99	68.586	ENSMFAG00000042328	SETDB1	90	68.586	Macaca_fascicularis
ENSCVAG00000008877	setdb1b	99	68.586	ENSMMUG00000023235	SETDB1	90	68.586	Macaca_mulatta
ENSCVAG00000008877	setdb1b	99	68.586	ENSMNEG00000017223	SETDB1	90	68.586	Macaca_nemestrina
ENSCVAG00000008877	setdb1b	99	68.586	ENSMLEG00000033050	SETDB1	90	68.586	Mandrillus_leucophaeus
ENSCVAG00000008877	setdb1b	99	80.892	ENSMAMG00000015176	setdb1b	87	80.892	Mastacembelus_armatus
ENSCVAG00000008877	setdb1b	100	79.442	ENSMZEG00005016099	setdb1b	100	79.681	Maylandia_zebra
ENSCVAG00000008877	setdb1b	87	54.701	ENSMGAG00000001018	SETDB1	88	53.704	Meleagris_gallopavo
ENSCVAG00000008877	setdb1b	85	70.157	ENSMAUG00000021391	Setdb1	91	70.157	Mesocricetus_auratus
ENSCVAG00000008877	setdb1b	99	69.110	ENSMICG00000000425	SETDB1	90	69.110	Microcebus_murinus
ENSCVAG00000008877	setdb1b	98	69.634	ENSMOCG00000017407	Setdb1	92	69.634	Microtus_ochrogaster
ENSCVAG00000008877	setdb1b	99	79.436	ENSMMOG00000016162	setdb1b	99	78.607	Mola_mola
ENSCVAG00000008877	setdb1b	99	67.582	ENSMODG00000018821	SETDB1	81	67.033	Monodelphis_domestica
ENSCVAG00000008877	setdb1b	99	75.891	ENSMALG00000007801	setdb1b	98	78.848	Monopterus_albus
ENSCVAG00000008877	setdb1b	99	69.110	MGP_CAROLIEiJ_G0025342	Setdb1	90	69.110	Mus_caroli
ENSCVAG00000008877	setdb1b	99	70.053	ENSMUSG00000015697	Setdb1	90	70.053	Mus_musculus
ENSCVAG00000008877	setdb1b	99	69.634	ENSMPUG00000004298	SETDB1	90	69.110	Mustela_putorius_furo
ENSCVAG00000008877	setdb1b	98	69.110	ENSMLUG00000010486	SETDB1	90	68.586	Myotis_lucifugus
ENSCVAG00000008877	setdb1b	99	69.110	ENSNGAG00000020151	Setdb1	89	69.110	Nannospalax_galili
ENSCVAG00000008877	setdb1b	99	78.128	ENSNBRG00000003147	setdb1b	99	81.187	Neolamprologus_brichardi
ENSCVAG00000008877	setdb1b	99	63.725	ENSNLEG00000009996	SETDB1	90	63.235	Nomascus_leucogenys
ENSCVAG00000008877	setdb1b	87	69.519	ENSMEUG00000006544	-	76	68.984	Notamacropus_eugenii
ENSCVAG00000008877	setdb1b	96	61.333	ENSOPRG00000015349	SETDB1	89	61.184	Ochotona_princeps
ENSCVAG00000008877	setdb1b	99	69.110	ENSODEG00000012471	SETDB1	90	69.110	Octodon_degus
ENSCVAG00000008877	setdb1b	100	78.901	ENSONIG00000006454	setdb1b	100	78.566	Oreochromis_niloticus
ENSCVAG00000008877	setdb1b	98	68.783	ENSOCUG00000003642	SETDB1	90	69.110	Oryctolagus_cuniculus
ENSCVAG00000008877	setdb1b	100	80.732	ENSORLG00000010602	setdb1b	100	80.110	Oryzias_latipes
ENSCVAG00000008877	setdb1b	67	89.488	ENSORLG00020008638	setdb1b	99	79.757	Oryzias_latipes_hni
ENSCVAG00000008877	setdb1b	100	79.778	ENSORLG00015014543	setdb1b	100	80.301	Oryzias_latipes_hsok
ENSCVAG00000008877	setdb1b	100	81.355	ENSOMEG00000009457	setdb1b	99	84.334	Oryzias_melastigma
ENSCVAG00000008877	setdb1b	99	69.110	ENSOGAG00000010320	SETDB1	90	69.110	Otolemur_garnettii
ENSCVAG00000008877	setdb1b	99	69.110	ENSOARG00000020880	SETDB1	90	69.110	Ovis_aries
ENSCVAG00000008877	setdb1b	99	68.586	ENSPPAG00000041015	SETDB1	90	68.586	Pan_paniscus
ENSCVAG00000008877	setdb1b	99	69.110	ENSPPRG00000005462	SETDB1	90	69.110	Panthera_pardus
ENSCVAG00000008877	setdb1b	99	69.110	ENSPTIG00000014233	SETDB1	90	69.110	Panthera_tigris_altaica
ENSCVAG00000008877	setdb1b	99	68.586	ENSPTRG00000001267	SETDB1	90	68.586	Pan_troglodytes
ENSCVAG00000008877	setdb1b	99	68.586	ENSPANG00000020214	SETDB1	90	68.586	Papio_anubis
ENSCVAG00000008877	setdb1b	99	66.039	ENSPKIG00000010963	setdb1b	99	66.171	Paramormyrops_kingsleyae
ENSCVAG00000008877	setdb1b	53	57.902	ENSPSIG00000008407	SETDB1	69	67.045	Pelodiscus_sinensis
ENSCVAG00000008877	setdb1b	94	68.557	ENSPEMG00000010553	Setdb1	91	68.557	Peromyscus_maniculatus_bairdii
ENSCVAG00000008877	setdb1b	98	65.385	ENSPMAG00000001573	setdb1b	69	64.130	Petromyzon_marinus
ENSCVAG00000008877	setdb1b	99	87.428	ENSPFOG00000004429	setdb1b	99	87.099	Poecilia_formosa
ENSCVAG00000008877	setdb1b	99	79.845	ENSPFOG00000004623	-	94	77.885	Poecilia_formosa
ENSCVAG00000008877	setdb1b	99	90.104	ENSPLAG00000019076	-	100	90.024	Poecilia_latipinna
ENSCVAG00000008877	setdb1b	97	89.762	ENSPLAG00000017117	setdb1b	100	89.681	Poecilia_latipinna
ENSCVAG00000008877	setdb1b	100	89.778	ENSPMEG00000006468	setdb1b	100	89.540	Poecilia_mexicana
ENSCVAG00000008877	setdb1b	100	89.644	ENSPREG00000017459	setdb1b	100	89.407	Poecilia_reticulata
ENSCVAG00000008877	setdb1b	99	68.586	ENSPPYG00000000887	SETDB1	90	68.586	Pongo_abelii
ENSCVAG00000008877	setdb1b	84	55.904	ENSPCAG00000002527	SETDB1	90	55.433	Procavia_capensis
ENSCVAG00000008877	setdb1b	99	69.110	ENSPCOG00000027869	SETDB1	90	69.110	Propithecus_coquereli
ENSCVAG00000008877	setdb1b	97	58.247	ENSPVAG00000004355	SETDB1	86	57.732	Pteropus_vampyrus
ENSCVAG00000008877	setdb1b	99	76.398	ENSPNYG00000003997	setdb1b	98	80.846	Pundamilia_nyererei
ENSCVAG00000008877	setdb1b	98	68.062	ENSPNAG00000021617	setdb1b	55	75.111	Pygocentrus_nattereri
ENSCVAG00000008877	setdb1b	99	69.110	ENSRNOG00000021143	Setdb1	97	54.755	Rattus_norvegicus
ENSCVAG00000008877	setdb1b	99	68.586	ENSRBIG00000042359	SETDB1	90	68.063	Rhinopithecus_bieti
ENSCVAG00000008877	setdb1b	99	68.586	ENSRROG00000032628	SETDB1	90	68.586	Rhinopithecus_roxellana
ENSCVAG00000008877	setdb1b	98	68.586	ENSSBOG00000028608	SETDB1	88	68.586	Saimiri_boliviensis_boliviensis
ENSCVAG00000008877	setdb1b	98	68.984	ENSSHAG00000012701	SETDB1	90	68.449	Sarcophilus_harrisii
ENSCVAG00000008877	setdb1b	99	65.861	ENSSFOG00015022183	setdb1	99	65.099	Scleropages_formosus
ENSCVAG00000008877	setdb1b	100	82.695	ENSSDUG00000007513	setdb1b	100	82.695	Seriola_dumerili
ENSCVAG00000008877	setdb1b	100	82.339	ENSSLDG00000015209	setdb1b	100	82.418	Seriola_lalandi_dorsalis
ENSCVAG00000008877	setdb1b	100	57.676	ENSSPUG00000002969	SETDB1	95	57.676	Sphenodon_punctatus
ENSCVAG00000008877	setdb1b	98	69.110	ENSSSCG00000006645	SETDB1	90	69.110	Sus_scrofa
ENSCVAG00000008877	setdb1b	94	67.568	ENSTGUG00000004684	SETDB1	90	69.189	Taeniopygia_guttata
ENSCVAG00000008877	setdb1b	99	74.690	ENSTRUG00000014641	setdb1b	99	74.321	Takifugu_rubripes
ENSCVAG00000008877	setdb1b	99	67.347	ENSTNIG00000008065	setdb1b	99	68.027	Tetraodon_nigroviridis
ENSCVAG00000008877	setdb1b	93	69.110	ENSTBEG00000009306	SETDB1	90	69.110	Tupaia_belangeri
ENSCVAG00000008877	setdb1b	85	69.110	ENSTTRG00000006966	SETDB1	76	69.110	Tursiops_truncatus
ENSCVAG00000008877	setdb1b	99	69.072	ENSUAMG00000026724	SETDB1	90	69.072	Ursus_americanus
ENSCVAG00000008877	setdb1b	99	69.072	ENSUMAG00000003141	SETDB1	90	69.072	Ursus_maritimus
ENSCVAG00000008877	setdb1b	79	58.754	ENSVPAG00000005440	SETDB1	75	58.637	Vicugna_pacos
ENSCVAG00000008877	setdb1b	99	69.634	ENSVVUG00000011637	SETDB1	90	69.634	Vulpes_vulpes
ENSCVAG00000008877	setdb1b	99	72.432	ENSXETG00000008936	setdb1	89	72.432	Xenopus_tropicalis
ENSCVAG00000008877	setdb1b	99	81.138	ENSXCOG00000019497	setdb1b	91	83.663	Xiphophorus_couchianus
ENSCVAG00000008877	setdb1b	100	90.238	ENSXMAG00000016600	setdb1b	100	89.603	Xiphophorus_maculatus