EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000008910 (Gene tree)
Gene ID: 107092564
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 49789 bases
Position: chrKL652517.1:2503169-2552957
Accession: 107092564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024671	La	PF05383.17	1.3e-13	1	1
ENSCVAP00000007280	La	PF05383.17	1.4e-13	1	1
ENSCVAP00000007257	La	PF05383.17	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003607	LARP4B-203	7220	-	ENSCVAP00000007257	791 (aa)	-	-
ENSCVAT00000003576	LARP4B-201	7510	XM_015387110	ENSCVAP00000007280	764 (aa)	XP_015242596	UPI000742B58B
ENSCVAT00000003593	LARP4B-202	7336	-	ENSCVAP00000024671	706 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000008910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000008910	LARP4B	82	37.883	ENSCVAG00000005488	larp4aa	74	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008910	LARP4B	100	56.320	ENSG00000107929	LARP4B	100	55.250	Homo_sapiens
ENSCVAG00000008910	LARP4B	100	75.171	ENSAPOG00000020531	LARP4B	90	89.474	Acanthochromis_polyacanthus
ENSCVAG00000008910	LARP4B	92	56.005	ENSAMEG00000001810	LARP4B	100	53.875	Ailuropoda_melanoleuca
ENSCVAG00000008910	LARP4B	98	71.332	ENSAOCG00000007887	-	95	89.850	Amphiprion_ocellaris
ENSCVAG00000008910	LARP4B	92	83.898	ENSAPEG00000002512	LARP4B	96	81.511	Amphiprion_percula
ENSCVAG00000008910	LARP4B	100	81.959	ENSATEG00000012614	LARP4B	100	81.900	Anabas_testudineus
ENSCVAG00000008910	LARP4B	100	58.698	ENSAPLG00000003813	LARP4B	98	58.198	Anas_platyrhynchos
ENSCVAG00000008910	LARP4B	100	59.435	ENSACAG00000002858	LARP4B	100	58.824	Anolis_carolinensis
ENSCVAG00000008910	LARP4B	100	56.195	ENSANAG00000007531	-	100	55.319	Aotus_nancymaae
ENSCVAG00000008910	LARP4B	100	84.123	ENSACLG00000026356	LARP4B	97	88.077	Astatotilapia_calliptera
ENSCVAG00000008910	LARP4B	94	52.151	ENSAMXG00000003335	larp4b	96	51.812	Astyanax_mexicanus
ENSCVAG00000008910	LARP4B	97	56.919	ENSBTAG00000013899	LARP4B	97	56.166	Bos_taurus
ENSCVAG00000008910	LARP4B	100	56.070	ENSCJAG00000018434	LARP4B	100	55.194	Callithrix_jacchus
ENSCVAG00000008910	LARP4B	91	57.084	ENSCAFG00020004209	LARP4B	100	54.500	Canis_lupus_dingo
ENSCVAG00000008910	LARP4B	97	55.118	ENSCHIG00000013543	LARP4B	98	54.178	Capra_hircus
ENSCVAG00000008910	LARP4B	89	60.876	ENSTSYG00000002568	LARP4B	100	60.000	Carlito_syrichta
ENSCVAG00000008910	LARP4B	89	55.243	ENSCAPG00000009725	LARP4B	89	51.763	Cavia_aperea
ENSCVAG00000008910	LARP4B	100	55.458	ENSCPOG00000009375	LARP4B	100	54.637	Cavia_porcellus
ENSCVAG00000008910	LARP4B	100	56.195	ENSCCAG00000024869	LARP4B	100	55.194	Cebus_capucinus
ENSCVAG00000008910	LARP4B	100	56.571	ENSCATG00000019750	LARP4B	100	55.945	Cercocebus_atys
ENSCVAG00000008910	LARP4B	100	56.098	ENSCLAG00000011570	LARP4B	100	55.256	Chinchilla_lanigera
ENSCVAG00000008910	LARP4B	69	78.788	ENSCHOG00000007831	-	59	78.788	Choloepus_hoffmanni
ENSCVAG00000008910	LARP4B	100	60.026	ENSCPBG00000017063	LARP4B	100	59.231	Chrysemys_picta_bellii
ENSCVAG00000008910	LARP4B	100	54.693	ENSCANG00000038021	LARP4B	100	54.068	Colobus_angolensis_palliatus
ENSCVAG00000008910	LARP4B	100	54.917	ENSCGRG00001022930	Larp4b	100	54.278	Cricetulus_griseus_chok1gshd
ENSCVAG00000008910	LARP4B	100	54.917	ENSCGRG00000006022	Larp4b	100	54.278	Cricetulus_griseus_crigri
ENSCVAG00000008910	LARP4B	100	72.943	ENSCSEG00000007342	LARP4B	100	81.928	Cynoglossus_semilaevis
ENSCVAG00000008910	LARP4B	92	52.885	ENSDARG00000062146	larp4b	95	53.022	Danio_rerio
ENSCVAG00000008910	LARP4B	96	55.541	ENSDNOG00000045543	-	100	62.548	Dasypus_novemcinctus
ENSCVAG00000008910	LARP4B	100	53.199	ENSDORG00000009328	Larp4b	100	52.632	Dipodomys_ordii
ENSCVAG00000008910	LARP4B	88	57.910	ENSETEG00000011249	LARP4B	90	57.955	Echinops_telfairi
ENSCVAG00000008910	LARP4B	91	56.753	ENSEASG00005019068	-	100	54.375	Equus_asinus_asinus
ENSCVAG00000008910	LARP4B	91	57.026	ENSECAG00000024040	LARP4B	100	54.625	Equus_caballus
ENSCVAG00000008910	LARP4B	92	55.827	ENSEEUG00000008391	LARP4B	98	53.665	Erinaceus_europaeus
ENSCVAG00000008910	LARP4B	87	42.835	ENSELUG00000001417	-	77	47.937	Esox_lucius
ENSCVAG00000008910	LARP4B	100	71.283	ENSELUG00000008626	LARP4B	100	70.865	Esox_lucius
ENSCVAG00000008910	LARP4B	91	56.676	ENSFCAG00000000721	-	100	55.500	Felis_catus
ENSCVAG00000008910	LARP4B	100	59.846	ENSFALG00000006961	LARP4B	100	59.588	Ficedula_albicollis
ENSCVAG00000008910	LARP4B	100	56.320	ENSFDAG00000006158	LARP4B	97	55.332	Fukomys_damarensis
ENSCVAG00000008910	LARP4B	100	71.671	ENSFHEG00000013037	LARP4B	100	71.802	Fundulus_heteroclitus
ENSCVAG00000008910	LARP4B	68	77.953	ENSGMOG00000010818	-	81	77.953	Gadus_morhua
ENSCVAG00000008910	LARP4B	100	59.411	ENSGALG00000006672	LARP4B	100	58.899	Gallus_gallus
ENSCVAG00000008910	LARP4B	100	73.120	ENSGACG00000017535	LARP4B	98	72.750	Gasterosteus_aculeatus
ENSCVAG00000008910	LARP4B	94	58.345	ENSGAGG00000008598	LARP4B	100	57.375	Gopherus_agassizii
ENSCVAG00000008910	LARP4B	100	56.195	ENSGGOG00000003572	LARP4B	100	55.125	Gorilla_gorilla
ENSCVAG00000008910	LARP4B	100	85.091	ENSHBUG00000007535	LARP4B	100	85.232	Haplochromis_burtoni
ENSCVAG00000008910	LARP4B	100	55.820	ENSHGLG00000012936	LARP4B	100	61.301	Heterocephalus_glaber_female
ENSCVAG00000008910	LARP4B	85	50.998	ENSHGLG00100017261	-	100	50.000	Heterocephalus_glaber_male
ENSCVAG00000008910	LARP4B	100	55.834	ENSHGLG00100016220	-	100	55.569	Heterocephalus_glaber_male
ENSCVAG00000008910	LARP4B	99	69.391	ENSHCOG00000011581	LARP4B	89	69.391	Hippocampus_comes
ENSCVAG00000008910	LARP4B	93	51.867	ENSIPUG00000009705	larp4b	98	51.733	Ictalurus_punctatus
ENSCVAG00000008910	LARP4B	90	63.051	ENSSTOG00000000587	LARP4B	95	62.712	Ictidomys_tridecemlineatus
ENSCVAG00000008910	LARP4B	100	56.266	ENSJJAG00000020847	Larp4b	100	55.375	Jaculus_jaculus
ENSCVAG00000008910	LARP4B	100	86.198	ENSKMAG00000021674	LARP4B	100	86.761	Kryptolebias_marmoratus
ENSCVAG00000008910	LARP4B	76	88.215	ENSLBEG00000025293	-	82	88.215	Labrus_bergylta
ENSCVAG00000008910	LARP4B	94	57.613	ENSLACG00000009492	LARP4B	98	58.567	Latimeria_chalumnae
ENSCVAG00000008910	LARP4B	100	63.205	ENSLOCG00000012290	larp4b	100	63.474	Lepisosteus_oculatus
ENSCVAG00000008910	LARP4B	100	55.185	ENSLAFG00000015334	LARP4B	100	54.568	Loxodonta_africana
ENSCVAG00000008910	LARP4B	100	56.571	ENSMFAG00000001766	LARP4B	100	54.068	Macaca_fascicularis
ENSCVAG00000008910	LARP4B	100	56.571	ENSMMUG00000005279	LARP4B	100	55.945	Macaca_mulatta
ENSCVAG00000008910	LARP4B	100	56.446	ENSMNEG00000014019	LARP4B	100	53.942	Macaca_nemestrina
ENSCVAG00000008910	LARP4B	100	56.696	ENSMLEG00000035198	LARP4B	100	56.070	Mandrillus_leucophaeus
ENSCVAG00000008910	LARP4B	100	85.227	ENSMAMG00000013742	LARP4B	100	81.935	Mastacembelus_armatus
ENSCVAG00000008910	LARP4B	100	74.198	ENSMZEG00005006498	-	95	91.353	Maylandia_zebra
ENSCVAG00000008910	LARP4B	94	83.287	ENSMZEG00005014594	-	100	83.425	Maylandia_zebra
ENSCVAG00000008910	LARP4B	100	56.696	ENSMGAG00000005472	LARP4B	100	56.446	Meleagris_gallopavo
ENSCVAG00000008910	LARP4B	100	55.473	ENSMAUG00000021657	Larp4b	100	54.534	Mesocricetus_auratus
ENSCVAG00000008910	LARP4B	100	56.591	ENSMICG00000001301	LARP4B	100	55.826	Microcebus_murinus
ENSCVAG00000008910	LARP4B	75	60.130	ENSMOCG00000021452	Larp4b	89	59.806	Microtus_ochrogaster
ENSCVAG00000008910	LARP4B	86	96.552	ENSMMOG00000011253	-	96	74.173	Mola_mola
ENSCVAG00000008910	LARP4B	100	56.907	ENSMODG00000005957	LARP4B	100	56.692	Monodelphis_domestica
ENSCVAG00000008910	LARP4B	100	68.458	ENSMALG00000012432	LARP4B	100	68.600	Monopterus_albus
ENSCVAG00000008910	LARP4B	100	55.625	MGP_CAROLIEiJ_G0018216	Larp4b	100	55.263	Mus_caroli
ENSCVAG00000008910	LARP4B	100	56.305	ENSMUSG00000033499	Larp4b	100	60.258	Mus_musculus
ENSCVAG00000008910	LARP4B	100	56.180	MGP_PahariEiJ_G0019266	Larp4b	100	55.362	Mus_pahari
ENSCVAG00000008910	LARP4B	100	56.305	MGP_SPRETEiJ_G0019074	Larp4b	100	60.420	Mus_spretus
ENSCVAG00000008910	LARP4B	91	56.812	ENSMPUG00000016220	LARP4B	97	55.194	Mustela_putorius_furo
ENSCVAG00000008910	LARP4B	88	56.268	ENSMLUG00000005880	LARP4B	99	54.217	Myotis_lucifugus
ENSCVAG00000008910	LARP4B	100	55.625	ENSNGAG00000001750	Larp4b	100	55.000	Nannospalax_galili
ENSCVAG00000008910	LARP4B	100	67.922	ENSNBRG00000020018	LARP4B	100	67.643	Neolamprologus_brichardi
ENSCVAG00000008910	LARP4B	100	56.070	ENSNLEG00000013442	LARP4B	100	55.319	Nomascus_leucogenys
ENSCVAG00000008910	LARP4B	84	47.727	ENSMEUG00000013114	-	83	47.727	Notamacropus_eugenii
ENSCVAG00000008910	LARP4B	100	53.300	ENSOPRG00000003300	LARP4B	100	51.990	Ochotona_princeps
ENSCVAG00000008910	LARP4B	100	52.070	ENSODEG00000001109	LARP4B	100	51.314	Octodon_degus
ENSCVAG00000008910	LARP4B	100	83.376	ENSONIG00000017705	LARP4B	100	83.505	Oreochromis_niloticus
ENSCVAG00000008910	LARP4B	100	55.322	ENSOANG00000006100	LARP4B	100	54.703	Ornithorhynchus_anatinus
ENSCVAG00000008910	LARP4B	100	53.406	ENSOCUG00000004950	LARP4B	97	52.612	Oryctolagus_cuniculus
ENSCVAG00000008910	LARP4B	100	81.877	ENSORLG00000006080	LARP4B	100	80.909	Oryzias_latipes
ENSCVAG00000008910	LARP4B	100	82.394	ENSORLG00020020940	LARP4B	100	81.487	Oryzias_latipes_hni
ENSCVAG00000008910	LARP4B	100	82.203	ENSORLG00015020608	LARP4B	100	81.294	Oryzias_latipes_hsok
ENSCVAG00000008910	LARP4B	100	80.731	ENSOMEG00000019619	LARP4B	100	80.731	Oryzias_melastigma
ENSCVAG00000008910	LARP4B	96	55.313	ENSOGAG00000011540	LARP4B	99	55.405	Otolemur_garnettii
ENSCVAG00000008910	LARP4B	97	54.902	ENSOARG00000015320	LARP4B	96	53.966	Ovis_aries
ENSCVAG00000008910	LARP4B	100	56.446	ENSPPAG00000039232	LARP4B	100	55.820	Pan_paniscus
ENSCVAG00000008910	LARP4B	94	55.526	ENSPPRG00000009489	LARP4B	100	55.250	Panthera_pardus
ENSCVAG00000008910	LARP4B	94	55.436	ENSPTIG00000008543	LARP4B	100	55.250	Panthera_tigris_altaica
ENSCVAG00000008910	LARP4B	100	56.446	ENSPTRG00000002235	LARP4B	100	55.820	Pan_troglodytes
ENSCVAG00000008910	LARP4B	100	56.571	ENSPANG00000023546	LARP4B	100	54.068	Papio_anubis
ENSCVAG00000008910	LARP4B	99	59.533	ENSPKIG00000012368	LARP4B	98	59.663	Paramormyrops_kingsleyae
ENSCVAG00000008910	LARP4B	72	69.350	ENSPSIG00000005600	LARP4B	99	68.731	Pelodiscus_sinensis
ENSCVAG00000008910	LARP4B	71	73.260	ENSPMGG00000008261	LARP4B	76	73.077	Periophthalmus_magnuspinnatus
ENSCVAG00000008910	LARP4B	100	55.357	ENSPEMG00000014052	Larp4b	100	54.250	Peromyscus_maniculatus_bairdii
ENSCVAG00000008910	LARP4B	100	88.015	ENSPFOG00000000029	LARP4B	100	87.629	Poecilia_formosa
ENSCVAG00000008910	LARP4B	100	88.144	ENSPLAG00000002871	LARP4B	100	87.500	Poecilia_latipinna
ENSCVAG00000008910	LARP4B	100	88.317	ENSPMEG00000016361	LARP4B	100	87.900	Poecilia_mexicana
ENSCVAG00000008910	LARP4B	100	55.890	ENSPPYG00000002035	LARP4B	97	54.819	Pongo_abelii
ENSCVAG00000008910	LARP4B	100	55.025	ENSPCOG00000014688	LARP4B	100	54.648	Propithecus_coquereli
ENSCVAG00000008910	LARP4B	89	56.250	ENSPVAG00000009784	LARP4B	83	55.607	Pteropus_vampyrus
ENSCVAG00000008910	LARP4B	100	84.123	ENSPNYG00000024252	LARP4B	100	84.262	Pundamilia_nyererei
ENSCVAG00000008910	LARP4B	94	52.263	ENSPNAG00000028956	larp4b	97	52.186	Pygocentrus_nattereri
ENSCVAG00000008910	LARP4B	99	55.402	ENSRNOG00000015888	Larp4b	100	54.705	Rattus_norvegicus
ENSCVAG00000008910	LARP4B	100	56.446	ENSRBIG00000033294	LARP4B	100	55.820	Rhinopithecus_bieti
ENSCVAG00000008910	LARP4B	100	56.571	ENSRROG00000033879	LARP4B	100	55.945	Rhinopithecus_roxellana
ENSCVAG00000008910	LARP4B	100	51.564	ENSSBOG00000021109	LARP4B	100	50.688	Saimiri_boliviensis_boliviensis
ENSCVAG00000008910	LARP4B	100	58.462	ENSSHAG00000013392	LARP4B	100	57.834	Sarcophilus_harrisii
ENSCVAG00000008910	LARP4B	95	59.225	ENSSFOG00015003256	LARP4B	93	59.518	Scleropages_formosus
ENSCVAG00000008910	LARP4B	83	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSCVAG00000008910	LARP4B	100	87.237	ENSSDUG00000006704	LARP4B	100	86.957	Seriola_dumerili
ENSCVAG00000008910	LARP4B	100	75.209	ENSSLDG00000020660	LARP4B	97	82.857	Seriola_lalandi_dorsalis
ENSCVAG00000008910	LARP4B	71	84.112	ENSSARG00000001243	-	79	84.112	Sorex_araneus
ENSCVAG00000008910	LARP4B	100	59.501	ENSSPUG00000013734	-	100	64.912	Sphenodon_punctatus
ENSCVAG00000008910	LARP4B	100	62.448	ENSSPUG00000002102	-	100	61.997	Sphenodon_punctatus
ENSCVAG00000008910	LARP4B	91	82.583	ENSSPAG00000014628	LARP4B	92	93.103	Stegastes_partitus
ENSCVAG00000008910	LARP4B	100	55.625	ENSSSCG00000011162	LARP4B	97	60.920	Sus_scrofa
ENSCVAG00000008910	LARP4B	100	59.108	ENSTGUG00000000811	-	100	58.599	Taeniopygia_guttata
ENSCVAG00000008910	LARP4B	100	69.388	ENSTNIG00000004571	-	98	69.202	Tetraodon_nigroviridis
ENSCVAG00000008910	LARP4B	99	67.643	ENSTNIG00000007991	LARP4B	100	72.238	Tetraodon_nigroviridis
ENSCVAG00000008910	LARP4B	83	60.728	ENSTTRG00000011151	LARP4B	84	61.277	Tursiops_truncatus
ENSCVAG00000008910	LARP4B	86	58.055	ENSUAMG00000016461	LARP4B	95	56.957	Ursus_americanus
ENSCVAG00000008910	LARP4B	91	56.948	ENSUMAG00000016127	LARP4B	100	54.375	Ursus_maritimus
ENSCVAG00000008910	LARP4B	91	56.812	ENSVVUG00000008641	LARP4B	100	54.250	Vulpes_vulpes
ENSCVAG00000008910	LARP4B	99	58.612	ENSXETG00000016882	larp4b	100	57.303	Xenopus_tropicalis
ENSCVAG00000008910	LARP4B	100	72.776	ENSXCOG00000019952	LARP4B	100	71.937	Xiphophorus_couchianus
ENSCVAG00000008910	LARP4B	100	87.849	ENSXMAG00000021533	LARP4B	100	86.732	Xiphophorus_maculatus