EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000009100 (Gene tree)
Gene ID
107097812
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
31916 bases
Position
chrKL653225.1:207005-238920
Accession
107097812
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000007348RRM_1PF00076.226.1e-3312
ENSCVAP00000007348RRM_1PF00076.226.1e-3322
ENSCVAP00000024723RRM_1PF00076.227.3e-3312
ENSCVAP00000024723RRM_1PF00076.227.3e-3322
ENSCVAP00000024725RRM_1PF00076.227.3e-3312
ENSCVAP00000024725RRM_1PF00076.227.3e-3322
ENSCVAP00000007344RRM_1PF00076.228.1e-3312
ENSCVAP00000007344RRM_1PF00076.228.1e-3322
ENSCVAP00000024734RRM_1PF00076.225.6e-2812
ENSCVAP00000024734RRM_1PF00076.225.6e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000003494MSI1-2051005-ENSCVAP00000024734334 (aa)--
ENSCVAT00000003470MSI1-2043093-ENSCVAP00000007344359 (aa)--
ENSCVAT00000003440MSI1-2013330XM_015395111ENSCVAP00000024725348 (aa)XP_015250597UPI000742CB54
ENSCVAT00000003458MSI1-2033191XM_015395114ENSCVAP00000007348329 (aa)XP_015250600UPI0007427B1A
ENSCVAT00000003451MSI1-2023248XM_015395112ENSCVAP00000024723348 (aa)XP_015250598UPI000742CB54
Gene Model
Click here to download ENSCVAG00000009100's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009100's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000009100MSI15640.642ENSCVAG00000018995hnrnpa36936.546
ENSCVAG00000009100MSI110070.303ENSCVAG00000017075msi2a10070.303
ENSCVAG00000009100MSI16043.719ENSCVAG00000019790hnrnpd7446.988
ENSCVAG00000009100MSI17043.038ENSCVAG00000018607dazap15740.230
ENSCVAG00000009100MSI15237.931ENSCVAG00000008324-8638.537
ENSCVAG00000009100MSI15545.556ENSCVAG00000002489-8338.258
ENSCVAG00000009100MSI15546.111ENSCVAG00000019772hnrnpaba8042.667
ENSCVAG00000009100MSI18568.664ENSCVAG00000017463-8975.115
ENSCVAG00000009100MSI15441.304ENSCVAG00000012637hnrnpa1a5640.957
ENSCVAG00000009100MSI15466.418ENSCVAG00000017430zgc:1107969466.418
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000009100MSI110084.254ENSG00000135097MSI19987.500Homo_sapiens
ENSCVAG00000009100MSI110092.857ENSAPOG00000003191MSI110092.857Acanthochromis_polyacanthus
ENSCVAG00000009100MSI110098.281ENSAPOG00000023458-10098.281Acanthochromis_polyacanthus
ENSCVAG00000009100MSI19468.508ENSAMEG00000013302MSI110068.785Ailuropoda_melanoleuca
ENSCVAG00000009100MSI19090.615ENSACIG00000017754-7890.615Amphilophus_citrinellus
ENSCVAG00000009100MSI19492.308ENSAOCG00000009031-9592.308Amphiprion_ocellaris
ENSCVAG00000009100MSI110092.857ENSAOCG00000003804MSI110092.857Amphiprion_ocellaris
ENSCVAG00000009100MSI110098.281ENSAPEG00000006857-8498.281Amphiprion_percula
ENSCVAG00000009100MSI110092.857ENSAPEG00000003245MSI110092.857Amphiprion_percula
ENSCVAG00000009100MSI110084.746ENSATEG00000023779-10084.746Anabas_testudineus
ENSCVAG00000009100MSI110094.085ENSATEG00000017059MSI110094.085Anabas_testudineus
ENSCVAG00000009100MSI110084.488ENSACAG00000002762MSI110085.319Anolis_carolinensis
ENSCVAG00000009100MSI19573.134ENSANAG00000027901-8884.965Aotus_nancymaae
ENSCVAG00000009100MSI110084.254ENSANAG00000027151MSI110084.254Aotus_nancymaae
ENSCVAG00000009100MSI110092.877ENSACLG00000011230MSI110092.877Astatotilapia_calliptera
ENSCVAG00000009100MSI110098.851ENSACLG00000000117-10099.388Astatotilapia_calliptera
ENSCVAG00000009100MSI19493.103ENSAMXG00000038960msi17693.103Astyanax_mexicanus
ENSCVAG00000009100MSI110084.254ENSBTAG00000009800MSI110087.267Bos_taurus
ENSCVAG00000009100MSI110084.254ENSCJAG00000008578MSI110087.307Callithrix_jacchus
ENSCVAG00000009100MSI110083.978ENSCAFG00000010283MSI110083.978Canis_familiaris
ENSCVAG00000009100MSI19486.174ENSCAFG00020020585MSI110086.174Canis_lupus_dingo
ENSCVAG00000009100MSI110082.016ENSCHIG00000024304MSI110082.016Capra_hircus
ENSCVAG00000009100MSI19485.321ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSCVAG00000009100MSI19476.997ENSCAPG00000003919MSI18976.997Cavia_aperea
ENSCVAG00000009100MSI19585.756ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSCVAG00000009100MSI110084.254ENSCCAG00000035567MSI110084.254Cebus_capucinus
ENSCVAG00000009100MSI110084.254ENSCATG00000030019MSI110084.254Cercocebus_atys
ENSCVAG00000009100MSI19485.965ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSCVAG00000009100MSI17488.934ENSCSAG00000002265MSI19684.116Chlorocebus_sabaeus
ENSCVAG00000009100MSI110087.749ENSCPBG00000011349MSI110087.749Chrysemys_picta_bellii
ENSCVAG00000009100MSI19485.366ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSCVAG00000009100MSI110084.254ENSCGRG00001018883Msi110084.254Cricetulus_griseus_chok1gshd
ENSCVAG00000009100MSI19485.410ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSCVAG00000009100MSI19494.481ENSCSEG00000011032MSI110094.481Cynoglossus_semilaevis
ENSCVAG00000009100MSI110092.000ENSCSEG00000005834-10092.000Cynoglossus_semilaevis
ENSCVAG00000009100MSI110097.414ENSCSEG00000008352-10097.414Cynoglossus_semilaevis
ENSCVAG00000009100MSI17993.023ENSDARG00000102015CABZ01037298.19893.023Danio_rerio
ENSCVAG00000009100MSI19494.257ENSDARG00000010710msi110094.860Danio_rerio
ENSCVAG00000009100MSI19482.595ENSDNOG00000005713MSI19182.595Dasypus_novemcinctus
ENSCVAG00000009100MSI19484.731ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSCVAG00000009100MSI19482.317ENSETEG00000004756MSI110082.317Echinops_telfairi
ENSCVAG00000009100MSI110085.423ENSEASG00005004736MSI110085.423Equus_asinus_asinus
ENSCVAG00000009100MSI110084.254ENSECAG00000017526MSI110084.254Equus_caballus
ENSCVAG00000009100MSI19689.583ENSELUG00000023219MSI19291.117Esox_lucius
ENSCVAG00000009100MSI19488.162ENSELUG00000023280-10087.850Esox_lucius
ENSCVAG00000009100MSI110084.254ENSFCAG00000011007MSI110084.254Felis_catus
ENSCVAG00000009100MSI19490.000ENSFALG00000007574MSI110090.000Ficedula_albicollis
ENSCVAG00000009100MSI19485.061ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSCVAG00000009100MSI110098.567ENSFHEG00000022446MSI110098.567Fundulus_heteroclitus
ENSCVAG00000009100MSI110092.857ENSFHEG00000003560-10092.857Fundulus_heteroclitus
ENSCVAG00000009100MSI110095.977ENSGMOG00000001006MSI19995.977Gadus_morhua
ENSCVAG00000009100MSI110083.616ENSGMOG00000017838-10083.616Gadus_morhua
ENSCVAG00000009100MSI19489.313ENSGALG00000007227MSI19876.882Gallus_gallus
ENSCVAG00000009100MSI110080.422ENSGAFG00000005860-10080.422Gambusia_affinis
ENSCVAG00000009100MSI19492.683ENSGAFG00000021522MSI19492.683Gambusia_affinis
ENSCVAG00000009100MSI110085.042ENSGACG00000008674-10085.042Gasterosteus_aculeatus
ENSCVAG00000009100MSI110096.562ENSGACG00000012679MSI110096.562Gasterosteus_aculeatus
ENSCVAG00000009100MSI110089.157ENSGAGG00000016037MSI110089.157Gopherus_agassizii
ENSCVAG00000009100MSI19485.987ENSGGOG00000010328MSI110085.987Gorilla_gorilla
ENSCVAG00000009100MSI110098.851ENSHBUG00000011841-10098.851Haplochromis_burtoni
ENSCVAG00000009100MSI110092.877ENSHBUG00000021921MSI110092.877Haplochromis_burtoni
ENSCVAG00000009100MSI110083.978ENSHGLG00000012782MSI110083.978Heterocephalus_glaber_female
ENSCVAG00000009100MSI19485.061ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSCVAG00000009100MSI110092.045ENSHCOG00000012067-10092.045Hippocampus_comes
ENSCVAG00000009100MSI19491.558ENSHCOG00000012019MSI110091.558Hippocampus_comes
ENSCVAG00000009100MSI110091.691ENSIPUG00000001976msi110091.691Ictalurus_punctatus
ENSCVAG00000009100MSI19486.174ENSSTOG00000009799MSI110086.174Ictidomys_tridecemlineatus
ENSCVAG00000009100MSI110084.254ENSJJAG00000010463Msi110084.254Jaculus_jaculus
ENSCVAG00000009100MSI110074.269ENSJJAG00000010643-10074.269Jaculus_jaculus
ENSCVAG00000009100MSI19492.857ENSKMAG00000019877-10092.857Kryptolebias_marmoratus
ENSCVAG00000009100MSI110097.126ENSKMAG00000011251MSI110097.126Kryptolebias_marmoratus
ENSCVAG00000009100MSI110092.857ENSLBEG00000001375-10092.857Labrus_bergylta
ENSCVAG00000009100MSI110097.708ENSLBEG00000008789MSI110097.708Labrus_bergylta
ENSCVAG00000009100MSI19484.211ENSLACG00000018287MSI110084.211Latimeria_chalumnae
ENSCVAG00000009100MSI15580.000ENSLOCG00000008618zgc:1107967180.000Lepisosteus_oculatus
ENSCVAG00000009100MSI19077.705ENSLAFG00000009412MSI110077.377Loxodonta_africana
ENSCVAG00000009100MSI19485.965ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSCVAG00000009100MSI19485.965ENSMMUG00000031527MSI19784.615Macaca_mulatta
ENSCVAG00000009100MSI110085.423ENSMNEG00000040034MSI110085.423Macaca_nemestrina
ENSCVAG00000009100MSI19485.366ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSCVAG00000009100MSI110092.286ENSMAMG00000018426-10092.286Mastacembelus_armatus
ENSCVAG00000009100MSI110097.989ENSMAMG00000002279MSI110097.989Mastacembelus_armatus
ENSCVAG00000009100MSI110092.877ENSMZEG00005026892MSI110092.877Maylandia_zebra
ENSCVAG00000009100MSI110098.851ENSMZEG00005000340-10098.851Maylandia_zebra
ENSCVAG00000009100MSI16794.675ENSMGAG00000016518-10094.675Meleagris_gallopavo
ENSCVAG00000009100MSI16891.964ENSMAUG00000016820Msi110089.712Mesocricetus_auratus
ENSCVAG00000009100MSI110084.254ENSMICG00000033181MSI110084.254Microcebus_murinus
ENSCVAG00000009100MSI110083.978ENSMOCG00000002286Msi110083.978Microtus_ochrogaster
ENSCVAG00000009100MSI110087.234ENSMMOG00000012265-10087.234Mola_mola
ENSCVAG00000009100MSI19491.586ENSMMOG00000010492MSI19691.586Mola_mola
ENSCVAG00000009100MSI19158.735ENSMODG00000003189-10058.735Monodelphis_domestica
ENSCVAG00000009100MSI19492.966ENSMALG00000001426-10092.966Monopterus_albus
ENSCVAG00000009100MSI110098.563ENSMALG00000017889MSI110098.563Monopterus_albus
ENSCVAG00000009100MSI110083.702MGP_CAROLIEiJ_G0027626Msi19889.354Mus_caroli
ENSCVAG00000009100MSI110083.702ENSMUSG00000054256Msi19889.354Mus_musculus
ENSCVAG00000009100MSI110086.571MGP_PahariEiJ_G0024206Msi19889.695Mus_pahari
ENSCVAG00000009100MSI110083.702MGP_SPRETEiJ_G0028624Msi19889.354Mus_spretus
ENSCVAG00000009100MSI19486.174ENSMPUG00000003168MSI110086.174Mustela_putorius_furo
ENSCVAG00000009100MSI19476.786ENSMLUG00000010313MSI110076.786Myotis_lucifugus
ENSCVAG00000009100MSI19485.410ENSNGAG00000014508Msi19185.410Nannospalax_galili
ENSCVAG00000009100MSI18985.246ENSNBRG00000018012MSI19985.246Neolamprologus_brichardi
ENSCVAG00000009100MSI110098.851ENSNBRG00000000841-10098.851Neolamprologus_brichardi
ENSCVAG00000009100MSI19075.915ENSNLEG00000015636MSI110075.915Nomascus_leucogenys
ENSCVAG00000009100MSI19465.244ENSMEUG00000015759MSI110065.244Notamacropus_eugenii
ENSCVAG00000009100MSI19178.413ENSOPRG00000016879MSI110078.413Ochotona_princeps
ENSCVAG00000009100MSI19485.366ENSODEG00000006328MSI110085.366Octodon_degus
ENSCVAG00000009100MSI110098.851ENSONIG00000011182MSI110098.851Oreochromis_niloticus
ENSCVAG00000009100MSI110089.560ENSONIG00000019452-10089.560Oreochromis_niloticus
ENSCVAG00000009100MSI19486.174ENSOCUG00000027716MSI110086.174Oryctolagus_cuniculus
ENSCVAG00000009100MSI110091.714ENSORLG00000029593MSI110091.714Oryzias_latipes
ENSCVAG00000009100MSI110098.854ENSORLG00000019978-10098.854Oryzias_latipes
ENSCVAG00000009100MSI110091.714ENSORLG00020008266MSI19991.167Oryzias_latipes_hni
ENSCVAG00000009100MSI110098.854ENSORLG00020001208-7198.854Oryzias_latipes_hni
ENSCVAG00000009100MSI110091.714ENSORLG00015003916MSI110091.714Oryzias_latipes_hsok
ENSCVAG00000009100MSI110098.854ENSORLG00015013672-7698.788Oryzias_latipes_hsok
ENSCVAG00000009100MSI110098.854ENSOMEG00000017536MSI110098.854Oryzias_melastigma
ENSCVAG00000009100MSI110092.000ENSOMEG00000002272-10092.000Oryzias_melastigma
ENSCVAG00000009100MSI19981.868ENSOGAG00000003847MSI19981.868Otolemur_garnettii
ENSCVAG00000009100MSI19482.727ENSOARG00000012097MSI110082.727Ovis_aries
ENSCVAG00000009100MSI19485.366ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSCVAG00000009100MSI110084.254ENSPPRG00000000370MSI110084.254Panthera_pardus
ENSCVAG00000009100MSI19486.174ENSPTIG00000008913MSI110086.174Panthera_tigris_altaica
ENSCVAG00000009100MSI110084.254ENSPTRG00000005531MSI110084.254Pan_troglodytes
ENSCVAG00000009100MSI110083.978ENSPANG00000006335MSI110083.978Papio_anubis
ENSCVAG00000009100MSI110094.225ENSPKIG00000016497MSI110094.225Paramormyrops_kingsleyae
ENSCVAG00000009100MSI110093.966ENSPKIG00000023575-10093.966Paramormyrops_kingsleyae
ENSCVAG00000009100MSI19486.585ENSPSIG00000011608-9386.585Pelodiscus_sinensis
ENSCVAG00000009100MSI15186.842ENSPSIG00000016295-9585.470Pelodiscus_sinensis
ENSCVAG00000009100MSI17981.579ENSPSIG00000009621-10081.579Pelodiscus_sinensis
ENSCVAG00000009100MSI19474.848ENSPMGG00000007743-9869.054Periophthalmus_magnuspinnatus
ENSCVAG00000009100MSI19099.324ENSPMGG00000000514MSI19799.324Periophthalmus_magnuspinnatus
ENSCVAG00000009100MSI19483.976ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSCVAG00000009100MSI110092.286ENSPFOG00000008319-8692.286Poecilia_formosa
ENSCVAG00000009100MSI110099.427ENSPFOG00000013113MSI110099.427Poecilia_formosa
ENSCVAG00000009100MSI110099.427ENSPLAG00000014025-10099.427Poecilia_latipinna
ENSCVAG00000009100MSI110092.286ENSPLAG00000012431-9792.286Poecilia_latipinna
ENSCVAG00000009100MSI110091.714ENSPMEG00000007025-9386.624Poecilia_mexicana
ENSCVAG00000009100MSI110099.427ENSPMEG00000012796MSI110099.427Poecilia_mexicana
ENSCVAG00000009100MSI17594.059ENSPREG00000014574-10094.059Poecilia_reticulata
ENSCVAG00000009100MSI19590.415ENSPREG00000021416-9590.415Poecilia_reticulata
ENSCVAG00000009100MSI110083.425ENSPPYG00000005027MSI110083.425Pongo_abelii
ENSCVAG00000009100MSI17689.848ENSPCAG00000002300MSI17289.848Procavia_capensis
ENSCVAG00000009100MSI110084.254ENSPCOG00000017341MSI110084.254Propithecus_coquereli
ENSCVAG00000009100MSI19469.817ENSPVAG00000002225MSI110069.817Pteropus_vampyrus
ENSCVAG00000009100MSI110092.877ENSPNYG00000004379MSI110092.877Pundamilia_nyererei
ENSCVAG00000009100MSI110098.851ENSPNYG00000002529-10098.851Pundamilia_nyererei
ENSCVAG00000009100MSI110092.264ENSPNAG00000019337msi110092.264Pygocentrus_nattereri
ENSCVAG00000009100MSI19485.852ENSRNOG00000001156Msi110085.852Rattus_norvegicus
ENSCVAG00000009100MSI19486.174ENSRBIG00000036889MSI110086.174Rhinopithecus_bieti
ENSCVAG00000009100MSI19485.152ENSRROG00000041076MSI19385.152Rhinopithecus_roxellana
ENSCVAG00000009100MSI19485.965ENSSBOG00000030259MSI19985.965Saimiri_boliviensis_boliviensis
ENSCVAG00000009100MSI19476.144ENSSHAG00000006834MSI110076.144Sarcophilus_harrisii
ENSCVAG00000009100MSI19494.817ENSSFOG00015014964-9594.817Scleropages_formosus
ENSCVAG00000009100MSI19494.498ENSSFOG00015005350MSI110094.498Scleropages_formosus
ENSCVAG00000009100MSI19498.653ENSSMAG00000018824MSI19798.653Scophthalmus_maximus
ENSCVAG00000009100MSI19493.487ENSSMAG00000009156-7392.079Scophthalmus_maximus
ENSCVAG00000009100MSI110093.143ENSSDUG00000022697-10093.143Seriola_dumerili
ENSCVAG00000009100MSI110098.281ENSSDUG00000001027MSI110098.281Seriola_dumerili
ENSCVAG00000009100MSI110084.548ENSSLDG00000018706-10084.548Seriola_lalandi_dorsalis
ENSCVAG00000009100MSI110098.281ENSSLDG00000016832MSI110098.281Seriola_lalandi_dorsalis
ENSCVAG00000009100MSI110087.464ENSSPUG00000015741MSI110087.464Sphenodon_punctatus
ENSCVAG00000009100MSI15785.625ENSSPAG00000015573zgc:1107968285.625Stegastes_partitus
ENSCVAG00000009100MSI17588.482ENSSPAG00000014085-10088.482Stegastes_partitus
ENSCVAG00000009100MSI19493.871ENSSPAG00000013098-10093.598Stegastes_partitus
ENSCVAG00000009100MSI110085.131ENSSSCG00000029365MSI110085.852Sus_scrofa
ENSCVAG00000009100MSI19487.059ENSTGUG00000009534MSI110087.059Taeniopygia_guttata
ENSCVAG00000009100MSI18987.352ENSTRUG00000016249MSI19790.698Takifugu_rubripes
ENSCVAG00000009100MSI19486.486ENSTRUG00000015636-7986.486Takifugu_rubripes
ENSCVAG00000009100MSI15390.722ENSTRUG00000021586-9990.722Takifugu_rubripes
ENSCVAG00000009100MSI19966.465ENSTNIG00000019814-9966.465Tetraodon_nigroviridis
ENSCVAG00000009100MSI110093.732ENSTNIG00000011469MSI110093.732Tetraodon_nigroviridis
ENSCVAG00000009100MSI19475.824ENSTBEG00000007182MSI110075.824Tupaia_belangeri
ENSCVAG00000009100MSI17689.474ENSTTRG00000005663MSI17889.474Tursiops_truncatus
ENSCVAG00000009100MSI17586.175ENSUAMG00000015514MSI19488.426Ursus_americanus
ENSCVAG00000009100MSI19483.557ENSUMAG00000006176MSI18883.557Ursus_maritimus
ENSCVAG00000009100MSI19485.410ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSCVAG00000009100MSI110086.494ENSXETG00000012216msi110086.494Xenopus_tropicalis
ENSCVAG00000009100MSI19480.259ENSXCOG00000017605MSI18980.259Xiphophorus_couchianus
ENSCVAG00000009100MSI110092.000ENSXMAG00000018237-10092.000Xiphophorus_maculatus
ENSCVAG00000009100MSI110099.425ENSXMAG00000027103MSI110091.369Xiphophorus_maculatus

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