EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000009201 (Gene tree)
Gene ID: 107098795
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 53566 bases
Position: chrKL652527.1:1189031-1242596
Accession: 107098795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007524	RrnaAD	PF00398.20	3.3e-39	1	1
ENSCVAP00000007541	RrnaAD	PF00398.20	3.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003145	-	3122	-	ENSCVAP00000007524	352 (aa)	-	UPI000742C60C
ENSCVAT00000003129	-	3104	XM_015396645	ENSCVAP00000007541	352 (aa)	XP_015252131	UPI000742C60C

Gene Model

Click here to download ENSCVAG00000009201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009201	tfb1m	97	67.449	ENSG00000029639	TFB1M	99	67.449	Homo_sapiens
ENSCVAG00000009201	tfb1m	97	85.965	ENSAPOG00000015493	tfb1m	96	85.965	Acanthochromis_polyacanthus
ENSCVAG00000009201	tfb1m	95	66.567	ENSAMEG00000012761	TFB1M	97	66.567	Ailuropoda_melanoleuca
ENSCVAG00000009201	tfb1m	99	82.521	ENSACIG00000014290	tfb1m	99	82.521	Amphilophus_citrinellus
ENSCVAG00000009201	tfb1m	97	85.380	ENSAOCG00000004027	tfb1m	96	85.380	Amphiprion_ocellaris
ENSCVAG00000009201	tfb1m	97	85.380	ENSAPEG00000020359	tfb1m	96	85.380	Amphiprion_percula
ENSCVAG00000009201	tfb1m	99	82.571	ENSATEG00000006826	tfb1m	99	82.571	Anabas_testudineus
ENSCVAG00000009201	tfb1m	51	31.111	ENSAPLG00000009464	DIMT1	61	31.111	Anas_platyrhynchos
ENSCVAG00000009201	tfb1m	96	67.456	ENSAPLG00000006328	TFB1M	96	67.456	Anas_platyrhynchos
ENSCVAG00000009201	tfb1m	93	70.948	ENSACAG00000005244	TFB1M	95	70.948	Anolis_carolinensis
ENSCVAG00000009201	tfb1m	93	70.213	ENSANAG00000021469	TFB1M	95	70.213	Aotus_nancymaae
ENSCVAG00000009201	tfb1m	96	85.757	ENSACLG00000018734	tfb1m	94	85.757	Astatotilapia_calliptera
ENSCVAG00000009201	tfb1m	96	76.471	ENSAMXG00000036128	tfb1m	93	76.471	Astyanax_mexicanus
ENSCVAG00000009201	tfb1m	93	70.642	ENSBTAG00000031895	TFB1M	98	73.423	Bos_taurus
ENSCVAG00000009201	tfb1m	57	30.198	WBGene00008455	E02H1.1	57	30.198	Caenorhabditis_elegans
ENSCVAG00000009201	tfb1m	90	43.302	WBGene00020189	tfbm-1	87	43.302	Caenorhabditis_elegans
ENSCVAG00000009201	tfb1m	93	70.213	ENSCJAG00000012540	TFB1M	96	70.213	Callithrix_jacchus
ENSCVAG00000009201	tfb1m	97	67.059	ENSCAFG00000000581	TFB1M	98	67.059	Canis_familiaris
ENSCVAG00000009201	tfb1m	97	67.059	ENSCAFG00020015224	TFB1M	98	67.059	Canis_lupus_dingo
ENSCVAG00000009201	tfb1m	93	70.336	ENSCHIG00000017013	TFB1M	98	70.336	Capra_hircus
ENSCVAG00000009201	tfb1m	93	69.419	ENSTSYG00000012298	TFB1M	95	69.419	Carlito_syrichta
ENSCVAG00000009201	tfb1m	66	49.573	ENSCAPG00000013843	TFB1M	78	49.573	Cavia_aperea
ENSCVAG00000009201	tfb1m	93	68.693	ENSCPOG00000030422	TFB1M	95	68.693	Cavia_porcellus
ENSCVAG00000009201	tfb1m	93	70.213	ENSCCAG00000015250	TFB1M	95	70.213	Cebus_capucinus
ENSCVAG00000009201	tfb1m	95	47.164	ENSCATG00000009009	TFB1M	96	47.164	Cercocebus_atys
ENSCVAG00000009201	tfb1m	93	69.419	ENSCLAG00000004500	TFB1M	95	69.419	Chinchilla_lanigera
ENSCVAG00000009201	tfb1m	92	69.969	ENSCSAG00000013259	TFB1M	99	67.742	Chlorocebus_sabaeus
ENSCVAG00000009201	tfb1m	93	67.073	ENSCHOG00000011245	TFB1M	95	67.073	Choloepus_hoffmanni
ENSCVAG00000009201	tfb1m	91	72.897	ENSCPBG00000016320	TFB1M	94	72.897	Chrysemys_picta_bellii
ENSCVAG00000009201	tfb1m	88	46.945	ENSCING00000003901	-	81	46.945	Ciona_intestinalis
ENSCVAG00000009201	tfb1m	89	48.265	ENSCSAVG00000004721	-	83	48.265	Ciona_savignyi
ENSCVAG00000009201	tfb1m	93	69.909	ENSCANG00000029768	TFB1M	98	69.909	Colobus_angolensis_palliatus
ENSCVAG00000009201	tfb1m	93	68.502	ENSCGRG00001022866	Tfb1m	95	68.502	Cricetulus_griseus_chok1gshd
ENSCVAG00000009201	tfb1m	89	68.910	ENSCGRG00000018084	Tfb1m	95	68.910	Cricetulus_griseus_crigri
ENSCVAG00000009201	tfb1m	100	78.754	ENSCSEG00000000131	tfb1m	99	78.754	Cynoglossus_semilaevis
ENSCVAG00000009201	tfb1m	95	72.239	ENSDARG00000040727	tfb1m	98	78.030	Danio_rerio
ENSCVAG00000009201	tfb1m	97	67.826	ENSDNOG00000015984	-	95	67.826	Dasypus_novemcinctus
ENSCVAG00000009201	tfb1m	82	58.885	ENSDNOG00000032672	-	99	58.885	Dasypus_novemcinctus
ENSCVAG00000009201	tfb1m	93	69.725	ENSDORG00000012938	Tfb1m	94	69.725	Dipodomys_ordii
ENSCVAG00000009201	tfb1m	52	30.159	FBgn0039627	CG11837	53	30.159	Drosophila_melanogaster
ENSCVAG00000009201	tfb1m	90	47.664	FBgn0261381	mtTFB1	95	47.664	Drosophila_melanogaster
ENSCVAG00000009201	tfb1m	93	47.866	ENSETEG00000005709	TFB1M	94	47.866	Echinops_telfairi
ENSCVAG00000009201	tfb1m	58	30.435	ENSEBUG00000006158	dimt1l	77	30.435	Eptatretus_burgeri
ENSCVAG00000009201	tfb1m	92	54.462	ENSEBUG00000010530	tfb1m	92	54.434	Eptatretus_burgeri
ENSCVAG00000009201	tfb1m	95	67.262	ENSEASG00005018887	TFB1M	96	67.262	Equus_asinus_asinus
ENSCVAG00000009201	tfb1m	95	68.155	ENSECAG00000020997	TFB1M	96	68.155	Equus_caballus
ENSCVAG00000009201	tfb1m	93	70.948	ENSEEUG00000014899	TFB1M	97	70.948	Erinaceus_europaeus
ENSCVAG00000009201	tfb1m	95	79.580	ENSELUG00000002752	tfb1m	85	79.580	Esox_lucius
ENSCVAG00000009201	tfb1m	97	66.471	ENSFCAG00000038785	TFB1M	98	66.471	Felis_catus
ENSCVAG00000009201	tfb1m	98	64.826	ENSFALG00000012500	TFB1M	99	64.826	Ficedula_albicollis
ENSCVAG00000009201	tfb1m	61	30.415	ENSFALG00000011081	DIMT1	63	30.415	Ficedula_albicollis
ENSCVAG00000009201	tfb1m	91	69.688	ENSFDAG00000016985	TFB1M	94	69.470	Fukomys_damarensis
ENSCVAG00000009201	tfb1m	100	93.182	ENSFHEG00000008407	tfb1m	100	93.182	Fundulus_heteroclitus
ENSCVAG00000009201	tfb1m	96	79.351	ENSGMOG00000018738	tfb1m	97	79.351	Gadus_morhua
ENSCVAG00000009201	tfb1m	90	70.032	ENSGALG00000013647	TFB1M	93	69.325	Gallus_gallus
ENSCVAG00000009201	tfb1m	100	91.761	ENSGAFG00000017997	tfb1m	100	91.761	Gambusia_affinis
ENSCVAG00000009201	tfb1m	100	82.203	ENSGACG00000006884	tfb1m	100	82.203	Gasterosteus_aculeatus
ENSCVAG00000009201	tfb1m	95	70.448	ENSGAGG00000025345	TFB1M	97	70.448	Gopherus_agassizii
ENSCVAG00000009201	tfb1m	97	67.449	ENSGGOG00000012189	TFB1M	99	67.449	Gorilla_gorilla
ENSCVAG00000009201	tfb1m	96	85.460	ENSHBUG00000019396	tfb1m	94	85.460	Haplochromis_burtoni
ENSCVAG00000009201	tfb1m	98	67.630	ENSHGLG00000002028	TFB1M	99	67.630	Heterocephalus_glaber_female
ENSCVAG00000009201	tfb1m	98	67.630	ENSHGLG00100001412	TFB1M	99	67.630	Heterocephalus_glaber_male
ENSCVAG00000009201	tfb1m	99	77.778	ENSHCOG00000014135	tfb1m	99	77.778	Hippocampus_comes
ENSCVAG00000009201	tfb1m	57	30.049	ENSHCOG00000015252	dimt1l	62	30.049	Hippocampus_comes
ENSCVAG00000009201	tfb1m	93	75.841	ENSIPUG00000010964	tfb1m	96	75.841	Ictalurus_punctatus
ENSCVAG00000009201	tfb1m	97	68.529	ENSSTOG00000026264	TFB1M	98	68.529	Ictidomys_tridecemlineatus
ENSCVAG00000009201	tfb1m	95	68.155	ENSJJAG00000022171	Tfb1m	95	68.155	Jaculus_jaculus
ENSCVAG00000009201	tfb1m	100	83.523	ENSKMAG00000012667	tfb1m	100	83.523	Kryptolebias_marmoratus
ENSCVAG00000009201	tfb1m	57	30.049	ENSLBEG00000015328	dimt1l	58	30.049	Labrus_bergylta
ENSCVAG00000009201	tfb1m	100	82.633	ENSLBEG00000011505	tfb1m	100	82.633	Labrus_bergylta
ENSCVAG00000009201	tfb1m	93	73.620	ENSLACG00000012594	TFB1M	93	73.620	Latimeria_chalumnae
ENSCVAG00000009201	tfb1m	57	30.049	ENSLOCG00000007837	dimt1l	58	30.049	Lepisosteus_oculatus
ENSCVAG00000009201	tfb1m	95	67.953	ENSLOCG00000016850	tfb1m	96	67.953	Lepisosteus_oculatus
ENSCVAG00000009201	tfb1m	93	69.632	ENSLAFG00000014035	-	95	69.419	Loxodonta_africana
ENSCVAG00000009201	tfb1m	91	56.832	ENSLAFG00000032309	-	100	56.832	Loxodonta_africana
ENSCVAG00000009201	tfb1m	95	68.955	ENSMFAG00000031968	TFB1M	97	68.955	Macaca_fascicularis
ENSCVAG00000009201	tfb1m	95	68.657	ENSMMUG00000011171	TFB1M	97	68.657	Macaca_mulatta
ENSCVAG00000009201	tfb1m	95	68.955	ENSMNEG00000042278	TFB1M	97	68.955	Macaca_nemestrina
ENSCVAG00000009201	tfb1m	95	69.552	ENSMLEG00000000044	TFB1M	97	69.552	Mandrillus_leucophaeus
ENSCVAG00000009201	tfb1m	99	83.191	ENSMAMG00000009423	tfb1m	99	83.191	Mastacembelus_armatus
ENSCVAG00000009201	tfb1m	96	85.757	ENSMZEG00005005640	tfb1m	89	85.757	Maylandia_zebra
ENSCVAG00000009201	tfb1m	73	74.219	ENSMGAG00000012779	TFB1M	100	73.208	Meleagris_gallopavo
ENSCVAG00000009201	tfb1m	59	30.332	ENSMGAG00000004307	DIMT1	58	30.332	Meleagris_gallopavo
ENSCVAG00000009201	tfb1m	93	70.552	ENSMAUG00000006705	Tfb1m	94	70.552	Mesocricetus_auratus
ENSCVAG00000009201	tfb1m	93	70.642	ENSMICG00000045849	TFB1M	95	70.642	Microcebus_murinus
ENSCVAG00000009201	tfb1m	93	69.632	ENSMOCG00000013879	Tfb1m	95	69.419	Microtus_ochrogaster
ENSCVAG00000009201	tfb1m	57	30.049	ENSMMOG00000018241	dimt1l	58	30.049	Mola_mola
ENSCVAG00000009201	tfb1m	97	85.380	ENSMMOG00000002203	tfb1m	96	85.380	Mola_mola
ENSCVAG00000009201	tfb1m	93	69.325	ENSMODG00000008169	TFB1M	95	69.113	Monodelphis_domestica
ENSCVAG00000009201	tfb1m	98	81.503	ENSMALG00000011657	tfb1m	92	81.503	Monopterus_albus
ENSCVAG00000009201	tfb1m	93	69.419	MGP_CAROLIEiJ_G0021018	Tfb1m	95	69.419	Mus_caroli
ENSCVAG00000009201	tfb1m	93	69.419	ENSMUSG00000036983	Tfb1m	95	69.419	Mus_musculus
ENSCVAG00000009201	tfb1m	93	70.552	MGP_PahariEiJ_G0023336	Tfb1m	95	70.336	Mus_pahari
ENSCVAG00000009201	tfb1m	93	69.419	MGP_SPRETEiJ_G0021923	Tfb1m	95	69.419	Mus_spretus
ENSCVAG00000009201	tfb1m	97	66.176	ENSMPUG00000002073	TFB1M	98	66.176	Mustela_putorius_furo
ENSCVAG00000009201	tfb1m	93	69.419	ENSMLUG00000011329	TFB1M	95	69.419	Myotis_lucifugus
ENSCVAG00000009201	tfb1m	93	68.997	ENSNGAG00000015154	Tfb1m	92	68.997	Nannospalax_galili
ENSCVAG00000009201	tfb1m	96	85.757	ENSNBRG00000009004	tfb1m	94	85.757	Neolamprologus_brichardi
ENSCVAG00000009201	tfb1m	97	67.449	ENSNLEG00000034352	TFB1M	99	67.449	Nomascus_leucogenys
ENSCVAG00000009201	tfb1m	93	56.881	ENSMEUG00000001699	-	94	56.881	Notamacropus_eugenii
ENSCVAG00000009201	tfb1m	93	53.517	ENSOPRG00000008921	TFB1M	96	53.517	Ochotona_princeps
ENSCVAG00000009201	tfb1m	93	68.196	ENSODEG00000005915	TFB1M	94	68.196	Octodon_degus
ENSCVAG00000009201	tfb1m	96	86.647	ENSONIG00000008109	tfb1m	97	86.647	Oreochromis_niloticus
ENSCVAG00000009201	tfb1m	93	68.502	ENSOCUG00000012154	TFB1M	96	68.502	Oryctolagus_cuniculus
ENSCVAG00000009201	tfb1m	97	83.578	ENSORLG00000017328	tfb1m	83	83.578	Oryzias_latipes
ENSCVAG00000009201	tfb1m	97	83.871	ENSORLG00020002250	tfb1m	99	83.871	Oryzias_latipes_hni
ENSCVAG00000009201	tfb1m	97	83.578	ENSORLG00015016067	tfb1m	99	83.578	Oryzias_latipes_hsok
ENSCVAG00000009201	tfb1m	100	82.386	ENSOMEG00000015641	tfb1m	100	82.386	Oryzias_melastigma
ENSCVAG00000009201	tfb1m	93	66.970	ENSOGAG00000011681	TFB1M	96	66.970	Otolemur_garnettii
ENSCVAG00000009201	tfb1m	93	69.069	ENSOARG00000004216	TFB1M	98	69.069	Ovis_aries
ENSCVAG00000009201	tfb1m	93	69.301	ENSPPAG00000030834	TFB1M	95	69.301	Pan_paniscus
ENSCVAG00000009201	tfb1m	95	66.667	ENSPPRG00000013578	TFB1M	97	66.667	Panthera_pardus
ENSCVAG00000009201	tfb1m	97	66.176	ENSPTIG00000003540	TFB1M	98	66.176	Panthera_tigris_altaica
ENSCVAG00000009201	tfb1m	97	67.742	ENSPTRG00000018730	TFB1M	99	67.742	Pan_troglodytes
ENSCVAG00000009201	tfb1m	95	69.254	ENSPANG00000007489	TFB1M	97	69.254	Papio_anubis
ENSCVAG00000009201	tfb1m	97	75.219	ENSPKIG00000021117	tfb1m	97	75.219	Paramormyrops_kingsleyae
ENSCVAG00000009201	tfb1m	57	30.049	ENSPKIG00000017870	dimt1l	58	30.049	Paramormyrops_kingsleyae
ENSCVAG00000009201	tfb1m	93	72.171	ENSPSIG00000006643	TFB1M	96	72.171	Pelodiscus_sinensis
ENSCVAG00000009201	tfb1m	95	82.883	ENSPMGG00000011289	tfb1m	96	82.883	Periophthalmus_magnuspinnatus
ENSCVAG00000009201	tfb1m	93	68.502	ENSPEMG00000010410	Tfb1m	95	68.502	Peromyscus_maniculatus_bairdii
ENSCVAG00000009201	tfb1m	56	65.482	ENSPMAG00000008056	tfb1m	93	63.942	Petromyzon_marinus
ENSCVAG00000009201	tfb1m	93	69.419	ENSPCIG00000001010	TFB1M	91	69.419	Phascolarctos_cinereus
ENSCVAG00000009201	tfb1m	100	90.395	ENSPFOG00000005139	tfb1m	100	90.395	Poecilia_formosa
ENSCVAG00000009201	tfb1m	100	90.909	ENSPLAG00000021410	tfb1m	100	90.909	Poecilia_latipinna
ENSCVAG00000009201	tfb1m	100	90.625	ENSPMEG00000020166	tfb1m	100	90.625	Poecilia_mexicana
ENSCVAG00000009201	tfb1m	100	90.625	ENSPREG00000022392	tfb1m	100	90.625	Poecilia_reticulata
ENSCVAG00000009201	tfb1m	97	65.497	ENSPPYG00000017123	TFB1M	99	65.497	Pongo_abelii
ENSCVAG00000009201	tfb1m	84	55.369	ENSPCAG00000007078	TFB1M	99	55.369	Procavia_capensis
ENSCVAG00000009201	tfb1m	93	70.948	ENSPCOG00000028453	TFB1M	95	70.948	Propithecus_coquereli
ENSCVAG00000009201	tfb1m	93	70.336	ENSPVAG00000015818	TFB1M	95	70.336	Pteropus_vampyrus
ENSCVAG00000009201	tfb1m	96	85.757	ENSPNYG00000007330	tfb1m	94	85.757	Pundamilia_nyererei
ENSCVAG00000009201	tfb1m	94	75.758	ENSPNAG00000007507	tfb1m	93	75.758	Pygocentrus_nattereri
ENSCVAG00000009201	tfb1m	93	70.336	ENSRNOG00000056223	Tfb1m	95	70.336	Rattus_norvegicus
ENSCVAG00000009201	tfb1m	93	70.213	ENSRBIG00000039975	TFB1M	98	70.213	Rhinopithecus_bieti
ENSCVAG00000009201	tfb1m	93	69.909	ENSRROG00000033802	TFB1M	98	69.909	Rhinopithecus_roxellana
ENSCVAG00000009201	tfb1m	93	69.909	ENSSBOG00000008663	TFB1M	95	69.909	Saimiri_boliviensis_boliviensis
ENSCVAG00000009201	tfb1m	91	62.069	ENSSHAG00000013259	TFB1M	93	62.069	Sarcophilus_harrisii
ENSCVAG00000009201	tfb1m	100	71.023	ENSSFOG00015009739	tfb1m	100	71.023	Scleropages_formosus
ENSCVAG00000009201	tfb1m	99	82.235	ENSSMAG00000008229	tfb1m	99	82.235	Scophthalmus_maximus
ENSCVAG00000009201	tfb1m	57	30.049	ENSSMAG00000010122	dimt1l	58	30.049	Scophthalmus_maximus
ENSCVAG00000009201	tfb1m	100	82.633	ENSSDUG00000011871	tfb1m	100	82.633	Seriola_dumerili
ENSCVAG00000009201	tfb1m	100	82.073	ENSSLDG00000023923	tfb1m	100	82.073	Seriola_lalandi_dorsalis
ENSCVAG00000009201	tfb1m	63	70.721	ENSSARG00000003159	TFB1M	100	70.721	Sorex_araneus
ENSCVAG00000009201	tfb1m	98	65.217	ENSSPUG00000015253	TFB1M	100	65.217	Sphenodon_punctatus
ENSCVAG00000009201	tfb1m	57	30.049	ENSSPAG00000021538	dimt1l	58	30.049	Stegastes_partitus
ENSCVAG00000009201	tfb1m	98	84.971	ENSSPAG00000019515	tfb1m	97	84.971	Stegastes_partitus
ENSCVAG00000009201	tfb1m	93	69.419	ENSSSCG00000024361	TFB1M	96	69.419	Sus_scrofa
ENSCVAG00000009201	tfb1m	95	66.467	ENSTGUG00000011136	TFB1M	97	66.467	Taeniopygia_guttata
ENSCVAG00000009201	tfb1m	59	30.332	ENSTGUG00000002749	DIMT1	64	30.332	Taeniopygia_guttata
ENSCVAG00000009201	tfb1m	57	30.049	ENSTRUG00000008885	dimt1l	58	30.049	Takifugu_rubripes
ENSCVAG00000009201	tfb1m	98	84.593	ENSTRUG00000020334	tfb1m	97	84.593	Takifugu_rubripes
ENSCVAG00000009201	tfb1m	63	85.455	ENSTNIG00000016882	tfb1m	97	85.455	Tetraodon_nigroviridis
ENSCVAG00000009201	tfb1m	93	67.584	ENSTBEG00000008769	TFB1M	94	67.584	Tupaia_belangeri
ENSCVAG00000009201	tfb1m	93	70.336	ENSTTRG00000006327	TFB1M	97	70.336	Tursiops_truncatus
ENSCVAG00000009201	tfb1m	93	67.485	ENSUAMG00000017802	TFB1M	95	66.269	Ursus_americanus
ENSCVAG00000009201	tfb1m	95	66.866	ENSUMAG00000013377	TFB1M	87	66.866	Ursus_maritimus
ENSCVAG00000009201	tfb1m	93	69.113	ENSVPAG00000010148	TFB1M	96	69.113	Vicugna_pacos
ENSCVAG00000009201	tfb1m	95	67.463	ENSVVUG00000007643	TFB1M	98	67.463	Vulpes_vulpes
ENSCVAG00000009201	tfb1m	94	72.508	ENSXETG00000007852	tfb1m	96	72.508	Xenopus_tropicalis
ENSCVAG00000009201	tfb1m	100	92.045	ENSXCOG00000013230	tfb1m	100	92.045	Xiphophorus_couchianus
ENSCVAG00000009201	tfb1m	100	92.330	ENSXMAG00000019222	tfb1m	100	92.330	Xiphophorus_maculatus