EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009207 (Gene tree)
Gene ID: 107091641
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: zinc finger protein 36%2C C3H1 type-like 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3750 bases
Position: chrKL652845.1:460274-464023
Accession: 107091641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024856	zf-CCCH	PF00642.24	9.8e-23	1	2
ENSCVAP00000024856	zf-CCCH	PF00642.24	9.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003118	-	3363	XM_015385685	ENSCVAP00000024856	415 (aa)	XP_015241171	UPI000742826E

Gene Model

Click here to download ENSCVAG00000009207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009207	sb:cb81	63	45.038	ENSCVAG00000008482	zfp36l1a	62	41.887
ENSCVAG00000009207	sb:cb81	80	40.054	ENSCVAG00000018571	zgc:162730	90	38.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009207	sb:cb81	90	36.508	ENSAPOG00000020931	zfp36l1a	62	43.295	Acanthochromis_polyacanthus
ENSCVAG00000009207	sb:cb81	72	38.623	ENSAPOG00000014920	zgc:162730	85	33.668	Acanthochromis_polyacanthus
ENSCVAG00000009207	sb:cb81	95	67.595	ENSAPOG00000011209	sb:cb81	99	67.089	Acanthochromis_polyacanthus
ENSCVAG00000009207	sb:cb81	72	41.411	ENSAPOG00000014912	zgc:114130	64	41.000	Acanthochromis_polyacanthus
ENSCVAG00000009207	sb:cb81	62	46.792	ENSACIG00000016314	zfp36l1a	67	43.939	Amphilophus_citrinellus
ENSCVAG00000009207	sb:cb81	100	74.413	ENSACIG00000009027	sb:cb81	100	74.883	Amphilophus_citrinellus
ENSCVAG00000009207	sb:cb81	100	68.585	ENSAOCG00000024158	sb:cb81	100	67.146	Amphiprion_ocellaris
ENSCVAG00000009207	sb:cb81	73	39.169	ENSAOCG00000022227	zgc:114130	64	39.867	Amphiprion_ocellaris
ENSCVAG00000009207	sb:cb81	90	36.772	ENSAOCG00000019239	zfp36l1a	62	43.295	Amphiprion_ocellaris
ENSCVAG00000009207	sb:cb81	73	39.169	ENSAPEG00000015497	zgc:114130	64	41.333	Amphiprion_percula
ENSCVAG00000009207	sb:cb81	90	36.772	ENSAPEG00000010246	zfp36l1a	62	43.295	Amphiprion_percula
ENSCVAG00000009207	sb:cb81	100	68.585	ENSAPEG00000022405	sb:cb81	100	67.866	Amphiprion_percula
ENSCVAG00000009207	sb:cb81	73	39.640	ENSATEG00000008781	zgc:114130	66	41.639	Anabas_testudineus
ENSCVAG00000009207	sb:cb81	62	46.154	ENSATEG00000004546	zfp36l1a	62	45.594	Anabas_testudineus
ENSCVAG00000009207	sb:cb81	100	76.761	ENSATEG00000003462	sb:cb81	100	76.056	Anabas_testudineus
ENSCVAG00000009207	sb:cb81	62	44.615	ENSACLG00000007768	zfp36l1a	62	39.850	Astatotilapia_calliptera
ENSCVAG00000009207	sb:cb81	100	75.000	ENSACLG00000013759	sb:cb81	100	76.056	Astatotilapia_calliptera
ENSCVAG00000009207	sb:cb81	100	52.791	ENSAMXG00000034874	sb:cb81	100	53.147	Astyanax_mexicanus
ENSCVAG00000009207	sb:cb81	100	39.030	ENSAMXG00000038581	zgc:114130	95	39.171	Astyanax_mexicanus
ENSCVAG00000009207	sb:cb81	62	46.183	ENSAMXG00000036093	zfp36l1a	62	43.678	Astyanax_mexicanus
ENSCVAG00000009207	sb:cb81	62	71.845	ENSAMXG00000029887	zfp36l1b	64	43.382	Astyanax_mexicanus
ENSCVAG00000009207	sb:cb81	62	42.391	ENSCPBG00000021516	ZFP36L1	67	41.606	Chrysemys_picta_bellii
ENSCVAG00000009207	sb:cb81	80	36.827	ENSCSEG00000018283	zgc:162730	97	36.207	Cynoglossus_semilaevis
ENSCVAG00000009207	sb:cb81	70	40.439	ENSCSEG00000018290	zgc:114130	60	39.789	Cynoglossus_semilaevis
ENSCVAG00000009207	sb:cb81	100	69.495	ENSCSEG00000014426	sb:cb81	86	69.495	Cynoglossus_semilaevis
ENSCVAG00000009207	sb:cb81	62	44.528	ENSDARG00000103720	zgc:162730	92	34.454	Danio_rerio
ENSCVAG00000009207	sb:cb81	100	55.476	ENSDARG00000040503	sb:cb81	100	55.714	Danio_rerio
ENSCVAG00000009207	sb:cb81	73	42.308	ENSDARG00000040725	zgc:114130	96	37.558	Danio_rerio
ENSCVAG00000009207	sb:cb81	97	34.314	ENSELUG00000013158	zgc:162730	80	35.671	Esox_lucius
ENSCVAG00000009207	sb:cb81	100	39.535	ENSELUG00000013151	zgc:114130	97	38.761	Esox_lucius
ENSCVAG00000009207	sb:cb81	90	39.578	ENSELUG00000008675	zfp36l1b	80	36.316	Esox_lucius
ENSCVAG00000009207	sb:cb81	100	58.333	ENSELUG00000013045	sb:cb81	100	57.639	Esox_lucius
ENSCVAG00000009207	sb:cb81	93	37.778	ENSELUG00000021506	zfp36l1a	61	42.322	Esox_lucius
ENSCVAG00000009207	sb:cb81	79	38.764	ENSFHEG00000013710	zgc:162730	88	37.275	Fundulus_heteroclitus
ENSCVAG00000009207	sb:cb81	100	84.928	ENSFHEG00000022187	sb:cb81	100	85.646	Fundulus_heteroclitus
ENSCVAG00000009207	sb:cb81	62	45.174	ENSFHEG00000001313	zfp36l1a	62	42.642	Fundulus_heteroclitus
ENSCVAG00000009207	sb:cb81	63	58.935	ENSGMOG00000016803	sb:cb81	90	60.687	Gadus_morhua
ENSCVAG00000009207	sb:cb81	77	37.283	ENSGMOG00000017242	zgc:162730	100	35.511	Gadus_morhua
ENSCVAG00000009207	sb:cb81	79	38.764	ENSGAFG00000009953	zgc:162730	88	36.340	Gambusia_affinis
ENSCVAG00000009207	sb:cb81	63	46.008	ENSGAFG00000018711	zfp36l1a	61	41.353	Gambusia_affinis
ENSCVAG00000009207	sb:cb81	99	73.077	ENSGAFG00000015700	sb:cb81	100	73.317	Gambusia_affinis
ENSCVAG00000009207	sb:cb81	82	69.075	ENSGACG00000013400	sb:cb81	100	68.786	Gasterosteus_aculeatus
ENSCVAG00000009207	sb:cb81	71	41.214	ENSGACG00000008351	zgc:162730	53	44.693	Gasterosteus_aculeatus
ENSCVAG00000009207	sb:cb81	62	48.659	ENSGACG00000011271	zfp36l1a	66	42.105	Gasterosteus_aculeatus
ENSCVAG00000009207	sb:cb81	62	43.116	ENSGAGG00000007315	ZFP36L1	67	41.241	Gopherus_agassizii
ENSCVAG00000009207	sb:cb81	62	44.615	ENSHBUG00000016051	zfp36l1a	62	39.850	Haplochromis_burtoni
ENSCVAG00000009207	sb:cb81	100	75.701	ENSHBUG00000002383	sb:cb81	100	76.636	Haplochromis_burtoni
ENSCVAG00000009207	sb:cb81	100	47.598	ENSHCOG00000000792	sb:cb81	96	47.598	Hippocampus_comes
ENSCVAG00000009207	sb:cb81	73	40.498	ENSHCOG00000015800	zgc:114130	61	39.785	Hippocampus_comes
ENSCVAG00000009207	sb:cb81	62	45.788	ENSHCOG00000013932	zfp36l1a	65	44.485	Hippocampus_comes
ENSCVAG00000009207	sb:cb81	53	39.744	ENSHCOG00000012747	zfp36l1b	92	37.069	Hippocampus_comes
ENSCVAG00000009207	sb:cb81	67	58.947	ENSIPUG00000011378	sb:cb81	100	50.118	Ictalurus_punctatus
ENSCVAG00000009207	sb:cb81	99	36.730	ENSIPUG00000018256	zgc:114130	79	35.545	Ictalurus_punctatus
ENSCVAG00000009207	sb:cb81	64	42.140	ENSKMAG00000019287	zgc:114130	62	42.140	Kryptolebias_marmoratus
ENSCVAG00000009207	sb:cb81	100	75.414	ENSKMAG00000009884	sb:cb81	100	76.832	Kryptolebias_marmoratus
ENSCVAG00000009207	sb:cb81	62	46.360	ENSKMAG00000013156	zfp36l1a	62	44.828	Kryptolebias_marmoratus
ENSCVAG00000009207	sb:cb81	72	39.877	ENSLBEG00000018387	zgc:114130	71	39.692	Labrus_bergylta
ENSCVAG00000009207	sb:cb81	100	66.282	ENSLBEG00000018376	sb:cb81	100	67.667	Labrus_bergylta
ENSCVAG00000009207	sb:cb81	62	44.788	ENSLBEG00000008102	zfp36l1a	61	41.509	Labrus_bergylta
ENSCVAG00000009207	sb:cb81	90	37.990	ENSLACG00000015980	-	93	37.037	Latimeria_chalumnae
ENSCVAG00000009207	sb:cb81	100	50.356	ENSLACG00000015732	sb:cb81	100	49.764	Latimeria_chalumnae
ENSCVAG00000009207	sb:cb81	62	43.253	ENSLACG00000012879	-	68	41.869	Latimeria_chalumnae
ENSCVAG00000009207	sb:cb81	77	35.905	ENSLOCG00000014597	zgc:162730	78	36.202	Lepisosteus_oculatus
ENSCVAG00000009207	sb:cb81	100	55.059	ENSLOCG00000014587	sb:cb81	100	56.941	Lepisosteus_oculatus
ENSCVAG00000009207	sb:cb81	100	72.494	ENSMAMG00000020144	sb:cb81	90	73.193	Mastacembelus_armatus
ENSCVAG00000009207	sb:cb81	62	46.154	ENSMAMG00000000274	zfp36l1a	56	41.353	Mastacembelus_armatus
ENSCVAG00000009207	sb:cb81	71	38.650	ENSMAMG00000007511	zgc:114130	64	37.987	Mastacembelus_armatus
ENSCVAG00000009207	sb:cb81	100	74.766	ENSMZEG00005016001	-	100	75.822	Maylandia_zebra
ENSCVAG00000009207	sb:cb81	62	44.615	ENSMZEG00005014679	zfp36l1a	62	39.850	Maylandia_zebra
ENSCVAG00000009207	sb:cb81	69	40.063	ENSMZEG00005014415	zgc:162730	96	38.776	Maylandia_zebra
ENSCVAG00000009207	sb:cb81	100	75.117	ENSMZEG00005024684	sb:cb81	100	76.056	Maylandia_zebra
ENSCVAG00000009207	sb:cb81	100	57.757	ENSMMOG00000010073	sb:cb81	100	58.234	Mola_mola
ENSCVAG00000009207	sb:cb81	62	46.538	ENSMMOG00000011231	zfp36l1a	62	44.828	Mola_mola
ENSCVAG00000009207	sb:cb81	64	60.821	ENSMALG00000021140	-	96	62.548	Monopterus_albus
ENSCVAG00000009207	sb:cb81	90	37.500	ENSMALG00000021238	zfp36l1a	60	44.015	Monopterus_albus
ENSCVAG00000009207	sb:cb81	100	69.321	ENSNBRG00000006231	sb:cb81	100	71.163	Neolamprologus_brichardi
ENSCVAG00000009207	sb:cb81	62	45.000	ENSNBRG00000010827	zfp36l1a	62	40.226	Neolamprologus_brichardi
ENSCVAG00000009207	sb:cb81	100	74.299	ENSONIG00000001259	sb:cb81	100	75.701	Oreochromis_niloticus
ENSCVAG00000009207	sb:cb81	62	45.000	ENSONIG00000000973	zfp36l1a	64	40.226	Oreochromis_niloticus
ENSCVAG00000009207	sb:cb81	62	42.049	ENSONIG00000005003	zgc:162730	99	40.395	Oreochromis_niloticus
ENSCVAG00000009207	sb:cb81	62	46.743	ENSORLG00000029605	zfp36l1a	62	42.146	Oryzias_latipes
ENSCVAG00000009207	sb:cb81	100	69.305	ENSORLG00000024026	sb:cb81	86	68.585	Oryzias_latipes
ENSCVAG00000009207	sb:cb81	100	67.386	ENSORLG00020021084	sb:cb81	100	68.333	Oryzias_latipes_hni
ENSCVAG00000009207	sb:cb81	62	46.743	ENSORLG00020021609	zfp36l1a	62	42.146	Oryzias_latipes_hni
ENSCVAG00000009207	sb:cb81	62	46.743	ENSORLG00015019460	zfp36l1a	62	42.146	Oryzias_latipes_hsok
ENSCVAG00000009207	sb:cb81	100	68.345	ENSORLG00015010105	sb:cb81	100	67.146	Oryzias_latipes_hsok
ENSCVAG00000009207	sb:cb81	62	46.743	ENSOMEG00000018296	zfp36l1a	62	41.762	Oryzias_melastigma
ENSCVAG00000009207	sb:cb81	100	68.990	ENSOMEG00000020565	sb:cb81	100	67.788	Oryzias_melastigma
ENSCVAG00000009207	sb:cb81	53	46.222	ENSPKIG00000007298	ZFP36L1	62	43.629	Paramormyrops_kingsleyae
ENSCVAG00000009207	sb:cb81	62	46.565	ENSPSIG00000008151	ZFP36L1	67	42.701	Pelodiscus_sinensis
ENSCVAG00000009207	sb:cb81	63	50.562	ENSPMGG00000009232	sb:cb81	79	48.276	Periophthalmus_magnuspinnatus
ENSCVAG00000009207	sb:cb81	63	48.302	ENSPMGG00000000442	zfp36l1a	68	45.977	Periophthalmus_magnuspinnatus
ENSCVAG00000009207	sb:cb81	100	36.902	ENSPCIG00000019895	ZFP36L1	58	41.281	Phascolarctos_cinereus
ENSCVAG00000009207	sb:cb81	100	71.223	ENSPFOG00000013806	sb:cb81	100	71.942	Poecilia_formosa
ENSCVAG00000009207	sb:cb81	63	45.660	ENSPFOG00000017436	zfp36l1a	61	41.697	Poecilia_formosa
ENSCVAG00000009207	sb:cb81	81	39.058	ENSPFOG00000003665	zgc:162730	99	35.294	Poecilia_formosa
ENSCVAG00000009207	sb:cb81	63	45.660	ENSPLAG00000005641	zfp36l1a	63	41.697	Poecilia_latipinna
ENSCVAG00000009207	sb:cb81	91	70.789	ENSPLAG00000020158	sb:cb81	96	71.046	Poecilia_latipinna
ENSCVAG00000009207	sb:cb81	79	38.483	ENSPLAG00000000946	zgc:162730	88	35.459	Poecilia_latipinna
ENSCVAG00000009207	sb:cb81	100	71.223	ENSPMEG00000022425	sb:cb81	100	71.942	Poecilia_mexicana
ENSCVAG00000009207	sb:cb81	79	38.764	ENSPMEG00000000341	zgc:162730	88	35.969	Poecilia_mexicana
ENSCVAG00000009207	sb:cb81	63	45.420	ENSPMEG00000013028	zfp36l1a	61	41.697	Poecilia_mexicana
ENSCVAG00000009207	sb:cb81	79	38.764	ENSPREG00000021263	zgc:162730	88	36.693	Poecilia_reticulata
ENSCVAG00000009207	sb:cb81	100	71.190	ENSPREG00000017495	sb:cb81	100	71.905	Poecilia_reticulata
ENSCVAG00000009207	sb:cb81	63	47.727	ENSPREG00000013484	zfp36l1a	63	41.697	Poecilia_reticulata
ENSCVAG00000009207	sb:cb81	100	71.362	ENSPNYG00000007502	sb:cb81	100	72.834	Pundamilia_nyererei
ENSCVAG00000009207	sb:cb81	62	44.231	ENSPNYG00000004953	zfp36l1a	62	42.308	Pundamilia_nyererei
ENSCVAG00000009207	sb:cb81	62	46.947	ENSPNAG00000015712	zfp36l1a	62	43.678	Pygocentrus_nattereri
ENSCVAG00000009207	sb:cb81	62	47.126	ENSPNAG00000000386	zfp36l1b	64	42.435	Pygocentrus_nattereri
ENSCVAG00000009207	sb:cb81	100	54.067	ENSPNAG00000030063	sb:cb81	100	56.563	Pygocentrus_nattereri
ENSCVAG00000009207	sb:cb81	67	38.754	ENSPNAG00000023029	zgc:114130	96	36.117	Pygocentrus_nattereri
ENSCVAG00000009207	sb:cb81	62	44.015	ENSSFOG00015002575	-	61	42.336	Scleropages_formosus
ENSCVAG00000009207	sb:cb81	99	46.528	ENSSFOG00015003179	sb:cb81	99	46.189	Scleropages_formosus
ENSCVAG00000009207	sb:cb81	54	70.259	ENSSMAG00000004403	sb:cb81	94	69.828	Scophthalmus_maximus
ENSCVAG00000009207	sb:cb81	62	40.493	ENSSDUG00000001019	zfp36l1b	61	42.023	Seriola_dumerili
ENSCVAG00000009207	sb:cb81	100	73.973	ENSSDUG00000004426	sb:cb81	100	75.114	Seriola_dumerili
ENSCVAG00000009207	sb:cb81	90	37.302	ENSSDUG00000009669	zfp36l1a	62	44.444	Seriola_dumerili
ENSCVAG00000009207	sb:cb81	63	43.463	ENSSDUG00000002247	zgc:162730	99	34.192	Seriola_dumerili
ENSCVAG00000009207	sb:cb81	71	39.157	ENSSDUG00000002237	zgc:114130	62	40.767	Seriola_dumerili
ENSCVAG00000009207	sb:cb81	100	74.483	ENSSLDG00000018035	sb:cb81	100	75.632	Seriola_lalandi_dorsalis
ENSCVAG00000009207	sb:cb81	53	44.000	ENSSLDG00000021382	zfp36l1a	62	44.444	Seriola_lalandi_dorsalis
ENSCVAG00000009207	sb:cb81	63	43.110	ENSSLDG00000008502	zgc:162730	99	34.426	Seriola_lalandi_dorsalis
ENSCVAG00000009207	sb:cb81	73	40.059	ENSSLDG00000008496	zgc:114130	62	41.608	Seriola_lalandi_dorsalis
ENSCVAG00000009207	sb:cb81	86	36.591	ENSSPAG00000006851	zgc:162730	85	34.171	Stegastes_partitus
ENSCVAG00000009207	sb:cb81	73	40.673	ENSSPAG00000006856	zgc:114130	64	41.472	Stegastes_partitus
ENSCVAG00000009207	sb:cb81	100	69.575	ENSSPAG00000013546	sb:cb81	100	70.588	Stegastes_partitus
ENSCVAG00000009207	sb:cb81	62	45.000	ENSSPAG00000010371	zfp36l1a	62	40.602	Stegastes_partitus
ENSCVAG00000009207	sb:cb81	62	47.308	ENSTRUG00000022418	zfp36l1	62	45.769	Takifugu_rubripes
ENSCVAG00000009207	sb:cb81	100	64.846	ENSTRUG00000020720	sb:cb81	100	65.796	Takifugu_rubripes
ENSCVAG00000009207	sb:cb81	71	38.323	ENSTRUG00000022473	zgc:114130	62	37.838	Takifugu_rubripes
ENSCVAG00000009207	sb:cb81	79	63.253	ENSTNIG00000019802	sb:cb81	94	63.855	Tetraodon_nigroviridis
ENSCVAG00000009207	sb:cb81	98	37.441	ENSXETG00000016987	zfp36l1	86	37.403	Xenopus_tropicalis
ENSCVAG00000009207	sb:cb81	79	38.504	ENSXCOG00000012791	zgc:162730	87	36.990	Xiphophorus_couchianus
ENSCVAG00000009207	sb:cb81	63	46.792	ENSXCOG00000001799	zfp36l1a	61	41.328	Xiphophorus_couchianus
ENSCVAG00000009207	sb:cb81	70	72.549	ENSXCOG00000010688	sb:cb81	98	75.556	Xiphophorus_couchianus
ENSCVAG00000009207	sb:cb81	79	38.504	ENSXMAG00000018206	zgc:162730	87	36.990	Xiphophorus_maculatus
ENSCVAG00000009207	sb:cb81	100	73.141	ENSXMAG00000004681	sb:cb81	99	73.141	Xiphophorus_maculatus
ENSCVAG00000009207	sb:cb81	63	47.348	ENSXMAG00000022234	zfp36l1a	61	41.328	Xiphophorus_maculatus