EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7417 bases
Position: chrKL652729.1:191107-198523
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007538	HGTP_anticodon	PF03129.20	1e-15	1	1
ENSCVAP00000007538	tRNA-synt_2b	PF00587.25	2.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003127	-	1296	-	ENSCVAP00000007538	431 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000009253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009253	-	99	64.486	ENSCVAG00000009572	tarsl2	53	64.486
ENSCVAG00000009253	-	99	66.822	ENSCVAG00000012329	tars	59	66.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009253	-	98	65.802	ENSG00000185418	TARSL2	53	65.802	Homo_sapiens
ENSCVAG00000009253	-	99	78.824	ENSAPOG00000015706	-	100	78.824	Acanthochromis_polyacanthus
ENSCVAG00000009253	-	98	65.166	ENSAMEG00000003074	TARSL2	54	65.166	Ailuropoda_melanoleuca
ENSCVAG00000009253	-	99	90.588	ENSACIG00000007759	-	93	90.465	Amphilophus_citrinellus
ENSCVAG00000009253	-	99	84.112	ENSAOCG00000012359	-	99	84.112	Amphiprion_ocellaris
ENSCVAG00000009253	-	99	80.235	ENSAPEG00000007512	-	100	80.235	Amphiprion_percula
ENSCVAG00000009253	-	100	90.487	ENSATEG00000023568	-	62	90.487	Anabas_testudineus
ENSCVAG00000009253	-	98	67.062	ENSAPLG00000008485	TARSL2	59	67.062	Anas_platyrhynchos
ENSCVAG00000009253	-	97	48.349	ENSACAG00000000199	TARSL2	52	48.349	Anolis_carolinensis
ENSCVAG00000009253	-	99	62.150	ENSACAG00000003076	-	63	62.150	Anolis_carolinensis
ENSCVAG00000009253	-	98	60.613	ENSANAG00000020687	TARSL2	50	63.351	Aotus_nancymaae
ENSCVAG00000009253	-	100	90.255	ENSACLG00000020262	-	62	90.255	Astatotilapia_calliptera
ENSCVAG00000009253	-	100	80.046	ENSAMXG00000012533	-	62	80.420	Astyanax_mexicanus
ENSCVAG00000009253	-	98	62.736	ENSBTAG00000007651	TARSL2	53	62.736	Bos_taurus
ENSCVAG00000009253	-	98	66.222	ENSCJAG00000017350	TARSL2	52	66.222	Callithrix_jacchus
ENSCVAG00000009253	-	98	65.012	ENSCAFG00000010453	TARSL2	53	65.012	Canis_familiaris
ENSCVAG00000009253	-	98	64.775	ENSCAFG00020020868	TARSL2	68	64.775	Canis_lupus_dingo
ENSCVAG00000009253	-	98	63.679	ENSTSYG00000004538	TARSL2	60	63.679	Carlito_syrichta
ENSCVAG00000009253	-	98	56.840	ENSCAPG00000004815	TARSL2	63	56.840	Cavia_aperea
ENSCVAG00000009253	-	98	64.623	ENSCPOG00000008850	TARSL2	60	64.623	Cavia_porcellus
ENSCVAG00000009253	-	98	65.094	ENSCCAG00000030068	TARSL2	50	68.325	Cebus_capucinus
ENSCVAG00000009253	-	98	65.094	ENSCATG00000037383	TARSL2	54	65.094	Cercocebus_atys
ENSCVAG00000009253	-	98	64.623	ENSCLAG00000016873	TARSL2	55	64.623	Chinchilla_lanigera
ENSCVAG00000009253	-	98	65.094	ENSCSAG00000016828	TARSL2	53	65.094	Chlorocebus_sabaeus
ENSCVAG00000009253	-	88	67.277	ENSCHOG00000001319	TARSL2	59	67.277	Choloepus_hoffmanni
ENSCVAG00000009253	-	98	66.038	ENSCPBG00000010792	TARSL2	53	66.038	Chrysemys_picta_bellii
ENSCVAG00000009253	-	98	65.330	ENSCANG00000035438	TARSL2	59	65.330	Colobus_angolensis_palliatus
ENSCVAG00000009253	-	98	64.623	ENSCGRG00001020827	Tarsl2	53	64.623	Cricetulus_griseus_chok1gshd
ENSCVAG00000009253	-	98	64.623	ENSCGRG00000011398	Tarsl2	59	64.623	Cricetulus_griseus_crigri
ENSCVAG00000009253	-	100	86.311	ENSCSEG00000002562	-	99	84.977	Cynoglossus_semilaevis
ENSCVAG00000009253	-	98	78.014	ENSDARG00000075385	LO017852.1	99	78.014	Danio_rerio
ENSCVAG00000009253	-	98	61.557	ENSDNOG00000046161	TARSL2	61	61.557	Dasypus_novemcinctus
ENSCVAG00000009253	-	99	64.419	ENSDORG00000009653	Tarsl2	61	64.419	Dipodomys_ordii
ENSCVAG00000009253	-	98	64.623	ENSEASG00005017718	TARSL2	53	64.623	Equus_asinus_asinus
ENSCVAG00000009253	-	98	64.623	ENSECAG00000024315	TARSL2	53	64.623	Equus_caballus
ENSCVAG00000009253	-	98	64.623	ENSEEUG00000014117	TARSL2	69	64.623	Erinaceus_europaeus
ENSCVAG00000009253	-	100	82.831	ENSELUG00000013552	-	62	82.831	Esox_lucius
ENSCVAG00000009253	-	98	64.858	ENSFCAG00000008836	TARSL2	50	67.801	Felis_catus
ENSCVAG00000009253	-	98	67.376	ENSFALG00000012444	TARSL2	58	66.589	Ficedula_albicollis
ENSCVAG00000009253	-	98	63.915	ENSFDAG00000002767	TARSL2	64	63.915	Fukomys_damarensis
ENSCVAG00000009253	-	100	93.735	ENSFHEG00000021877	-	79	93.735	Fundulus_heteroclitus
ENSCVAG00000009253	-	100	84.687	ENSGMOG00000006184	-	62	84.687	Gadus_morhua
ENSCVAG00000009253	-	98	66.430	ENSGALG00000003985	TARSL2	55	65.661	Gallus_gallus
ENSCVAG00000009253	-	99	61.593	ENSGALG00000043416	-	92	63.409	Gallus_gallus
ENSCVAG00000009253	-	100	94.200	ENSGAFG00000012691	-	62	94.200	Gambusia_affinis
ENSCVAG00000009253	-	100	88.631	ENSGACG00000011734	-	63	88.631	Gasterosteus_aculeatus
ENSCVAG00000009253	-	98	65.802	ENSGAGG00000010775	TARSL2	53	65.802	Gopherus_agassizii
ENSCVAG00000009253	-	98	65.566	ENSGGOG00000007839	TARSL2	55	65.566	Gorilla_gorilla
ENSCVAG00000009253	-	100	90.719	ENSHBUG00000003411	-	63	90.719	Haplochromis_burtoni
ENSCVAG00000009253	-	98	64.387	ENSHGLG00000011618	TARSL2	54	64.387	Heterocephalus_glaber_female
ENSCVAG00000009253	-	98	64.387	ENSHGLG00100016769	TARSL2	60	64.387	Heterocephalus_glaber_male
ENSCVAG00000009253	-	99	84.149	ENSHCOG00000014119	-	61	84.149	Hippocampus_comes
ENSCVAG00000009253	-	99	73.412	ENSIPUG00000000099	-	100	73.412	Ictalurus_punctatus
ENSCVAG00000009253	-	98	64.858	ENSSTOG00000032725	TARSL2	53	64.858	Ictidomys_tridecemlineatus
ENSCVAG00000009253	-	100	89.327	ENSKMAG00000001354	-	62	89.327	Kryptolebias_marmoratus
ENSCVAG00000009253	-	99	85.882	ENSLBEG00000026238	-	100	85.882	Labrus_bergylta
ENSCVAG00000009253	-	98	64.623	ENSLAFG00000011941	TARSL2	62	64.623	Loxodonta_africana
ENSCVAG00000009253	-	98	64.858	ENSMFAG00000001902	TARSL2	53	64.858	Macaca_fascicularis
ENSCVAG00000009253	-	98	65.094	ENSMMUG00000000278	TARSL2	53	65.094	Macaca_mulatta
ENSCVAG00000009253	-	98	64.858	ENSMNEG00000034952	TARSL2	53	64.858	Macaca_nemestrina
ENSCVAG00000009253	-	98	65.330	ENSMLEG00000035535	TARSL2	60	65.330	Mandrillus_leucophaeus
ENSCVAG00000009253	-	100	90.023	ENSMAMG00000015032	-	62	90.023	Mastacembelus_armatus
ENSCVAG00000009253	-	100	90.255	ENSMZEG00005015989	-	62	90.255	Maylandia_zebra
ENSCVAG00000009253	-	84	68.617	ENSMGAG00000004951	TARSL2	58	68.617	Meleagris_gallopavo
ENSCVAG00000009253	-	87	61.155	ENSMAUG00000015756	Tarsl2	54	61.155	Mesocricetus_auratus
ENSCVAG00000009253	-	98	64.858	ENSMICG00000013039	TARSL2	61	64.858	Microcebus_murinus
ENSCVAG00000009253	-	98	65.330	ENSMOCG00000014909	Tarsl2	54	65.330	Microtus_ochrogaster
ENSCVAG00000009253	-	100	86.775	ENSMMOG00000016135	-	98	86.775	Mola_mola
ENSCVAG00000009253	-	98	64.623	ENSMODG00000011941	TARSL2	53	64.623	Monodelphis_domestica
ENSCVAG00000009253	-	100	88.167	ENSMALG00000007340	-	61	88.167	Monopterus_albus
ENSCVAG00000009253	-	98	64.623	MGP_CAROLIEiJ_G0029834	Tarsl2	54	64.623	Mus_caroli
ENSCVAG00000009253	-	98	64.387	ENSMUSG00000030515	Tarsl2	54	64.387	Mus_musculus
ENSCVAG00000009253	-	98	64.623	MGP_PahariEiJ_G0013059	Tarsl2	54	64.623	Mus_pahari
ENSCVAG00000009253	-	98	65.566	ENSMPUG00000011032	TARSL2	54	65.566	Mustela_putorius_furo
ENSCVAG00000009253	-	98	63.294	ENSMLUG00000012870	-	53	63.294	Myotis_lucifugus
ENSCVAG00000009253	-	74	68.847	ENSMLUG00000024482	-	54	68.847	Myotis_lucifugus
ENSCVAG00000009253	-	98	64.858	ENSNGAG00000020451	Tarsl2	53	64.858	Nannospalax_galili
ENSCVAG00000009253	-	100	90.487	ENSNBRG00000003429	-	63	90.487	Neolamprologus_brichardi
ENSCVAG00000009253	-	99	64.884	ENSNLEG00000000541	TARSL2	54	64.884	Nomascus_leucogenys
ENSCVAG00000009253	-	98	58.255	ENSMEUG00000002935	TARSL2	53	58.255	Notamacropus_eugenii
ENSCVAG00000009253	-	99	42.459	ENSOPRG00000002689	-	53	42.459	Ochotona_princeps
ENSCVAG00000009253	-	98	64.623	ENSODEG00000014454	TARSL2	53	64.623	Octodon_degus
ENSCVAG00000009253	-	100	90.046	ENSONIG00000006402	-	65	90.046	Oreochromis_niloticus
ENSCVAG00000009253	-	98	64.455	ENSOANG00000013263	TARSL2	63	64.455	Ornithorhynchus_anatinus
ENSCVAG00000009253	-	98	64.151	ENSOCUG00000010740	TARSL2	59	64.151	Oryctolagus_cuniculus
ENSCVAG00000009253	-	99	89.019	ENSORLG00000010391	-	61	89.019	Oryzias_latipes
ENSCVAG00000009253	-	99	89.252	ENSORLG00020008928	-	62	89.252	Oryzias_latipes_hni
ENSCVAG00000009253	-	99	89.019	ENSORLG00015014897	-	62	89.019	Oryzias_latipes_hsok
ENSCVAG00000009253	-	99	89.953	ENSOMEG00000009022	-	62	89.953	Oryzias_melastigma
ENSCVAG00000009253	-	98	63.679	ENSOGAG00000014311	TARSL2	53	63.679	Otolemur_garnettii
ENSCVAG00000009253	-	98	62.972	ENSOARG00000016573	TARSL2	60	62.972	Ovis_aries
ENSCVAG00000009253	-	98	65.330	ENSPPAG00000040066	TARSL2	61	65.330	Pan_paniscus
ENSCVAG00000009253	-	98	64.623	ENSPPRG00000017275	TARSL2	51	67.539	Panthera_pardus
ENSCVAG00000009253	-	98	64.623	ENSPTIG00000015184	TARSL2	53	64.623	Panthera_tigris_altaica
ENSCVAG00000009253	-	98	65.566	ENSPTRG00000007516	TARSL2	53	65.566	Pan_troglodytes
ENSCVAG00000009253	-	98	61.839	ENSPANG00000022401	TARSL2	51	64.377	Papio_anubis
ENSCVAG00000009253	-	99	76.279	ENSPKIG00000010658	-	99	75.529	Paramormyrops_kingsleyae
ENSCVAG00000009253	-	98	65.566	ENSPSIG00000008419	TARSL2	73	65.566	Pelodiscus_sinensis
ENSCVAG00000009253	-	100	85.151	ENSPMGG00000007785	-	99	85.151	Periophthalmus_magnuspinnatus
ENSCVAG00000009253	-	98	64.858	ENSPEMG00000019852	Tarsl2	57	64.858	Peromyscus_maniculatus_bairdii
ENSCVAG00000009253	-	98	64.858	ENSPCIG00000022481	TARSL2	53	64.858	Phascolarctos_cinereus
ENSCVAG00000009253	-	99	94.200	ENSPFOG00000013444	-	65	94.200	Poecilia_formosa
ENSCVAG00000009253	-	99	93.953	ENSPLAG00000018145	-	62	93.953	Poecilia_latipinna
ENSCVAG00000009253	-	99	94.419	ENSPMEG00000023625	-	62	94.419	Poecilia_mexicana
ENSCVAG00000009253	-	99	92.235	ENSPREG00000017312	-	100	92.235	Poecilia_reticulata
ENSCVAG00000009253	-	98	65.566	ENSPPYG00000006830	TARSL2	60	65.566	Pongo_abelii
ENSCVAG00000009253	-	99	58.411	ENSPCAG00000011132	TARSL2	53	58.411	Procavia_capensis
ENSCVAG00000009253	-	88	62.041	ENSPCOG00000026095	TARSL2	50	62.041	Propithecus_coquereli
ENSCVAG00000009253	-	100	90.487	ENSPNYG00000004232	-	62	90.487	Pundamilia_nyererei
ENSCVAG00000009253	-	99	81.163	ENSPNAG00000002308	-	62	81.163	Pygocentrus_nattereri
ENSCVAG00000009253	-	98	65.094	ENSRBIG00000035707	TARSL2	54	65.094	Rhinopithecus_bieti
ENSCVAG00000009253	-	98	65.094	ENSRROG00000029492	TARSL2	59	65.094	Rhinopithecus_roxellana
ENSCVAG00000009253	-	98	64.858	ENSSBOG00000029807	TARSL2	61	64.858	Saimiri_boliviensis_boliviensis
ENSCVAG00000009253	-	98	65.330	ENSSHAG00000010266	TARSL2	56	65.330	Sarcophilus_harrisii
ENSCVAG00000009253	-	99	77.804	ENSSFOG00015022086	tars2	88	75.482	Scleropages_formosus
ENSCVAG00000009253	-	100	88.167	ENSSMAG00000015682	-	63	88.167	Scophthalmus_maximus
ENSCVAG00000009253	-	99	89.486	ENSSDUG00000007180	-	99	89.486	Seriola_dumerili
ENSCVAG00000009253	-	99	90.376	ENSSLDG00000015367	-	99	90.376	Seriola_lalandi_dorsalis
ENSCVAG00000009253	-	94	67.407	ENSSPUG00000001523	TARSL2	98	65.094	Sphenodon_punctatus
ENSCVAG00000009253	-	99	86.744	ENSSPAG00000018887	-	63	86.744	Stegastes_partitus
ENSCVAG00000009253	-	98	62.028	ENSSSCG00000005781	TARSL2	63	62.028	Sus_scrofa
ENSCVAG00000009253	-	98	58.962	ENSTGUG00000004602	-	98	58.962	Taeniopygia_guttata
ENSCVAG00000009253	-	99	66.200	ENSTGUG00000005726	TARSL2	64	66.200	Taeniopygia_guttata
ENSCVAG00000009253	-	99	88.263	ENSTRUG00000015004	-	99	88.263	Takifugu_rubripes
ENSCVAG00000009253	-	97	83.721	ENSTNIG00000008060	-	58	86.732	Tetraodon_nigroviridis
ENSCVAG00000009253	-	82	59.155	ENSTBEG00000001134	-	52	59.155	Tupaia_belangeri
ENSCVAG00000009253	-	98	62.736	ENSTTRG00000016207	TARSL2	60	62.736	Tursiops_truncatus
ENSCVAG00000009253	-	98	65.094	ENSUMAG00000024371	TARSL2	75	65.094	Ursus_maritimus
ENSCVAG00000009253	-	98	65.012	ENSVVUG00000014742	TARSL2	61	65.012	Vulpes_vulpes
ENSCVAG00000009253	-	100	94.200	ENSXCOG00000019508	-	93	94.000	Xiphophorus_couchianus
ENSCVAG00000009253	-	100	94.664	ENSXMAG00000016382	-	62	94.664	Xiphophorus_maculatus