EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009259 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1824 bases
Position: chrKL652502.1:2824467-2826290
Accession: 107082091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007592	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003053	-	1056	XM_015370558	ENSCVAP00000007592	351 (aa)	XP_015226044	-

Gene Model

Click here to download ENSCVAG00000009259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009259	-	99	36.574	ENSCVAG00000011047	rbm12b	97	36.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009259	-	99	33.190	ENSG00000183808	RBM12B	99	51.852	Homo_sapiens
ENSCVAG00000009259	-	96	60.326	ENSAPOG00000008836	zgc:153215	95	60.326	Acanthochromis_polyacanthus
ENSCVAG00000009259	-	98	32.759	ENSAMEG00000007134	RBM12B	57	32.759	Ailuropoda_melanoleuca
ENSCVAG00000009259	-	72	42.246	ENSACIG00000014943	rbm12b	71	38.647	Amphilophus_citrinellus
ENSCVAG00000009259	-	98	44.643	ENSACIG00000013317	zgc:153215	99	44.643	Amphilophus_citrinellus
ENSCVAG00000009259	-	99	49.545	ENSAOCG00000010819	zgc:153215	99	52.036	Amphiprion_ocellaris
ENSCVAG00000009259	-	52	35.096	ENSAPEG00000022079	rbm12b	71	35.096	Amphiprion_percula
ENSCVAG00000009259	-	99	67.073	ENSATEG00000001886	zgc:153215	80	58.491	Anabas_testudineus
ENSCVAG00000009259	-	99	37.264	ENSATEG00000004578	rbm12b	73	37.264	Anabas_testudineus
ENSCVAG00000009259	-	99	33.036	ENSANAG00000034015	RBM12B	57	32.328	Aotus_nancymaae
ENSCVAG00000009259	-	99	35.780	ENSACLG00000005575	rbm12b	72	35.780	Astatotilapia_calliptera
ENSCVAG00000009259	-	99	45.041	ENSACLG00000007675	zgc:153215	99	45.041	Astatotilapia_calliptera
ENSCVAG00000009259	-	94	50.000	ENSAMXG00000020853	zgc:153215	73	50.000	Astyanax_mexicanus
ENSCVAG00000009259	-	99	34.052	ENSBTAG00000013408	RBM12B	56	34.052	Bos_taurus
ENSCVAG00000009259	-	99	32.759	ENSCAFG00020012203	RBM12B	55	33.190	Canis_lupus_dingo
ENSCVAG00000009259	-	99	34.052	ENSCHIG00000006790	RBM12B	67	34.052	Capra_hircus
ENSCVAG00000009259	-	98	33.333	ENSCAPG00000003543	RBM12B	51	33.333	Cavia_aperea
ENSCVAG00000009259	-	98	33.333	ENSCPOG00000007815	RBM12B	51	33.333	Cavia_porcellus
ENSCVAG00000009259	-	99	32.759	ENSCATG00000030769	RBM12B	56	32.759	Cercocebus_atys
ENSCVAG00000009259	-	99	32.328	ENSCLAG00000017617	RBM12B	51	32.328	Chinchilla_lanigera
ENSCVAG00000009259	-	98	31.034	ENSCHOG00000008934	RBM12B	51	31.034	Choloepus_hoffmanni
ENSCVAG00000009259	-	99	32.759	ENSCANG00000030379	RBM12B	56	32.759	Colobus_angolensis_palliatus
ENSCVAG00000009259	-	99	33.766	ENSCGRG00001008710	-	56	34.335	Cricetulus_griseus_chok1gshd
ENSCVAG00000009259	-	99	40.553	ENSCSEG00000004610	rbm12b	69	40.553	Cynoglossus_semilaevis
ENSCVAG00000009259	-	99	36.464	ENSCSEG00000001575	-	99	36.464	Cynoglossus_semilaevis
ENSCVAG00000009259	-	94	51.579	ENSDARG00000055889	zgc:153215	82	51.579	Danio_rerio
ENSCVAG00000009259	-	99	33.190	ENSDORG00000024034	-	51	33.190	Dipodomys_ordii
ENSCVAG00000009259	-	99	32.143	ENSETEG00000013005	-	65	32.143	Echinops_telfairi
ENSCVAG00000009259	-	99	32.759	ENSEASG00005016297	RBM12B	55	32.759	Equus_asinus_asinus
ENSCVAG00000009259	-	100	31.461	ENSELUG00000009039	zgc:153215	97	30.787	Esox_lucius
ENSCVAG00000009259	-	99	32.759	ENSFCAG00000029274	RBM12B	56	32.759	Felis_catus
ENSCVAG00000009259	-	71	43.284	ENSFALG00000014893	RBM12B	66	43.284	Ficedula_albicollis
ENSCVAG00000009259	-	99	32.328	ENSFDAG00000005576	RBM12B	50	32.328	Fukomys_damarensis
ENSCVAG00000009259	-	97	59.278	ENSFHEG00000014539	zgc:153215	96	59.278	Fundulus_heteroclitus
ENSCVAG00000009259	-	99	35.484	ENSFHEG00000016425	rbm12b	92	35.616	Fundulus_heteroclitus
ENSCVAG00000009259	-	100	46.269	ENSGALG00000035129	RBM12B	66	46.269	Gallus_gallus
ENSCVAG00000009259	-	97	52.778	ENSGAFG00000007845	zgc:153215	98	52.778	Gambusia_affinis
ENSCVAG00000009259	-	99	32.328	ENSGGOG00000011909	RBM12B	55	32.328	Gorilla_gorilla
ENSCVAG00000009259	-	99	63.218	ENSHBUG00000016150	zgc:153215	85	63.218	Haplochromis_burtoni
ENSCVAG00000009259	-	99	34.862	ENSHBUG00000016227	rbm12b	72	34.862	Haplochromis_burtoni
ENSCVAG00000009259	-	99	32.328	ENSHGLG00000009063	RBM12B	50	32.328	Heterocephalus_glaber_female
ENSCVAG00000009259	-	99	32.328	ENSHGLG00100021324	RBM12B	50	32.328	Heterocephalus_glaber_male
ENSCVAG00000009259	-	99	41.791	ENSIPUG00000001167	RBM12B	64	41.791	Ictalurus_punctatus
ENSCVAG00000009259	-	95	45.918	ENSIPUG00000019731	zgc:153215	69	45.918	Ictalurus_punctatus
ENSCVAG00000009259	-	99	33.190	ENSSTOG00000027445	RBM12B	58	33.190	Ictidomys_tridecemlineatus
ENSCVAG00000009259	-	99	32.900	ENSJJAG00000004165	-	56	32.900	Jaculus_jaculus
ENSCVAG00000009259	-	99	46.014	ENSKMAG00000004958	zgc:153215	99	41.986	Kryptolebias_marmoratus
ENSCVAG00000009259	-	99	53.456	ENSLBEG00000002597	zgc:153215	99	56.481	Labrus_bergylta
ENSCVAG00000009259	-	98	33.906	ENSLOCG00000018344	rbm12b	100	33.906	Lepisosteus_oculatus
ENSCVAG00000009259	-	99	34.632	ENSLAFG00000029949	RBM12B	57	35.242	Loxodonta_africana
ENSCVAG00000009259	-	99	32.759	ENSMFAG00000045430	RBM12B	56	32.759	Macaca_fascicularis
ENSCVAG00000009259	-	99	51.190	ENSMMUG00000005558	RBM12B	55	32.759	Macaca_mulatta
ENSCVAG00000009259	-	99	32.759	ENSMNEG00000041292	RBM12B	56	32.759	Macaca_nemestrina
ENSCVAG00000009259	-	99	32.328	ENSMLEG00000037288	RBM12B	55	32.328	Mandrillus_leucophaeus
ENSCVAG00000009259	-	100	47.753	ENSMAMG00000012038	zgc:153215	96	47.753	Mastacembelus_armatus
ENSCVAG00000009259	-	99	38.756	ENSMAMG00000011998	rbm12b	74	38.756	Mastacembelus_armatus
ENSCVAG00000009259	-	99	35.945	ENSMZEG00005015005	rbm12b	74	35.945	Maylandia_zebra
ENSCVAG00000009259	-	99	63.218	ENSMZEG00005005435	zgc:153215	85	63.218	Maylandia_zebra
ENSCVAG00000009259	-	99	34.335	ENSMAUG00000021752	-	58	34.335	Mesocricetus_auratus
ENSCVAG00000009259	-	99	32.328	ENSMICG00000036969	RBM12B	57	32.328	Microcebus_murinus
ENSCVAG00000009259	-	99	33.766	ENSMOCG00000005603	-	58	33.906	Microtus_ochrogaster
ENSCVAG00000009259	-	99	43.127	ENSMMOG00000003372	zgc:153215	99	43.396	Mola_mola
ENSCVAG00000009259	-	99	32.787	ENSMODG00000007436	RBM12B	65	33.607	Monodelphis_domestica
ENSCVAG00000009259	-	99	36.607	ENSMALG00000012059	rbm12b	73	36.607	Monopterus_albus
ENSCVAG00000009259	-	100	51.931	ENSMALG00000001222	zgc:153215	99	51.931	Monopterus_albus
ENSCVAG00000009259	-	99	46.377	ENSMUSG00000052137	Rbm12b2	52	46.377	Mus_musculus
ENSCVAG00000009259	-	99	46.377	ENSMUSG00000046667	Rbm12b1	52	46.377	Mus_musculus
ENSCVAG00000009259	-	99	46.377	MGP_SPRETEiJ_G0026766	-	52	46.377	Mus_spretus
ENSCVAG00000009259	-	99	33.047	ENSNGAG00000002801	-	52	33.047	Nannospalax_galili
ENSCVAG00000009259	-	99	36.406	ENSNBRG00000015057	rbm12b	74	36.406	Neolamprologus_brichardi
ENSCVAG00000009259	-	99	62.069	ENSNBRG00000013644	zgc:153215	85	62.069	Neolamprologus_brichardi
ENSCVAG00000009259	-	99	32.759	ENSNLEG00000032050	RBM12B	55	32.759	Nomascus_leucogenys
ENSCVAG00000009259	-	99	32.328	ENSODEG00000019204	RBM12B	51	32.328	Octodon_degus
ENSCVAG00000009259	-	99	66.667	ENSONIG00000006054	zgc:153215	87	66.667	Oreochromis_niloticus
ENSCVAG00000009259	-	99	36.232	ENSONIG00000020612	rbm12b	62	36.232	Oreochromis_niloticus
ENSCVAG00000009259	-	98	51.190	ENSOANG00000015735	-	58	51.190	Ornithorhynchus_anatinus
ENSCVAG00000009259	-	99	31.466	ENSOCUG00000010353	RBM12B	56	31.466	Oryctolagus_cuniculus
ENSCVAG00000009259	-	99	40.099	ENSORLG00000008228	rbm12b	95	40.099	Oryzias_latipes
ENSCVAG00000009259	-	99	40.099	ENSORLG00020013619	rbm12b	95	40.099	Oryzias_latipes_hni
ENSCVAG00000009259	-	99	40.099	ENSORLG00015019999	rbm12b	95	40.099	Oryzias_latipes_hsok
ENSCVAG00000009259	-	99	42.927	ENSOMEG00000004220	zgc:153215	96	42.927	Oryzias_melastigma
ENSCVAG00000009259	-	99	36.058	ENSOMEG00000022523	rbm12b	71	36.058	Oryzias_melastigma
ENSCVAG00000009259	-	99	33.190	ENSPTIG00000020071	RBM12B	56	33.190	Panthera_tigris_altaica
ENSCVAG00000009259	-	99	33.929	ENSPTRG00000020420	RBM12B	55	33.929	Pan_troglodytes
ENSCVAG00000009259	-	99	32.759	ENSPANG00000035535	RBM12B	55	32.759	Papio_anubis
ENSCVAG00000009259	-	95	39.113	ENSPKIG00000014851	zgc:153215	81	39.113	Paramormyrops_kingsleyae
ENSCVAG00000009259	-	52	36.150	ENSPMGG00000012348	-	65	36.916	Periophthalmus_magnuspinnatus
ENSCVAG00000009259	-	99	33.333	ENSPEMG00000008279	-	57	33.333	Peromyscus_maniculatus_bairdii
ENSCVAG00000009259	-	99	33.197	ENSPCIG00000008556	RBM12B	67	34.016	Phascolarctos_cinereus
ENSCVAG00000009259	-	100	64.894	ENSPFOG00000017451	zgc:153215	73	64.894	Poecilia_formosa
ENSCVAG00000009259	-	99	37.727	ENSPFOG00000020937	rbm12b	97	38.462	Poecilia_formosa
ENSCVAG00000009259	-	99	37.727	ENSPLAG00000018782	rbm12b	100	38.462	Poecilia_latipinna
ENSCVAG00000009259	-	100	59.223	ENSPLAG00000000232	zgc:153215	99	59.223	Poecilia_latipinna
ENSCVAG00000009259	-	99	37.727	ENSPMEG00000011418	rbm12b	100	37.557	Poecilia_mexicana
ENSCVAG00000009259	-	100	60.804	ENSPMEG00000016662	zgc:153215	99	60.804	Poecilia_mexicana
ENSCVAG00000009259	-	100	53.689	ENSPREG00000018608	zgc:153215	99	53.689	Poecilia_reticulata
ENSCVAG00000009259	-	99	38.009	ENSPREG00000020770	rbm12b	100	37.557	Poecilia_reticulata
ENSCVAG00000009259	-	99	32.328	ENSPCOG00000023546	RBM12B	55	32.328	Propithecus_coquereli
ENSCVAG00000009259	-	99	32.900	ENSPVAG00000011803	RBM12B	52	32.900	Pteropus_vampyrus
ENSCVAG00000009259	-	100	46.667	ENSPNYG00000018125	zgc:153215	97	46.667	Pundamilia_nyererei
ENSCVAG00000009259	-	99	35.945	ENSPNYG00000016696	rbm12b	74	35.945	Pundamilia_nyererei
ENSCVAG00000009259	-	93	53.933	ENSPNAG00000025628	zgc:153215	77	53.933	Pygocentrus_nattereri
ENSCVAG00000009259	-	99	32.759	ENSRBIG00000035046	RBM12B	63	32.759	Rhinopithecus_bieti
ENSCVAG00000009259	-	99	32.759	ENSRROG00000023660	RBM12B	58	32.759	Rhinopithecus_roxellana
ENSCVAG00000009259	-	99	32.328	ENSSBOG00000027592	RBM12B	55	32.328	Saimiri_boliviensis_boliviensis
ENSCVAG00000009259	-	99	33.197	ENSSHAG00000015335	RBM12B	67	34.016	Sarcophilus_harrisii
ENSCVAG00000009259	-	99	30.326	ENSSFOG00015009427	zgc:153215	99	30.326	Scleropages_formosus
ENSCVAG00000009259	-	99	33.333	ENSSFOG00015001584	rbm12b	74	33.333	Scleropages_formosus
ENSCVAG00000009259	-	99	52.657	ENSSMAG00000019013	zgc:153215	96	52.657	Scophthalmus_maximus
ENSCVAG00000009259	-	99	51.869	ENSSDUG00000012545	zgc:153215	98	53.738	Seriola_dumerili
ENSCVAG00000009259	-	100	36.232	ENSSDUG00000006856	rbm12b	97	36.232	Seriola_dumerili
ENSCVAG00000009259	-	100	36.232	ENSSLDG00000016156	rbm12b	97	36.232	Seriola_lalandi_dorsalis
ENSCVAG00000009259	-	99	67.901	ENSSLDG00000013581	zgc:153215	84	61.111	Seriola_lalandi_dorsalis
ENSCVAG00000009259	-	99	34.199	ENSSARG00000011845	-	66	34.199	Sorex_araneus
ENSCVAG00000009259	-	99	47.917	ENSSPUG00000016954	RBM12B	75	47.917	Sphenodon_punctatus
ENSCVAG00000009259	-	99	46.988	ENSSPAG00000023584	zgc:153215	98	47.470	Stegastes_partitus
ENSCVAG00000009259	-	99	33.482	ENSSSCG00000006110	RBM12B	56	33.482	Sus_scrofa
ENSCVAG00000009259	-	100	44.776	ENSTGUG00000011860	RBM12B	86	44.776	Taeniopygia_guttata
ENSCVAG00000009259	-	71	44.304	ENSTNIG00000018374	-	99	44.304	Tetraodon_nigroviridis
ENSCVAG00000009259	-	99	32.328	ENSTBEG00000000449	RBM12B	62	32.328	Tupaia_belangeri
ENSCVAG00000009259	-	98	33.190	ENSUAMG00000023639	RBM12B	54	33.190	Ursus_americanus
ENSCVAG00000009259	-	98	33.190	ENSUMAG00000016008	RBM12B	52	33.190	Ursus_maritimus
ENSCVAG00000009259	-	99	32.759	ENSVVUG00000002694	RBM12B	55	32.759	Vulpes_vulpes
ENSCVAG00000009259	-	99	45.714	ENSXETG00000014694	rbm12b	88	45.714	Xenopus_tropicalis
ENSCVAG00000009259	-	99	37.634	ENSXETG00000014696	rbm12b	67	37.634	Xenopus_tropicalis
ENSCVAG00000009259	-	99	52.610	ENSXCOG00000019654	zgc:153215	98	52.610	Xiphophorus_couchianus
ENSCVAG00000009259	-	58	36.638	ENSXCOG00000019735	-	79	36.752	Xiphophorus_couchianus
ENSCVAG00000009259	-	99	38.073	ENSXMAG00000014213	rbm12b	100	38.182	Xiphophorus_maculatus
ENSCVAG00000009259	-	99	46.867	ENSXMAG00000013169	-	97	46.867	Xiphophorus_maculatus