EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000009318 (Gene tree)
Gene ID: 107088776
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12856 bases
Position: chrKL652729.1:142220-155075
Accession: 107088776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024908	PRP3	PF08572.10	6.2e-78	1	1
ENSCVAP00000024908	PWI	PF01480.17	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002996	-	2952	XM_015381152	ENSCVAP00000024908	695 (aa)	XP_015236638	UPI0007427D85

Gene Model

Click here to download ENSCVAG00000009318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009318	prpf3	99	72.340	ENSG00000117360	PRPF3	100	72.624	Homo_sapiens
ENSCVAG00000009318	prpf3	100	89.127	ENSAPOG00000015584	prpf3	100	89.413	Acanthochromis_polyacanthus
ENSCVAG00000009318	prpf3	99	72.482	ENSAMEG00000001630	PRPF3	100	72.766	Ailuropoda_melanoleuca
ENSCVAG00000009318	prpf3	100	86.932	ENSACIG00000007876	prpf3	100	86.932	Amphilophus_citrinellus
ENSCVAG00000009318	prpf3	100	89.112	ENSAOCG00000011449	prpf3	100	89.429	Amphiprion_ocellaris
ENSCVAG00000009318	prpf3	100	88.825	ENSATEG00000023583	prpf3	100	88.825	Anabas_testudineus
ENSCVAG00000009318	prpf3	99	73.475	ENSAPLG00000002440	PRPF3	100	73.333	Anas_platyrhynchos
ENSCVAG00000009318	prpf3	99	71.897	ENSACAG00000003176	PRPF3	100	72.316	Anolis_carolinensis
ENSCVAG00000009318	prpf3	99	72.340	ENSANAG00000026138	PRPF3	100	72.624	Aotus_nancymaae
ENSCVAG00000009318	prpf3	100	87.338	ENSACLG00000020127	prpf3	100	87.338	Astatotilapia_calliptera
ENSCVAG00000009318	prpf3	100	81.066	ENSAMXG00000007306	prpf3	100	80.505	Astyanax_mexicanus
ENSCVAG00000009318	prpf3	99	72.340	ENSBTAG00000013946	PRPF3	100	72.624	Bos_taurus
ENSCVAG00000009318	prpf3	81	40.351	WBGene00010844	prp-3	96	36.538	Caenorhabditis_elegans
ENSCVAG00000009318	prpf3	99	72.340	ENSCJAG00000009926	PRPF3	100	72.624	Callithrix_jacchus
ENSCVAG00000009318	prpf3	99	72.340	ENSCAFG00000011820	PRPF3	100	72.624	Canis_familiaris
ENSCVAG00000009318	prpf3	81	71.705	ENSCAFG00020019653	PRPF3	100	72.232	Canis_lupus_dingo
ENSCVAG00000009318	prpf3	99	72.340	ENSCHIG00000015434	PRPF3	100	72.624	Capra_hircus
ENSCVAG00000009318	prpf3	99	72.857	ENSTSYG00000001383	PRPF3	100	72.766	Carlito_syrichta
ENSCVAG00000009318	prpf3	93	63.441	ENSCAPG00000017812	PRPF3	95	63.441	Cavia_aperea
ENSCVAG00000009318	prpf3	99	72.340	ENSCPOG00000008068	PRPF3	100	72.624	Cavia_porcellus
ENSCVAG00000009318	prpf3	99	72.340	ENSCCAG00000026380	PRPF3	100	72.624	Cebus_capucinus
ENSCVAG00000009318	prpf3	99	59.718	ENSCATG00000041778	PRPF3	100	60.000	Cercocebus_atys
ENSCVAG00000009318	prpf3	99	72.482	ENSCLAG00000015009	PRPF3	100	72.766	Chinchilla_lanigera
ENSCVAG00000009318	prpf3	76	82.482	ENSCHOG00000011645	PRPF3	76	82.117	Choloepus_hoffmanni
ENSCVAG00000009318	prpf3	99	72.908	ENSCPBG00000008216	PRPF3	100	73.333	Chrysemys_picta_bellii
ENSCVAG00000009318	prpf3	59	59.135	ENSCING00000003312	-	99	58.894	Ciona_intestinalis
ENSCVAG00000009318	prpf3	82	53.541	ENSCSAVG00000008720	-	97	53.713	Ciona_savignyi
ENSCVAG00000009318	prpf3	99	71.773	ENSCANG00000036769	PRPF3	100	72.057	Colobus_angolensis_palliatus
ENSCVAG00000009318	prpf3	99	72.340	ENSCGRG00001019100	Prpf3	100	72.624	Cricetulus_griseus_chok1gshd
ENSCVAG00000009318	prpf3	99	72.340	ENSCGRG00000007322	Prpf3	100	72.624	Cricetulus_griseus_crigri
ENSCVAG00000009318	prpf3	100	83.994	ENSCSEG00000002532	prpf3	100	84.419	Cynoglossus_semilaevis
ENSCVAG00000009318	prpf3	100	80.398	ENSDARG00000086425	prpf3	100	80.398	Danio_rerio
ENSCVAG00000009318	prpf3	99	67.382	ENSDNOG00000005904	PRPF3	100	68.608	Dasypus_novemcinctus
ENSCVAG00000009318	prpf3	93	72.256	ENSDORG00000008664	Prpf3	100	72.561	Dipodomys_ordii
ENSCVAG00000009318	prpf3	80	53.451	FBgn0036915	Prp3	99	53.610	Drosophila_melanogaster
ENSCVAG00000009318	prpf3	99	72.340	ENSETEG00000019124	PRPF3	100	72.766	Echinops_telfairi
ENSCVAG00000009318	prpf3	100	60.530	ENSEBUG00000011680	prpf3	100	60.823	Eptatretus_burgeri
ENSCVAG00000009318	prpf3	99	72.199	ENSEASG00005001566	PRPF3	100	72.482	Equus_asinus_asinus
ENSCVAG00000009318	prpf3	99	72.340	ENSECAG00000019840	PRPF3	100	72.624	Equus_caballus
ENSCVAG00000009318	prpf3	84	72.789	ENSEEUG00000007338	PRPF3	85	72.562	Erinaceus_europaeus
ENSCVAG00000009318	prpf3	100	74.716	ENSELUG00000013624	prpf3	100	75.284	Esox_lucius
ENSCVAG00000009318	prpf3	99	72.340	ENSFCAG00000013940	PRPF3	100	72.624	Felis_catus
ENSCVAG00000009318	prpf3	99	72.199	ENSFDAG00000010365	PRPF3	100	72.482	Fukomys_damarensis
ENSCVAG00000009318	prpf3	100	94.101	ENSFHEG00000021746	prpf3	100	94.101	Fundulus_heteroclitus
ENSCVAG00000009318	prpf3	100	82.361	ENSGMOG00000008535	prpf3	100	82.361	Gadus_morhua
ENSCVAG00000009318	prpf3	99	73.617	ENSGALG00000028205	PRPF3	100	73.475	Gallus_gallus
ENSCVAG00000009318	prpf3	100	91.079	ENSGAFG00000012671	prpf3	100	91.079	Gambusia_affinis
ENSCVAG00000009318	prpf3	100	86.325	ENSGACG00000011792	prpf3	100	86.325	Gasterosteus_aculeatus
ENSCVAG00000009318	prpf3	99	72.908	ENSGAGG00000013765	PRPF3	100	75.623	Gopherus_agassizii
ENSCVAG00000009318	prpf3	86	77.876	ENSGGOG00000013174	PRPF3	100	77.581	Gorilla_gorilla
ENSCVAG00000009318	prpf3	100	87.914	ENSHBUG00000003493	prpf3	100	87.914	Haplochromis_burtoni
ENSCVAG00000009318	prpf3	99	72.199	ENSHGLG00000016569	PRPF3	100	72.482	Heterocephalus_glaber_female
ENSCVAG00000009318	prpf3	99	53.409	ENSHGLG00000016033	-	100	53.267	Heterocephalus_glaber_female
ENSCVAG00000009318	prpf3	99	53.333	ENSHGLG00100008951	-	100	53.191	Heterocephalus_glaber_male
ENSCVAG00000009318	prpf3	99	72.199	ENSHGLG00100007590	PRPF3	100	72.482	Heterocephalus_glaber_male
ENSCVAG00000009318	prpf3	100	82.596	ENSHCOG00000014058	prpf3	100	82.882	Hippocampus_comes
ENSCVAG00000009318	prpf3	100	80.654	ENSIPUG00000000902	PRPF3	100	80.000	Ictalurus_punctatus
ENSCVAG00000009318	prpf3	99	72.340	ENSSTOG00000001889	PRPF3	100	72.624	Ictidomys_tridecemlineatus
ENSCVAG00000009318	prpf3	100	89.255	ENSKMAG00000001390	prpf3	100	89.255	Kryptolebias_marmoratus
ENSCVAG00000009318	prpf3	100	88.889	ENSLBEG00000026310	prpf3	100	89.031	Labrus_bergylta
ENSCVAG00000009318	prpf3	93	68.037	ENSLACG00000010541	PRPF3	100	67.884	Latimeria_chalumnae
ENSCVAG00000009318	prpf3	99	72.340	ENSLAFG00000004713	PRPF3	100	72.624	Loxodonta_africana
ENSCVAG00000009318	prpf3	99	72.340	ENSMFAG00000039791	PRPF3	100	72.624	Macaca_fascicularis
ENSCVAG00000009318	prpf3	92	71.739	ENSMMUG00000016301	PRPF3	97	73.217	Macaca_mulatta
ENSCVAG00000009318	prpf3	99	72.340	ENSMNEG00000038161	PRPF3	100	72.624	Macaca_nemestrina
ENSCVAG00000009318	prpf3	86	77.876	ENSMLEG00000040609	PRPF3	100	77.581	Mandrillus_leucophaeus
ENSCVAG00000009318	prpf3	98	49.570	ENSMLEG00000041065	-	97	49.427	Mandrillus_leucophaeus
ENSCVAG00000009318	prpf3	100	86.752	ENSMAMG00000014968	prpf3	100	86.752	Mastacembelus_armatus
ENSCVAG00000009318	prpf3	100	88.102	ENSMZEG00005015970	prpf3	100	88.478	Maylandia_zebra
ENSCVAG00000009318	prpf3	99	73.617	ENSMGAG00000000707	PRPF3	100	73.475	Meleagris_gallopavo
ENSCVAG00000009318	prpf3	99	72.199	ENSMAUG00000017112	Prpf3	100	72.624	Mesocricetus_auratus
ENSCVAG00000009318	prpf3	99	72.571	ENSMICG00000015386	PRPF3	100	75.267	Microcebus_murinus
ENSCVAG00000009318	prpf3	99	72.340	ENSMOCG00000000242	Prpf3	100	72.624	Microtus_ochrogaster
ENSCVAG00000009318	prpf3	100	80.254	ENSMMOG00000016131	prpf3	100	81.382	Mola_mola
ENSCVAG00000009318	prpf3	99	72.624	ENSMODG00000018774	PRPF3	100	72.908	Monodelphis_domestica
ENSCVAG00000009318	prpf3	100	83.665	ENSMALG00000007257	prpf3	100	83.761	Monopterus_albus
ENSCVAG00000009318	prpf3	99	71.915	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.340	Mus_caroli
ENSCVAG00000009318	prpf3	99	71.915	ENSMUSG00000015748	Prpf3	100	72.340	Mus_musculus
ENSCVAG00000009318	prpf3	99	72.159	MGP_PahariEiJ_G0026798	Prpf3	100	72.443	Mus_pahari
ENSCVAG00000009318	prpf3	99	71.915	MGP_SPRETEiJ_G0026298	Prpf3	100	72.340	Mus_spretus
ENSCVAG00000009318	prpf3	99	70.638	ENSMPUG00000005080	PRPF3	100	71.064	Mustela_putorius_furo
ENSCVAG00000009318	prpf3	99	72.096	ENSMLUG00000004646	-	100	72.380	Myotis_lucifugus
ENSCVAG00000009318	prpf3	99	72.340	ENSNGAG00000000910	Prpf3	100	72.624	Nannospalax_galili
ENSCVAG00000009318	prpf3	100	87.342	ENSNBRG00000003462	prpf3	100	87.342	Neolamprologus_brichardi
ENSCVAG00000009318	prpf3	90	72.742	ENSNLEG00000009841	PRPF3	99	73.217	Nomascus_leucogenys
ENSCVAG00000009318	prpf3	83	64.307	ENSMEUG00000008733	PRPF3	89	64.372	Notamacropus_eugenii
ENSCVAG00000009318	prpf3	99	72.482	ENSOPRG00000010139	PRPF3	100	72.766	Ochotona_princeps
ENSCVAG00000009318	prpf3	99	54.802	ENSODEG00000014412	-	100	54.944	Octodon_degus
ENSCVAG00000009318	prpf3	99	72.057	ENSODEG00000011363	-	100	72.340	Octodon_degus
ENSCVAG00000009318	prpf3	100	88.620	ENSONIG00000006394	prpf3	100	88.905	Oreochromis_niloticus
ENSCVAG00000009318	prpf3	99	56.919	ENSOANG00000015441	PRPF3	100	56.919	Ornithorhynchus_anatinus
ENSCVAG00000009318	prpf3	99	72.340	ENSOCUG00000011760	PRPF3	100	72.624	Oryctolagus_cuniculus
ENSCVAG00000009318	prpf3	100	86.925	ENSORLG00000010330	prpf3	100	86.494	Oryzias_latipes
ENSCVAG00000009318	prpf3	100	86.782	ENSORLG00020009054	prpf3	100	86.351	Oryzias_latipes_hni
ENSCVAG00000009318	prpf3	100	86.494	ENSORLG00015015016	prpf3	100	86.063	Oryzias_latipes_hsok
ENSCVAG00000009318	prpf3	100	88.235	ENSOMEG00000000940	prpf3	100	88.235	Oryzias_melastigma
ENSCVAG00000009318	prpf3	99	69.024	ENSOGAG00000005352	PRPF3	100	69.307	Otolemur_garnettii
ENSCVAG00000009318	prpf3	99	72.340	ENSOARG00000020798	PRPF3	100	72.624	Ovis_aries
ENSCVAG00000009318	prpf3	99	72.199	ENSPPAG00000030983	PRPF3	100	72.482	Pan_paniscus
ENSCVAG00000009318	prpf3	98	55.733	ENSPPAG00000043769	-	99	55.362	Pan_paniscus
ENSCVAG00000009318	prpf3	99	72.340	ENSPPRG00000000731	PRPF3	100	72.624	Panthera_pardus
ENSCVAG00000009318	prpf3	99	72.340	ENSPTIG00000005516	PRPF3	100	72.624	Panthera_tigris_altaica
ENSCVAG00000009318	prpf3	98	54.862	ENSPTRG00000047819	-	99	54.493	Pan_troglodytes
ENSCVAG00000009318	prpf3	99	72.340	ENSPTRG00000001254	PRPF3	100	72.624	Pan_troglodytes
ENSCVAG00000009318	prpf3	99	72.199	ENSPANG00000000499	PRPF3	100	72.482	Papio_anubis
ENSCVAG00000009318	prpf3	100	81.844	ENSPKIG00000010501	prpf3	100	81.418	Paramormyrops_kingsleyae
ENSCVAG00000009318	prpf3	99	73.371	ENSPSIG00000014877	PRPF3	100	73.371	Pelodiscus_sinensis
ENSCVAG00000009318	prpf3	100	75.610	ENSPMGG00000007776	prpf3	100	75.753	Periophthalmus_magnuspinnatus
ENSCVAG00000009318	prpf3	99	72.340	ENSPEMG00000011672	Prpf3	100	72.624	Peromyscus_maniculatus_bairdii
ENSCVAG00000009318	prpf3	62	73.455	ENSPMAG00000005588	prpf3	99	72.124	Petromyzon_marinus
ENSCVAG00000009318	prpf3	99	72.624	ENSPCIG00000008795	PRPF3	100	72.908	Phascolarctos_cinereus
ENSCVAG00000009318	prpf3	100	90.456	ENSPFOG00000013638	prpf3	100	90.896	Poecilia_formosa
ENSCVAG00000009318	prpf3	100	91.942	ENSPLAG00000018103	prpf3	100	91.942	Poecilia_latipinna
ENSCVAG00000009318	prpf3	100	91.942	ENSPMEG00000023546	prpf3	100	91.942	Poecilia_mexicana
ENSCVAG00000009318	prpf3	100	91.799	ENSPREG00000017216	prpf3	100	91.799	Poecilia_reticulata
ENSCVAG00000009318	prpf3	76	62.830	ENSPPYG00000018646	-	99	63.396	Pongo_abelii
ENSCVAG00000009318	prpf3	93	70.928	ENSPPYG00000000900	PRPF3	99	71.233	Pongo_abelii
ENSCVAG00000009318	prpf3	87	72.920	ENSPCAG00000014908	PRPF3	87	73.246	Procavia_capensis
ENSCVAG00000009318	prpf3	99	72.199	ENSPCOG00000013828	PRPF3	100	72.482	Propithecus_coquereli
ENSCVAG00000009318	prpf3	99	71.915	ENSPVAG00000013472	PRPF3	100	72.199	Pteropus_vampyrus
ENSCVAG00000009318	prpf3	100	87.914	ENSPNYG00000004279	prpf3	100	87.914	Pundamilia_nyererei
ENSCVAG00000009318	prpf3	100	80.224	ENSPNAG00000001799	prpf3	100	79.663	Pygocentrus_nattereri
ENSCVAG00000009318	prpf3	99	72.057	ENSRNOG00000025629	Prpf3	100	72.482	Rattus_norvegicus
ENSCVAG00000009318	prpf3	82	75.000	ENSRBIG00000028854	PRPF3	98	74.265	Rhinopithecus_bieti
ENSCVAG00000009318	prpf3	99	72.340	ENSRROG00000027464	PRPF3	100	72.624	Rhinopithecus_roxellana
ENSCVAG00000009318	prpf3	99	66.099	ENSSBOG00000033104	PRPF3	100	66.383	Saimiri_boliviensis_boliviensis
ENSCVAG00000009318	prpf3	99	72.238	ENSSHAG00000009548	PRPF3	100	72.521	Sarcophilus_harrisii
ENSCVAG00000009318	prpf3	100	81.399	ENSSFOG00015022014	prpf3	100	80.839	Scleropages_formosus
ENSCVAG00000009318	prpf3	100	87.042	ENSSMAG00000015739	prpf3	100	87.042	Scophthalmus_maximus
ENSCVAG00000009318	prpf3	100	83.597	ENSSDUG00000006840	prpf3	100	83.885	Seriola_dumerili
ENSCVAG00000009318	prpf3	100	86.779	ENSSLDG00000015423	prpf3	100	86.920	Seriola_lalandi_dorsalis
ENSCVAG00000009318	prpf3	99	72.340	ENSSARG00000011064	PRPF3	100	72.624	Sorex_araneus
ENSCVAG00000009318	prpf3	99	72.448	ENSSPUG00000000809	PRPF3	100	72.958	Sphenodon_punctatus
ENSCVAG00000009318	prpf3	100	88.017	ENSSPAG00000018721	prpf3	100	89.016	Stegastes_partitus
ENSCVAG00000009318	prpf3	99	72.340	ENSSSCG00000030119	PRPF3	100	75.445	Sus_scrofa
ENSCVAG00000009318	prpf3	99	63.598	ENSTGUG00000004552	PRPF3	100	63.456	Taeniopygia_guttata
ENSCVAG00000009318	prpf3	100	81.897	ENSTRUG00000014923	prpf3	100	81.897	Takifugu_rubripes
ENSCVAG00000009318	prpf3	99	81.844	ENSTNIG00000008058	prpf3	100	81.560	Tetraodon_nigroviridis
ENSCVAG00000009318	prpf3	81	72.562	ENSTBEG00000014072	PRPF3	88	73.696	Tupaia_belangeri
ENSCVAG00000009318	prpf3	99	67.376	ENSTTRG00000010616	PRPF3	100	67.660	Tursiops_truncatus
ENSCVAG00000009318	prpf3	79	75.623	ENSUAMG00000009345	PRPF3	100	75.445	Ursus_americanus
ENSCVAG00000009318	prpf3	99	72.340	ENSUMAG00000003720	PRPF3	100	72.624	Ursus_maritimus
ENSCVAG00000009318	prpf3	88	77.778	ENSVPAG00000005425	PRPF3	89	77.551	Vicugna_pacos
ENSCVAG00000009318	prpf3	99	72.340	ENSVVUG00000007933	PRPF3	100	72.624	Vulpes_vulpes
ENSCVAG00000009318	prpf3	99	71.711	ENSXETG00000018654	prpf3	100	71.711	Xenopus_tropicalis
ENSCVAG00000009318	prpf3	100	91.799	ENSXMAG00000016347	prpf3	100	91.799	Xiphophorus_maculatus