EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000009534 (Gene tree)
Gene ID: 107083786
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC107083786
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10292 bases
Position: chrKL652583.1:16050-26341
Accession: 107083786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007838	zf-C2H2	PF00096.26	1.1e-09	1	2
ENSCVAP00000007838	zf-C2H2	PF00096.26	1.1e-09	2	2
ENSCVAP00000007838	zf-met	PF12874.7	4.5e-06	1	2
ENSCVAP00000007838	zf-met	PF12874.7	4.5e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002622	-	3164	XM_015373256	ENSCVAP00000007838	881 (aa)	XP_015228742	UPI0007426BAD

Gene Model

Click here to download ENSCVAG00000009534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009534	-	76	41.326	ENSAOCG00000011236	-	99	40.541	Amphiprion_ocellaris
ENSCVAG00000009534	-	76	42.547	ENSAOCG00000011223	-	99	43.560	Amphiprion_ocellaris
ENSCVAG00000009534	-	76	42.507	ENSAPEG00000007889	-	99	43.560	Amphiprion_percula
ENSCVAG00000009534	-	76	41.036	ENSAPEG00000007910	-	99	40.537	Amphiprion_percula
ENSCVAG00000009534	-	74	43.358	ENSATEG00000011955	-	99	43.324	Anabas_testudineus
ENSCVAG00000009534	-	72	37.160	ENSKMAG00000011226	-	99	36.682	Kryptolebias_marmoratus
ENSCVAG00000009534	-	76	39.174	ENSKMAG00000011235	-	98	38.640	Kryptolebias_marmoratus
ENSCVAG00000009534	-	76	43.515	ENSMALG00000017354	-	99	43.654	Monopterus_albus
ENSCVAG00000009534	-	76	46.045	ENSSDUG00000009322	-	99	45.391	Seriola_dumerili
ENSCVAG00000009534	-	76	43.812	ENSSDUG00000009314	-	99	44.163	Seriola_dumerili
ENSCVAG00000009534	-	76	44.699	ENSSLDG00000012635	-	99	45.390	Seriola_lalandi_dorsalis