EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000009828 (Gene tree)
Gene ID
107085390
Gene Symbol
si:dkey-37o8.1
Alias
fi12b10|wu:fi12b10
Full Name
elongation factor 1-alpha-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
2643 bases
Position
chrKL652623.1:258315-260957
Accession
107085390
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000025220GTP_EFTUPF00009.275.9e-5511
ENSCVAP00000025220MMR_HSR1PF01926.235.4e-0811
ENSCVAP00000025220GTP_EFTU_D2PF03144.252.1e-1211
ENSCVAP00000025220GTP_EFTU_D3PF03143.174.7e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000002219-2171XM_015375677ENSCVAP00000025220456 (aa)XP_015231163UPI0007425A42
Gene Model
Click here to download ENSCVAG00000009828's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009828's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000009828si:dkey-37o8.19870.246ENSCVAG00000019356-9969.130
ENSCVAG00000009828si:dkey-37o8.19638.739ENSCVAG00000000869GSPT17438.753
ENSCVAG00000009828si:dkey-37o8.18634.005ENSCVAG00000016392-7433.753
ENSCVAG00000009828si:dkey-37o8.19370.519ENSCVAG00000021241-9970.519
ENSCVAG00000009828si:dkey-37o8.19831.004ENSCVAG00000006251tufm9430.786
ENSCVAG00000009828si:dkey-37o8.19969.935ENSCVAG00000002957-9969.935
ENSCVAG00000009828si:dkey-37o8.19970.370ENSCVAG00000009938eef1a1b9970.370
ENSCVAG00000009828si:dkey-37o8.19638.462ENSCVAG00000001462hbs1l6138.462
ENSCVAG00000009828si:dkey-37o8.110060.954ENSCVAG00000019378-9960.954
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000009828si:dkey-37o8.19989.868ENSAPOG00000016459si:dkey-37o8.19989.868Acanthochromis_polyacanthus
ENSCVAG00000009828si:dkey-37o8.19687.643ENSACIG00000020985si:dkey-37o8.18287.643Amphilophus_citrinellus
ENSCVAG00000009828si:dkey-37o8.19990.088ENSAOCG00000002663si:dkey-37o8.19990.088Amphiprion_ocellaris
ENSCVAG00000009828si:dkey-37o8.19990.308ENSAPEG00000012670si:dkey-37o8.19990.308Amphiprion_percula
ENSCVAG00000009828si:dkey-37o8.19390.047ENSATEG00000002217si:dkey-37o8.19990.047Anabas_testudineus
ENSCVAG00000009828si:dkey-37o8.19888.839ENSACLG00000003519si:dkey-37o8.19888.839Astatotilapia_calliptera
ENSCVAG00000009828si:dkey-37o8.19984.615ENSAMXG00000002728si:dkey-37o8.19984.615Astyanax_mexicanus
ENSCVAG00000009828si:dkey-37o8.19972.889ENSCPBG00000020570-8972.889Chrysemys_picta_bellii
ENSCVAG00000009828si:dkey-37o8.19984.211ENSCSEG00000019807si:dkey-37o8.19983.514Cynoglossus_semilaevis
ENSCVAG00000009828si:dkey-37o8.19981.938ENSDARG00000071727si:dkey-37o8.19481.938Danio_rerio
ENSCVAG00000009828si:dkey-37o8.19983.297ENSELUG00000007495si:dkey-37o8.19983.297Esox_lucius
ENSCVAG00000009828si:dkey-37o8.19992.967ENSFHEG00000017452si:dkey-37o8.19992.967Fundulus_heteroclitus
ENSCVAG00000009828si:dkey-37o8.19979.956ENSGMOG00000006122si:dkey-37o8.110079.956Gadus_morhua
ENSCVAG00000009828si:dkey-37o8.19887.054ENSGAFG00000000367si:dkey-37o8.19987.054Gambusia_affinis
ENSCVAG00000009828si:dkey-37o8.19987.004ENSGACG00000004505si:dkey-37o8.19987.004Gasterosteus_aculeatus
ENSCVAG00000009828si:dkey-37o8.19973.333ENSGAGG00000007724-9677.885Gopherus_agassizii
ENSCVAG00000009828si:dkey-37o8.19889.062ENSHBUG00000015515si:dkey-37o8.19889.062Haplochromis_burtoni
ENSCVAG00000009828si:dkey-37o8.19880.804ENSHCOG00000001215si:dkey-37o8.19980.804Hippocampus_comes
ENSCVAG00000009828si:dkey-37o8.19983.297ENSIPUG00000004067si:dkey-37o8.19983.297Ictalurus_punctatus
ENSCVAG00000009828si:dkey-37o8.19991.850ENSKMAG00000015910si:dkey-37o8.19991.850Kryptolebias_marmoratus
ENSCVAG00000009828si:dkey-37o8.19989.135ENSLBEG00000021334si:dkey-37o8.19089.135Labrus_bergylta
ENSCVAG00000009828si:dkey-37o8.19975.330ENSLACG00000003948si:dkey-37o8.19975.330Latimeria_chalumnae
ENSCVAG00000009828si:dkey-37o8.19980.482ENSLOCG00000011245si:dkey-37o8.19980.482Lepisosteus_oculatus
ENSCVAG00000009828si:dkey-37o8.19974.558ENSMAMG00000009907si:dkey-37o8.19574.558Mastacembelus_armatus
ENSCVAG00000009828si:dkey-37o8.19888.839ENSMZEG00005018358si:dkey-37o8.19888.839Maylandia_zebra
ENSCVAG00000009828si:dkey-37o8.19888.170ENSMMOG00000004111si:dkey-37o8.19888.170Mola_mola
ENSCVAG00000009828si:dkey-37o8.19680.594ENSMALG00000017152si:dkey-37o8.19980.594Monopterus_albus
ENSCVAG00000009828si:dkey-37o8.19888.393ENSNBRG00000013552si:dkey-37o8.19888.393Neolamprologus_brichardi
ENSCVAG00000009828si:dkey-37o8.19988.546ENSONIG00000006165si:dkey-37o8.19988.546Oreochromis_niloticus
ENSCVAG00000009828si:dkey-37o8.19989.648ENSORLG00000019066si:dkey-37o8.19989.648Oryzias_latipes
ENSCVAG00000009828si:dkey-37o8.19989.648ENSORLG00020008094si:dkey-37o8.19989.648Oryzias_latipes_hni
ENSCVAG00000009828si:dkey-37o8.19989.868ENSORLG00015008410si:dkey-37o8.19989.868Oryzias_latipes_hsok
ENSCVAG00000009828si:dkey-37o8.19990.728ENSOMEG00000001868si:dkey-37o8.19990.728Oryzias_melastigma
ENSCVAG00000009828si:dkey-37o8.19983.114ENSPKIG00000017246si:dkey-37o8.19983.114Paramormyrops_kingsleyae
ENSCVAG00000009828si:dkey-37o8.15967.883ENSPSIG00000008080-9667.883Pelodiscus_sinensis
ENSCVAG00000009828si:dkey-37o8.19993.187ENSPFOG00000013173si:dkey-37o8.19993.187Poecilia_formosa
ENSCVAG00000009828si:dkey-37o8.19992.070ENSPLAG00000010405si:dkey-37o8.19992.070Poecilia_latipinna
ENSCVAG00000009828si:dkey-37o8.19993.187ENSPMEG00000015233si:dkey-37o8.19993.187Poecilia_mexicana
ENSCVAG00000009828si:dkey-37o8.19992.920ENSPREG00000006280si:dkey-37o8.19992.920Poecilia_reticulata
ENSCVAG00000009828si:dkey-37o8.19888.393ENSPNYG00000002059si:dkey-37o8.19888.393Pundamilia_nyererei
ENSCVAG00000009828si:dkey-37o8.19983.956ENSPNAG00000009990si:dkey-37o8.19983.956Pygocentrus_nattereri
ENSCVAG00000009828si:dkey-37o8.19782.393ENSSFOG00015019070si:dkey-37o8.19782.393Scleropages_formosus
ENSCVAG00000009828si:dkey-37o8.19990.308ENSSMAG00000016143si:dkey-37o8.19990.308Scophthalmus_maximus
ENSCVAG00000009828si:dkey-37o8.19989.868ENSSDUG00000009163si:dkey-37o8.19989.868Seriola_dumerili
ENSCVAG00000009828si:dkey-37o8.19990.088ENSSLDG00000023761si:dkey-37o8.19990.088Seriola_lalandi_dorsalis
ENSCVAG00000009828si:dkey-37o8.19971.556ENSSPUG00000007467-9871.556Sphenodon_punctatus
ENSCVAG00000009828si:dkey-37o8.19990.508ENSSPAG00000013856si:dkey-37o8.19990.508Stegastes_partitus
ENSCVAG00000009828si:dkey-37o8.19889.013ENSTRUG00000009006si:dkey-37o8.19989.013Takifugu_rubripes
ENSCVAG00000009828si:dkey-37o8.19888.196ENSTNIG00000017138si:dkey-37o8.19788.196Tetraodon_nigroviridis
ENSCVAG00000009828si:dkey-37o8.19675.399ENSXETG0000001774442Sp509773.836Xenopus_tropicalis
ENSCVAG00000009828si:dkey-37o8.19993.363ENSXCOG00000012296si:dkey-37o8.19996.703Xiphophorus_couchianus
ENSCVAG00000009828si:dkey-37o8.19993.626ENSXMAG00000001998si:dkey-37o8.19993.626Xiphophorus_maculatus

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