EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009832 (Gene tree)
Gene ID: 107103248
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10753 bases
Position: chrKL652534.1:600025-610777
Accession: 107103248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008074	dsrm	PF00035.26	2.8e-35	1	2
ENSCVAP00000008074	dsrm	PF00035.26	2.8e-35	2	2
ENSCVAP00000008074	DND1_DSRM	PF14709.7	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002237	-	4474	XM_015402832	ENSCVAP00000008074	345 (aa)	XP_015258318	UPI000742587C

Gene Model

Click here to download ENSCVAG00000009832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009832	tarbp2	92	42.453	ENSCVAG00000002749	prkra	91	42.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009832	tarbp2	100	66.125	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSCVAG00000009832	tarbp2	100	91.014	ENSAPOG00000019892	tarbp2	100	91.014	Acanthochromis_polyacanthus
ENSCVAG00000009832	tarbp2	100	66.396	ENSAMEG00000012601	TARBP2	100	65.684	Ailuropoda_melanoleuca
ENSCVAG00000009832	tarbp2	100	88.986	ENSACIG00000016780	tarbp2	100	88.986	Amphilophus_citrinellus
ENSCVAG00000009832	tarbp2	100	90.725	ENSAOCG00000005201	tarbp2	100	90.725	Amphiprion_ocellaris
ENSCVAG00000009832	tarbp2	100	90.725	ENSAPEG00000008376	tarbp2	100	90.725	Amphiprion_percula
ENSCVAG00000009832	tarbp2	100	89.855	ENSATEG00000025012	tarbp2	100	89.855	Anabas_testudineus
ENSCVAG00000009832	tarbp2	99	69.359	ENSACAG00000001100	TARBP2	99	69.359	Anolis_carolinensis
ENSCVAG00000009832	tarbp2	100	65.583	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSCVAG00000009832	tarbp2	97	87.761	ENSACLG00000018569	tarbp2	97	87.761	Astatotilapia_calliptera
ENSCVAG00000009832	tarbp2	100	84.393	ENSAMXG00000016665	tarbp2	100	84.393	Astyanax_mexicanus
ENSCVAG00000009832	tarbp2	100	66.667	ENSBTAG00000000435	TARBP2	100	66.220	Bos_taurus
ENSCVAG00000009832	tarbp2	100	65.854	ENSCJAG00000018668	TARBP2	100	65.147	Callithrix_jacchus
ENSCVAG00000009832	tarbp2	100	67.714	ENSCAFG00000006874	TARBP2	100	67.714	Canis_familiaris
ENSCVAG00000009832	tarbp2	100	66.396	ENSCAFG00020020735	TARBP2	100	67.330	Canis_lupus_dingo
ENSCVAG00000009832	tarbp2	100	65.684	ENSCHIG00000026017	TARBP2	100	65.252	Capra_hircus
ENSCVAG00000009832	tarbp2	100	66.667	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSCVAG00000009832	tarbp2	65	70.222	ENSCAPG00000008981	TARBP2	100	70.222	Cavia_aperea
ENSCVAG00000009832	tarbp2	100	66.120	ENSCPOG00000001009	TARBP2	100	66.940	Cavia_porcellus
ENSCVAG00000009832	tarbp2	100	65.312	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSCVAG00000009832	tarbp2	100	66.125	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSCVAG00000009832	tarbp2	100	66.667	ENSCLAG00000009175	TARBP2	100	66.667	Chinchilla_lanigera
ENSCVAG00000009832	tarbp2	100	66.125	ENSCSAG00000005479	TARBP2	100	65.147	Chlorocebus_sabaeus
ENSCVAG00000009832	tarbp2	100	69.252	ENSCPBG00000000654	TARBP2	100	70.882	Chrysemys_picta_bellii
ENSCVAG00000009832	tarbp2	100	66.125	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSCVAG00000009832	tarbp2	100	65.205	ENSCGRG00001011856	TARBP2	100	65.753	Cricetulus_griseus_chok1gshd
ENSCVAG00000009832	tarbp2	100	65.205	ENSCGRG00000009088	TARBP2	100	67.490	Cricetulus_griseus_crigri
ENSCVAG00000009832	tarbp2	100	88.986	ENSCSEG00000010631	tarbp2	100	88.986	Cynoglossus_semilaevis
ENSCVAG00000009832	tarbp2	100	81.556	ENSDARG00000070471	tarbp2	100	81.609	Danio_rerio
ENSCVAG00000009832	tarbp2	100	66.396	ENSDNOG00000002144	TARBP2	100	65.416	Dasypus_novemcinctus
ENSCVAG00000009832	tarbp2	64	70.270	ENSDORG00000001390	Tarbp2	91	70.270	Dipodomys_ordii
ENSCVAG00000009832	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSCVAG00000009832	tarbp2	95	58.308	ENSEBUG00000002377	tarbp2	98	59.215	Eptatretus_burgeri
ENSCVAG00000009832	tarbp2	100	66.125	ENSEASG00005010030	TARBP2	100	65.684	Equus_asinus_asinus
ENSCVAG00000009832	tarbp2	100	67.416	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSCVAG00000009832	tarbp2	84	62.821	ENSEEUG00000001128	-	99	62.821	Erinaceus_europaeus
ENSCVAG00000009832	tarbp2	100	84.195	ENSELUG00000010642	tarbp2	100	85.632	Esox_lucius
ENSCVAG00000009832	tarbp2	100	66.938	ENSFCAG00000007757	TARBP2	100	65.952	Felis_catus
ENSCVAG00000009832	tarbp2	100	66.940	ENSFDAG00000011932	TARBP2	100	68.852	Fukomys_damarensis
ENSCVAG00000009832	tarbp2	94	95.370	ENSFHEG00000016118	tarbp2	100	95.370	Fundulus_heteroclitus
ENSCVAG00000009832	tarbp2	100	85.014	ENSGMOG00000001290	tarbp2	100	85.014	Gadus_morhua
ENSCVAG00000009832	tarbp2	64	69.820	ENSGALG00000038939	-	84	69.820	Gallus_gallus
ENSCVAG00000009832	tarbp2	100	94.783	ENSGAFG00000013341	tarbp2	100	94.783	Gambusia_affinis
ENSCVAG00000009832	tarbp2	100	86.761	ENSGACG00000006645	tarbp2	100	87.042	Gasterosteus_aculeatus
ENSCVAG00000009832	tarbp2	100	69.529	ENSGAGG00000021169	TARBP2	100	69.252	Gopherus_agassizii
ENSCVAG00000009832	tarbp2	100	65.854	ENSGGOG00000012637	TARBP2	94	74.324	Gorilla_gorilla
ENSCVAG00000009832	tarbp2	100	89.565	ENSHBUG00000018639	tarbp2	100	89.565	Haplochromis_burtoni
ENSCVAG00000009832	tarbp2	100	66.667	ENSHGLG00000001284	TARBP2	100	66.393	Heterocephalus_glaber_female
ENSCVAG00000009832	tarbp2	100	66.667	ENSHGLG00100011274	TARBP2	100	66.393	Heterocephalus_glaber_male
ENSCVAG00000009832	tarbp2	100	85.507	ENSHCOG00000001027	tarbp2	100	85.507	Hippocampus_comes
ENSCVAG00000009832	tarbp2	100	81.375	ENSIPUG00000023701	tarbp2	100	81.375	Ictalurus_punctatus
ENSCVAG00000009832	tarbp2	95	69.628	ENSSTOG00000003678	TARBP2	100	68.852	Ictidomys_tridecemlineatus
ENSCVAG00000009832	tarbp2	100	92.754	ENSKMAG00000012142	tarbp2	100	92.754	Kryptolebias_marmoratus
ENSCVAG00000009832	tarbp2	100	89.266	ENSLBEG00000015027	tarbp2	100	89.266	Labrus_bergylta
ENSCVAG00000009832	tarbp2	95	65.244	ENSLACG00000007087	TARBP2	95	66.261	Latimeria_chalumnae
ENSCVAG00000009832	tarbp2	100	80.172	ENSLOCG00000005711	tarbp2	100	80.172	Lepisosteus_oculatus
ENSCVAG00000009832	tarbp2	71	64.504	ENSLAFG00000002620	TARBP2	93	64.504	Loxodonta_africana
ENSCVAG00000009832	tarbp2	100	66.125	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSCVAG00000009832	tarbp2	100	66.396	ENSMMUG00000018492	TARBP2	100	65.416	Macaca_mulatta
ENSCVAG00000009832	tarbp2	100	66.125	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSCVAG00000009832	tarbp2	100	66.125	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSCVAG00000009832	tarbp2	95	88.685	ENSMAMG00000010272	tarbp2	97	86.047	Mastacembelus_armatus
ENSCVAG00000009832	tarbp2	100	89.275	ENSMZEG00005006895	tarbp2	100	89.275	Maylandia_zebra
ENSCVAG00000009832	tarbp2	100	64.932	ENSMAUG00000019805	Tarbp2	100	65.041	Mesocricetus_auratus
ENSCVAG00000009832	tarbp2	94	68.678	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSCVAG00000009832	tarbp2	100	66.033	ENSMOCG00000003691	Tarbp2	100	66.033	Microtus_ochrogaster
ENSCVAG00000009832	tarbp2	94	87.879	ENSMMOG00000010374	tarbp2	100	87.879	Mola_mola
ENSCVAG00000009832	tarbp2	100	89.275	ENSMALG00000009773	tarbp2	100	89.275	Monopterus_albus
ENSCVAG00000009832	tarbp2	100	66.027	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSCVAG00000009832	tarbp2	100	66.027	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSCVAG00000009832	tarbp2	100	66.027	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSCVAG00000009832	tarbp2	100	66.027	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSCVAG00000009832	tarbp2	100	65.591	ENSMPUG00000005944	TARBP2	100	65.591	Mustela_putorius_furo
ENSCVAG00000009832	tarbp2	100	66.396	ENSMLUG00000010035	TARBP2	100	66.220	Myotis_lucifugus
ENSCVAG00000009832	tarbp2	100	66.125	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSCVAG00000009832	tarbp2	100	69.275	ENSMEUG00000001916	TARBP2	100	69.275	Notamacropus_eugenii
ENSCVAG00000009832	tarbp2	65	71.111	ENSOPRG00000011397	TARBP2	100	71.111	Ochotona_princeps
ENSCVAG00000009832	tarbp2	60	72.566	ENSODEG00000013413	TARBP2	100	72.124	Octodon_degus
ENSCVAG00000009832	tarbp2	95	85.057	ENSONIG00000005115	tarbp2	96	85.057	Oreochromis_niloticus
ENSCVAG00000009832	tarbp2	100	66.757	ENSOCUG00000005700	TARBP2	100	66.757	Oryctolagus_cuniculus
ENSCVAG00000009832	tarbp2	100	91.304	ENSORLG00000005209	tarbp2	100	91.304	Oryzias_latipes
ENSCVAG00000009832	tarbp2	100	91.014	ENSORLG00020017755	tarbp2	100	91.014	Oryzias_latipes_hni
ENSCVAG00000009832	tarbp2	100	91.304	ENSORLG00015013237	tarbp2	100	91.304	Oryzias_latipes_hsok
ENSCVAG00000009832	tarbp2	100	91.594	ENSOMEG00000018860	tarbp2	100	91.594	Oryzias_melastigma
ENSCVAG00000009832	tarbp2	100	65.574	ENSOGAG00000001744	TARBP2	100	65.135	Otolemur_garnettii
ENSCVAG00000009832	tarbp2	100	66.396	ENSOARG00000016437	TARBP2	100	65.952	Ovis_aries
ENSCVAG00000009832	tarbp2	100	66.125	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSCVAG00000009832	tarbp2	100	66.938	ENSPPRG00000000189	TARBP2	100	65.952	Panthera_pardus
ENSCVAG00000009832	tarbp2	100	66.757	ENSPTIG00000007859	TARBP2	100	66.757	Panthera_tigris_altaica
ENSCVAG00000009832	tarbp2	100	66.125	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSCVAG00000009832	tarbp2	100	66.125	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSCVAG00000009832	tarbp2	100	79.494	ENSPKIG00000002455	tarbp2	100	78.933	Paramormyrops_kingsleyae
ENSCVAG00000009832	tarbp2	100	88.406	ENSPMGG00000006497	tarbp2	100	88.406	Periophthalmus_magnuspinnatus
ENSCVAG00000009832	tarbp2	100	64.770	ENSPEMG00000014285	Tarbp2	100	64.770	Peromyscus_maniculatus_bairdii
ENSCVAG00000009832	tarbp2	92	60.625	ENSPMAG00000000105	tarbp2	99	60.312	Petromyzon_marinus
ENSCVAG00000009832	tarbp2	100	68.986	ENSPCIG00000006672	TARBP2	92	68.986	Phascolarctos_cinereus
ENSCVAG00000009832	tarbp2	100	95.942	ENSPFOG00000007586	tarbp2	100	95.942	Poecilia_formosa
ENSCVAG00000009832	tarbp2	100	95.652	ENSPLAG00000017659	tarbp2	100	95.652	Poecilia_latipinna
ENSCVAG00000009832	tarbp2	100	95.942	ENSPMEG00000007775	tarbp2	100	95.942	Poecilia_mexicana
ENSCVAG00000009832	tarbp2	100	95.652	ENSPREG00000007815	tarbp2	100	95.652	Poecilia_reticulata
ENSCVAG00000009832	tarbp2	100	64.957	ENSPPYG00000004583	TARBP2	95	67.560	Pongo_abelii
ENSCVAG00000009832	tarbp2	78	64.948	ENSPCAG00000005352	TARBP2	63	69.565	Procavia_capensis
ENSCVAG00000009832	tarbp2	100	66.396	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSCVAG00000009832	tarbp2	100	64.075	ENSPVAG00000012286	TARBP2	100	64.770	Pteropus_vampyrus
ENSCVAG00000009832	tarbp2	100	89.565	ENSPNYG00000014125	tarbp2	100	89.565	Pundamilia_nyererei
ENSCVAG00000009832	tarbp2	100	83.815	ENSPNAG00000011128	tarbp2	100	83.815	Pygocentrus_nattereri
ENSCVAG00000009832	tarbp2	100	64.932	ENSRNOG00000042355	Tarbp2	100	65.312	Rattus_norvegicus
ENSCVAG00000009832	tarbp2	100	65.312	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSCVAG00000009832	tarbp2	100	65.312	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSCVAG00000009832	tarbp2	100	65.854	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSCVAG00000009832	tarbp2	94	71.605	ENSSHAG00000007064	TARBP2	100	71.605	Sarcophilus_harrisii
ENSCVAG00000009832	tarbp2	100	79.330	ENSSFOG00015010784	tarbp2	100	80.447	Scleropages_formosus
ENSCVAG00000009832	tarbp2	100	89.174	ENSSMAG00000012769	tarbp2	100	89.174	Scophthalmus_maximus
ENSCVAG00000009832	tarbp2	100	91.014	ENSSDUG00000018818	tarbp2	100	91.014	Seriola_dumerili
ENSCVAG00000009832	tarbp2	100	90.435	ENSSLDG00000001835	tarbp2	100	90.435	Seriola_lalandi_dorsalis
ENSCVAG00000009832	tarbp2	76	67.647	ENSSARG00000001010	TARBP2	73	67.647	Sorex_araneus
ENSCVAG00000009832	tarbp2	95	52.424	ENSSPUG00000005895	TARBP2	94	53.153	Sphenodon_punctatus
ENSCVAG00000009832	tarbp2	100	91.594	ENSSPAG00000022797	tarbp2	100	91.594	Stegastes_partitus
ENSCVAG00000009832	tarbp2	100	66.125	ENSSSCG00000000276	TARBP2	100	67.330	Sus_scrofa
ENSCVAG00000009832	tarbp2	71	56.371	ENSTGUG00000017031	TARBP2	100	56.371	Taeniopygia_guttata
ENSCVAG00000009832	tarbp2	100	90.145	ENSTRUG00000014379	tarbp2	100	90.145	Takifugu_rubripes
ENSCVAG00000009832	tarbp2	100	89.275	ENSTNIG00000007065	tarbp2	100	89.275	Tetraodon_nigroviridis
ENSCVAG00000009832	tarbp2	50	68.182	ENSTBEG00000012751	-	55	68.182	Tupaia_belangeri
ENSCVAG00000009832	tarbp2	100	65.574	ENSTTRG00000017177	TARBP2	100	65.405	Tursiops_truncatus
ENSCVAG00000009832	tarbp2	100	66.667	ENSUAMG00000009011	TARBP2	100	65.952	Ursus_americanus
ENSCVAG00000009832	tarbp2	100	66.125	ENSUMAG00000010461	TARBP2	100	65.416	Ursus_maritimus
ENSCVAG00000009832	tarbp2	100	66.396	ENSVVUG00000028150	TARBP2	100	67.330	Vulpes_vulpes
ENSCVAG00000009832	tarbp2	97	70.930	ENSXETG00000012644	tarbp2	97	70.930	Xenopus_tropicalis
ENSCVAG00000009832	tarbp2	100	94.783	ENSXMAG00000017836	tarbp2	100	94.783	Xiphophorus_maculatus