EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000009901 (Gene tree)
Gene ID: 107101912
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6136 bases
Position: chrKL653672.1:30874-37009
Accession: 107101912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025239	TruB_N	PF01509.18	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002140	-	2665	XM_015400998	ENSCVAP00000025239	332 (aa)	XP_015256484	UPI0007426163

Gene Model

Click here to download ENSCVAG00000009901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009901	trub2	83	55.596	ENSG00000167112	TRUB2	83	55.596	Homo_sapiens
ENSCVAG00000009901	trub2	76	71.429	ENSAPOG00000018284	-	94	71.429	Acanthochromis_polyacanthus
ENSCVAG00000009901	trub2	50	70.659	ENSAPOG00000018216	-	80	70.659	Acanthochromis_polyacanthus
ENSCVAG00000009901	trub2	74	72.653	ENSAPOG00000015733	trub2	88	72.653	Acanthochromis_polyacanthus
ENSCVAG00000009901	trub2	84	54.965	ENSAMEG00000015395	TRUB2	85	54.965	Ailuropoda_melanoleuca
ENSCVAG00000009901	trub2	98	73.313	ENSACIG00000016500	trub2	99	73.313	Amphilophus_citrinellus
ENSCVAG00000009901	trub2	98	73.476	ENSAOCG00000002330	trub2	96	73.476	Amphiprion_ocellaris
ENSCVAG00000009901	trub2	98	73.476	ENSAPEG00000013177	trub2	96	73.476	Amphiprion_percula
ENSCVAG00000009901	trub2	87	72.509	ENSATEG00000011371	trub2	92	72.509	Anabas_testudineus
ENSCVAG00000009901	trub2	87	49.315	ENSAPLG00000009254	TRUB2	91	51.071	Anas_platyrhynchos
ENSCVAG00000009901	trub2	84	53.929	ENSACAG00000007331	TRUB2	85	53.929	Anolis_carolinensis
ENSCVAG00000009901	trub2	83	56.679	ENSANAG00000036234	TRUB2	89	56.679	Aotus_nancymaae
ENSCVAG00000009901	trub2	97	71.385	ENSACLG00000010793	trub2	98	71.385	Astatotilapia_calliptera
ENSCVAG00000009901	trub2	99	55.120	ENSAMXG00000031679	trub2	94	55.120	Astyanax_mexicanus
ENSCVAG00000009901	trub2	83	55.957	ENSCJAG00000020009	TRUB2	83	55.957	Callithrix_jacchus
ENSCVAG00000009901	trub2	86	52.013	ENSCAFG00000020068	TRUB2	84	53.929	Canis_familiaris
ENSCVAG00000009901	trub2	51	51.724	ENSCAFG00020017325	-	96	51.724	Canis_lupus_dingo
ENSCVAG00000009901	trub2	83	54.513	ENSCHIG00000021160	TRUB2	83	54.513	Capra_hircus
ENSCVAG00000009901	trub2	83	56.159	ENSTSYG00000034163	TRUB2	83	56.159	Carlito_syrichta
ENSCVAG00000009901	trub2	72	56.017	ENSCAPG00000000223	TRUB2	85	52.632	Cavia_aperea
ENSCVAG00000009901	trub2	86	55.556	ENSCPOG00000013535	TRUB2	91	52.778	Cavia_porcellus
ENSCVAG00000009901	trub2	86	54.861	ENSCCAG00000026531	-	87	54.861	Cebus_capucinus
ENSCVAG00000009901	trub2	84	52.669	ENSCCAG00000028463	-	85	52.669	Cebus_capucinus
ENSCVAG00000009901	trub2	83	56.679	ENSCATG00000038234	TRUB2	83	56.679	Cercocebus_atys
ENSCVAG00000009901	trub2	92	52.581	ENSCLAG00000001702	TRUB2	92	52.581	Chinchilla_lanigera
ENSCVAG00000009901	trub2	83	53.381	ENSCSAG00000014117	TRUB2	83	53.381	Chlorocebus_sabaeus
ENSCVAG00000009901	trub2	96	49.688	ENSCHOG00000001555	TRUB2	95	49.688	Choloepus_hoffmanni
ENSCVAG00000009901	trub2	85	53.710	ENSCPBG00000025186	TRUB2	83	53.710	Chrysemys_picta_bellii
ENSCVAG00000009901	trub2	86	32.302	ENSCSAVG00000003930	-	89	32.302	Ciona_savignyi
ENSCVAG00000009901	trub2	83	50.181	ENSCANG00000016135	TRUB2	82	50.181	Colobus_angolensis_palliatus
ENSCVAG00000009901	trub2	83	53.069	ENSCGRG00001024441	Trub2	90	49.704	Cricetulus_griseus_chok1gshd
ENSCVAG00000009901	trub2	83	53.069	ENSCGRG00000005633	Trub2	83	53.069	Cricetulus_griseus_crigri
ENSCVAG00000009901	trub2	89	67.340	ENSCSEG00000001331	trub2	89	67.340	Cynoglossus_semilaevis
ENSCVAG00000009901	trub2	89	61.204	ENSDARG00000028379	trub2	84	61.204	Danio_rerio
ENSCVAG00000009901	trub2	83	53.986	ENSDNOG00000045679	-	83	53.986	Dasypus_novemcinctus
ENSCVAG00000009901	trub2	73	39.200	ENSDNOG00000043967	-	75	39.200	Dasypus_novemcinctus
ENSCVAG00000009901	trub2	92	52.258	ENSDORG00000016222	Trub2	97	52.258	Dipodomys_ordii
ENSCVAG00000009901	trub2	86	32.646	FBgn0033060	CG7849	91	32.646	Drosophila_melanogaster
ENSCVAG00000009901	trub2	83	53.986	ENSETEG00000009114	TRUB2	85	53.986	Echinops_telfairi
ENSCVAG00000009901	trub2	65	45.312	ENSEBUG00000015723	trub2	80	45.312	Eptatretus_burgeri
ENSCVAG00000009901	trub2	83	55.596	ENSEASG00005016819	TRUB2	83	55.596	Equus_asinus_asinus
ENSCVAG00000009901	trub2	83	55.596	ENSECAG00000023520	TRUB2	83	55.596	Equus_caballus
ENSCVAG00000009901	trub2	83	54.152	ENSEEUG00000008908	TRUB2	84	54.152	Erinaceus_europaeus
ENSCVAG00000009901	trub2	89	64.744	ENSELUG00000002376	trub2	97	64.744	Esox_lucius
ENSCVAG00000009901	trub2	83	55.235	ENSFCAG00000005839	TRUB2	86	55.235	Felis_catus
ENSCVAG00000009901	trub2	75	55.242	ENSFALG00000001364	TRUB2	83	53.488	Ficedula_albicollis
ENSCVAG00000009901	trub2	83	55.235	ENSFDAG00000021374	TRUB2	87	53.254	Fukomys_damarensis
ENSCVAG00000009901	trub2	99	71.988	ENSFHEG00000014655	trub2	99	71.988	Fundulus_heteroclitus
ENSCVAG00000009901	trub2	88	59.589	ENSGMOG00000000981	trub2	98	59.589	Gadus_morhua
ENSCVAG00000009901	trub2	82	55.147	ENSGALG00000004920	TRUB2	67	55.147	Gallus_gallus
ENSCVAG00000009901	trub2	99	75.904	ENSGAFG00000010107	trub2	99	76.205	Gambusia_affinis
ENSCVAG00000009901	trub2	89	75.839	ENSGACG00000001476	trub2	90	75.839	Gasterosteus_aculeatus
ENSCVAG00000009901	trub2	85	53.710	ENSGAGG00000022872	TRUB2	84	53.710	Gopherus_agassizii
ENSCVAG00000009901	trub2	83	55.235	ENSGGOG00000014780	TRUB2	83	55.235	Gorilla_gorilla
ENSCVAG00000009901	trub2	97	72.000	ENSHBUG00000022384	trub2	98	72.000	Haplochromis_burtoni
ENSCVAG00000009901	trub2	83	54.513	ENSHGLG00000016715	TRUB2	83	54.513	Heterocephalus_glaber_female
ENSCVAG00000009901	trub2	83	54.513	ENSHGLG00100016548	TRUB2	83	54.513	Heterocephalus_glaber_male
ENSCVAG00000009901	trub2	100	67.169	ENSHCOG00000017748	trub2	99	67.169	Hippocampus_comes
ENSCVAG00000009901	trub2	89	60.201	ENSIPUG00000017725	hdhd3	52	60.201	Ictalurus_punctatus
ENSCVAG00000009901	trub2	83	54.348	ENSSTOG00000008024	-	87	52.381	Ictidomys_tridecemlineatus
ENSCVAG00000009901	trub2	83	54.348	ENSSTOG00000022617	-	84	54.348	Ictidomys_tridecemlineatus
ENSCVAG00000009901	trub2	91	47.213	ENSJJAG00000019181	Trub2	91	47.213	Jaculus_jaculus
ENSCVAG00000009901	trub2	98	72.948	ENSKMAG00000007861	trub2	98	72.948	Kryptolebias_marmoratus
ENSCVAG00000009901	trub2	95	71.698	ENSLBEG00000000907	trub2	94	71.698	Labrus_bergylta
ENSCVAG00000009901	trub2	98	49.394	ENSLACG00000001515	TRUB2	98	49.394	Latimeria_chalumnae
ENSCVAG00000009901	trub2	86	61.724	ENSLOCG00000000885	trub2	95	61.724	Lepisosteus_oculatus
ENSCVAG00000009901	trub2	83	55.072	ENSLAFG00000002174	TRUB2	91	55.072	Loxodonta_africana
ENSCVAG00000009901	trub2	83	55.797	ENSMFAG00000000881	TRUB2	83	55.797	Macaca_fascicularis
ENSCVAG00000009901	trub2	83	55.797	ENSMMUG00000014146	TRUB2	83	55.797	Macaca_mulatta
ENSCVAG00000009901	trub2	83	56.318	ENSMNEG00000011189	TRUB2	83	56.318	Macaca_nemestrina
ENSCVAG00000009901	trub2	83	55.797	ENSMLEG00000037270	TRUB2	83	55.797	Mandrillus_leucophaeus
ENSCVAG00000009901	trub2	88	74.915	ENSMAMG00000023643	trub2	98	74.915	Mastacembelus_armatus
ENSCVAG00000009901	trub2	97	71.692	ENSMZEG00005016018	trub2	98	71.692	Maylandia_zebra
ENSCVAG00000009901	trub2	55	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSCVAG00000009901	trub2	96	48.765	ENSMAUG00000010403	Trub2	96	48.765	Mesocricetus_auratus
ENSCVAG00000009901	trub2	83	55.957	ENSMICG00000047032	TRUB2	83	55.957	Microcebus_murinus
ENSCVAG00000009901	trub2	83	53.261	ENSMOCG00000014291	Trub2	91	53.261	Microtus_ochrogaster
ENSCVAG00000009901	trub2	94	71.656	ENSMMOG00000021674	trub2	97	71.656	Mola_mola
ENSCVAG00000009901	trub2	84	52.857	ENSMODG00000005940	TRUB2	95	52.857	Monodelphis_domestica
ENSCVAG00000009901	trub2	98	71.601	ENSMALG00000021231	trub2	98	71.601	Monopterus_albus
ENSCVAG00000009901	trub2	83	52.536	MGP_CAROLIEiJ_G0023368	Trub2	95	46.196	Mus_caroli
ENSCVAG00000009901	trub2	83	53.430	ENSMUSG00000039826	Trub2	95	47.568	Mus_musculus
ENSCVAG00000009901	trub2	83	53.430	MGP_PahariEiJ_G0024826	Trub2	87	50.296	Mus_pahari
ENSCVAG00000009901	trub2	83	53.791	MGP_SPRETEiJ_G0024286	Trub2	95	48.108	Mus_spretus
ENSCVAG00000009901	trub2	84	53.191	ENSMPUG00000013206	TRUB2	77	53.191	Mustela_putorius_furo
ENSCVAG00000009901	trub2	83	55.235	ENSMLUG00000005256	TRUB2	83	55.235	Myotis_lucifugus
ENSCVAG00000009901	trub2	83	53.261	ENSNGAG00000018679	Trub2	84	53.261	Nannospalax_galili
ENSCVAG00000009901	trub2	98	71.472	ENSNBRG00000016294	trub2	99	71.472	Neolamprologus_brichardi
ENSCVAG00000009901	trub2	83	55.235	ENSNLEG00000017556	TRUB2	83	55.235	Nomascus_leucogenys
ENSCVAG00000009901	trub2	83	54.152	ENSMEUG00000000484	TRUB2	89	54.152	Notamacropus_eugenii
ENSCVAG00000009901	trub2	83	51.449	ENSOPRG00000001981	TRUB2	83	51.449	Ochotona_princeps
ENSCVAG00000009901	trub2	83	55.072	ENSODEG00000017292	TRUB2	85	55.072	Octodon_degus
ENSCVAG00000009901	trub2	98	72.086	ENSONIG00000004230	trub2	99	72.086	Oreochromis_niloticus
ENSCVAG00000009901	trub2	56	51.852	ENSOANG00000029023	-	83	51.852	Ornithorhynchus_anatinus
ENSCVAG00000009901	trub2	83	54.152	ENSOCUG00000026296	TRUB2	76	54.152	Oryctolagus_cuniculus
ENSCVAG00000009901	trub2	92	70.684	ENSORLG00000020011	trub2	92	72.168	Oryzias_latipes
ENSCVAG00000009901	trub2	92	71.475	ENSORLG00020011028	trub2	90	71.475	Oryzias_latipes_hni
ENSCVAG00000009901	trub2	92	71.803	ENSORLG00015007494	trub2	94	71.803	Oryzias_latipes_hsok
ENSCVAG00000009901	trub2	97	71.517	ENSOMEG00000006702	trub2	98	71.517	Oryzias_melastigma
ENSCVAG00000009901	trub2	59	55.897	ENSOARG00000003785	-	81	54.634	Ovis_aries
ENSCVAG00000009901	trub2	83	54.348	ENSOARG00000010579	-	83	54.348	Ovis_aries
ENSCVAG00000009901	trub2	83	55.957	ENSPPAG00000043146	TRUB2	83	55.957	Pan_paniscus
ENSCVAG00000009901	trub2	83	55.235	ENSPPRG00000006307	TRUB2	86	55.235	Panthera_pardus
ENSCVAG00000009901	trub2	83	55.596	ENSPTIG00000012366	TRUB2	86	55.596	Panthera_tigris_altaica
ENSCVAG00000009901	trub2	83	55.596	ENSPTRG00000052151	-	83	55.596	Pan_troglodytes
ENSCVAG00000009901	trub2	83	55.596	ENSPTRG00000021423	TRUB2	83	55.596	Pan_troglodytes
ENSCVAG00000009901	trub2	83	55.797	ENSPANG00000025856	TRUB2	83	55.797	Papio_anubis
ENSCVAG00000009901	trub2	90	64.784	ENSPKIG00000019769	trub2	98	64.784	Paramormyrops_kingsleyae
ENSCVAG00000009901	trub2	85	50.352	ENSPSIG00000015701	TRUB2	95	50.352	Pelodiscus_sinensis
ENSCVAG00000009901	trub2	92	67.097	ENSPMGG00000010206	trub2	97	67.097	Periophthalmus_magnuspinnatus
ENSCVAG00000009901	trub2	88	51.515	ENSPEMG00000017893	Trub2	89	51.515	Peromyscus_maniculatus_bairdii
ENSCVAG00000009901	trub2	86	53.684	ENSPCIG00000026731	TRUB2	92	53.684	Phascolarctos_cinereus
ENSCVAG00000009901	trub2	95	76.636	ENSPFOG00000018018	trub2	85	76.636	Poecilia_formosa
ENSCVAG00000009901	trub2	95	76.947	ENSPLAG00000010484	trub2	92	76.947	Poecilia_latipinna
ENSCVAG00000009901	trub2	99	76.418	ENSPMEG00000012913	trub2	99	76.418	Poecilia_mexicana
ENSCVAG00000009901	trub2	99	75.150	ENSPREG00000002549	trub2	99	75.150	Poecilia_reticulata
ENSCVAG00000009901	trub2	83	55.235	ENSPPYG00000019650	TRUB2	85	55.235	Pongo_abelii
ENSCVAG00000009901	trub2	83	56.679	ENSPCAG00000015068	TRUB2	84	56.679	Procavia_capensis
ENSCVAG00000009901	trub2	83	55.957	ENSPCOG00000017100	TRUB2	83	55.957	Propithecus_coquereli
ENSCVAG00000009901	trub2	78	55.000	ENSPVAG00000001224	TRUB2	87	55.000	Pteropus_vampyrus
ENSCVAG00000009901	trub2	97	72.000	ENSPNYG00000013666	trub2	98	72.000	Pundamilia_nyererei
ENSCVAG00000009901	trub2	87	60.825	ENSPNAG00000017292	trub2	83	60.825	Pygocentrus_nattereri
ENSCVAG00000009901	trub2	83	53.430	ENSRNOG00000043189	Trub2	85	53.430	Rattus_norvegicus
ENSCVAG00000009901	trub2	83	50.903	ENSRBIG00000006965	TRUB2	82	50.903	Rhinopithecus_bieti
ENSCVAG00000009901	trub2	83	56.318	ENSRROG00000042928	TRUB2	83	56.318	Rhinopithecus_roxellana
ENSCVAG00000009901	trub2	83	55.596	ENSSBOG00000022439	TRUB2	83	55.596	Saimiri_boliviensis_boliviensis
ENSCVAG00000009901	trub2	86	63.763	ENSSFOG00015013391	trub2	92	63.763	Scleropages_formosus
ENSCVAG00000009901	trub2	97	70.769	ENSSMAG00000020820	trub2	99	70.769	Scophthalmus_maximus
ENSCVAG00000009901	trub2	99	71.601	ENSSDUG00000016928	trub2	99	71.601	Seriola_dumerili
ENSCVAG00000009901	trub2	99	70.695	ENSSLDG00000024701	trub2	99	70.695	Seriola_lalandi_dorsalis
ENSCVAG00000009901	trub2	88	51.027	ENSSPUG00000015515	TRUB2	87	51.027	Sphenodon_punctatus
ENSCVAG00000009901	trub2	98	71.646	ENSSPAG00000017865	trub2	98	71.646	Stegastes_partitus
ENSCVAG00000009901	trub2	83	55.596	ENSSSCG00000005645	TRUB2	84	55.020	Sus_scrofa
ENSCVAG00000009901	trub2	77	53.333	ENSTGUG00000003704	TRUB2	98	53.333	Taeniopygia_guttata
ENSCVAG00000009901	trub2	89	71.141	ENSTRUG00000015499	trub2	91	71.141	Takifugu_rubripes
ENSCVAG00000009901	trub2	87	70.548	ENSTNIG00000014721	trub2	100	70.548	Tetraodon_nigroviridis
ENSCVAG00000009901	trub2	66	46.154	ENSTBEG00000000586	TRUB2	95	46.154	Tupaia_belangeri
ENSCVAG00000009901	trub2	83	53.261	ENSTTRG00000016486	TRUB2	84	53.261	Tursiops_truncatus
ENSCVAG00000009901	trub2	98	48.936	ENSUAMG00000020276	TRUB2	94	48.936	Ursus_americanus
ENSCVAG00000009901	trub2	98	48.936	ENSUMAG00000022051	TRUB2	94	48.936	Ursus_maritimus
ENSCVAG00000009901	trub2	83	42.754	ENSVPAG00000005793	TRUB2	87	42.754	Vicugna_pacos
ENSCVAG00000009901	trub2	83	53.929	ENSVVUG00000013451	TRUB2	79	53.929	Vulpes_vulpes
ENSCVAG00000009901	trub2	97	49.691	ENSXETG00000003973	trub2	98	49.691	Xenopus_tropicalis
ENSCVAG00000009901	trub2	99	77.108	ENSXCOG00000008759	trub2	99	77.108	Xiphophorus_couchianus
ENSCVAG00000009901	trub2	99	76.807	ENSXMAG00000015478	trub2	99	76.807	Xiphophorus_maculatus