EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009912 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3578 bases
Position: chrKL653870.1:10637-14214
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008149	RVT_1	PF00078.27	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002103	-	3578	-	ENSCVAP00000008149	815 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000009912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009912	-	77	38.329	ENSCVAG00000020907	-	85	38.757
ENSCVAG00000009912	-	84	38.406	ENSCVAG00000020653	-	73	40.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009912	-	99	40.560	ENSAPOG00000012135	-	69	40.560	Acanthochromis_polyacanthus
ENSCVAG00000009912	-	99	39.360	ENSAPOG00000008045	-	82	39.360	Acanthochromis_polyacanthus
ENSCVAG00000009912	-	73	38.992	ENSACLG00000001563	-	57	38.992	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	39.805	ENSACLG00000026879	-	53	39.683	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	38.264	ENSACLG00000027730	-	69	38.509	Astatotilapia_calliptera
ENSCVAG00000009912	-	76	37.440	ENSACLG00000000367	-	67	37.621	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.441	ENSACLG00000024091	-	52	40.441	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.686	ENSACLG00000025719	-	52	40.686	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	58.313	ENSACLG00000013572	-	51	58.313	Astatotilapia_calliptera
ENSCVAG00000009912	-	63	38.447	ENSACLG00000005569	-	100	38.447	Astatotilapia_calliptera
ENSCVAG00000009912	-	70	37.824	ENSACLG00000014439	-	94	37.824	Astatotilapia_calliptera
ENSCVAG00000009912	-	100	59.829	ENSACLG00000018181	-	85	59.829	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.220	ENSACLG00000014619	-	54	40.220	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.098	ENSACLG00000007343	-	97	40.220	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.777	ENSACLG00000017161	-	52	40.876	Astatotilapia_calliptera
ENSCVAG00000009912	-	100	60.073	ENSACLG00000000499	-	51	60.073	Astatotilapia_calliptera
ENSCVAG00000009912	-	93	39.346	ENSACLG00000008862	-	99	39.346	Astatotilapia_calliptera
ENSCVAG00000009912	-	100	60.317	ENSACLG00000014870	-	51	60.317	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.441	ENSACLG00000009628	-	52	40.441	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	55.706	ENSACLG00000002180	-	54	55.706	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	40.220	ENSACLG00000019876	-	53	40.220	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	61.491	ENSACLG00000027291	-	52	61.642	Astatotilapia_calliptera
ENSCVAG00000009912	-	100	60.317	ENSACLG00000017808	-	51	60.317	Astatotilapia_calliptera
ENSCVAG00000009912	-	78	39.437	ENSACLG00000004062	-	83	39.437	Astatotilapia_calliptera
ENSCVAG00000009912	-	99	57.073	ENSAMXG00000038578	-	60	57.073	Astyanax_mexicanus
ENSCVAG00000009912	-	100	58.946	ENSAMXG00000031698	-	51	58.946	Astyanax_mexicanus
ENSCVAG00000009912	-	98	38.930	ENSAMXG00000038169	-	62	38.923	Astyanax_mexicanus
ENSCVAG00000009912	-	99	58.730	ENSAMXG00000040892	-	51	59.119	Astyanax_mexicanus
ENSCVAG00000009912	-	68	37.004	ENSAMXG00000037673	-	63	37.004	Astyanax_mexicanus
ENSCVAG00000009912	-	83	56.618	ENSAMXG00000043892	-	86	56.977	Astyanax_mexicanus
ENSCVAG00000009912	-	98	35.732	ENSAMXG00000030987	-	53	36.074	Astyanax_mexicanus
ENSCVAG00000009912	-	53	36.322	ENSCPBG00000002218	-	98	36.322	Chrysemys_picta_bellii
ENSCVAG00000009912	-	76	34.992	ENSCPBG00000008522	-	96	35.152	Chrysemys_picta_bellii
ENSCVAG00000009912	-	91	36.807	ENSCPBG00000011626	-	87	36.807	Chrysemys_picta_bellii
ENSCVAG00000009912	-	65	35.140	ENSCPBG00000001477	-	95	35.140	Chrysemys_picta_bellii
ENSCVAG00000009912	-	69	36.684	ENSCPBG00000024252	-	95	36.684	Chrysemys_picta_bellii
ENSCVAG00000009912	-	72	34.524	ENSCPBG00000003152	-	99	34.524	Chrysemys_picta_bellii
ENSCVAG00000009912	-	99	57.767	ENSELUG00000000948	-	69	57.767	Esox_lucius
ENSCVAG00000009912	-	56	39.186	ENSGAFG00000012710	-	99	39.186	Gambusia_affinis
ENSCVAG00000009912	-	94	39.304	ENSGAFG00000009062	-	98	39.221	Gambusia_affinis
ENSCVAG00000009912	-	82	38.336	ENSGAGG00000025282	-	56	38.336	Gopherus_agassizii
ENSCVAG00000009912	-	67	38.225	ENSGAGG00000014538	-	98	38.225	Gopherus_agassizii
ENSCVAG00000009912	-	99	39.216	ENSGAGG00000014450	-	71	39.093	Gopherus_agassizii
ENSCVAG00000009912	-	99	39.951	ENSGAGG00000022240	-	50	39.951	Gopherus_agassizii
ENSCVAG00000009912	-	99	40.098	ENSGAGG00000012039	-	96	40.098	Gopherus_agassizii
ENSCVAG00000009912	-	99	40.098	ENSGAGG00000020521	-	96	40.098	Gopherus_agassizii
ENSCVAG00000009912	-	98	35.990	ENSIPUG00000000601	-	87	36.196	Ictalurus_punctatus
ENSCVAG00000009912	-	96	57.360	ENSMAMG00000018393	-	72	57.360	Mastacembelus_armatus
ENSCVAG00000009912	-	100	59.829	ENSMZEG00005000633	-	76	59.829	Maylandia_zebra
ENSCVAG00000009912	-	84	37.176	ENSMALG00000019305	-	100	37.176	Monopterus_albus
ENSCVAG00000009912	-	99	57.055	ENSORLG00000026629	-	52	56.933	Oryzias_latipes
ENSCVAG00000009912	-	66	38.235	ENSORLG00000029791	-	74	38.235	Oryzias_latipes
ENSCVAG00000009912	-	99	40.564	ENSORLG00000026546	-	53	40.564	Oryzias_latipes
ENSCVAG00000009912	-	99	40.441	ENSORLG00000024233	-	53	40.441	Oryzias_latipes
ENSCVAG00000009912	-	99	41.098	ENSORLG00000025739	-	52	41.119	Oryzias_latipes
ENSCVAG00000009912	-	99	56.127	ENSORLG00000029874	-	51	56.127	Oryzias_latipes
ENSCVAG00000009912	-	95	40.409	ENSORLG00000025478	-	97	40.409	Oryzias_latipes
ENSCVAG00000009912	-	99	57.178	ENSORLG00000023181	-	52	57.055	Oryzias_latipes
ENSCVAG00000009912	-	99	40.781	ENSORLG00000030542	-	53	40.781	Oryzias_latipes
ENSCVAG00000009912	-	99	40.781	ENSORLG00000028609	-	53	40.781	Oryzias_latipes
ENSCVAG00000009912	-	99	40.564	ENSORLG00000026665	-	53	40.564	Oryzias_latipes
ENSCVAG00000009912	-	99	41.119	ENSORLG00000030265	-	52	41.119	Oryzias_latipes
ENSCVAG00000009912	-	99	41.119	ENSORLG00000027568	-	52	41.119	Oryzias_latipes
ENSCVAG00000009912	-	99	56.495	ENSORLG00000029675	-	51	56.495	Oryzias_latipes
ENSCVAG00000009912	-	99	41.119	ENSORLG00000024220	-	52	41.119	Oryzias_latipes
ENSCVAG00000009912	-	99	40.904	ENSORLG00000028795	-	53	40.904	Oryzias_latipes
ENSCVAG00000009912	-	99	38.902	ENSORLG00000024904	-	53	38.902	Oryzias_latipes
ENSCVAG00000009912	-	99	57.301	ENSORLG00000026676	-	84	57.178	Oryzias_latipes
ENSCVAG00000009912	-	98	62.360	ENSORLG00000028632	-	74	62.236	Oryzias_latipes
ENSCVAG00000009912	-	99	57.423	ENSORLG00000026873	-	52	57.301	Oryzias_latipes
ENSCVAG00000009912	-	99	38.142	ENSORLG00000027831	-	53	38.142	Oryzias_latipes
ENSCVAG00000009912	-	99	39.024	ENSORLG00020014203	-	52	39.024	Oryzias_latipes_hni
ENSCVAG00000009912	-	99	39.024	ENSORLG00020003869	-	52	39.024	Oryzias_latipes_hni
ENSCVAG00000009912	-	98	38.433	ENSORLG00020020268	-	52	38.433	Oryzias_latipes_hni
ENSCVAG00000009912	-	99	41.119	ENSORLG00020008293	-	52	41.119	Oryzias_latipes_hni
ENSCVAG00000009912	-	73	39.934	ENSORLG00020002554	-	91	39.934	Oryzias_latipes_hni
ENSCVAG00000009912	-	99	39.560	ENSORLG00020001422	-	53	39.560	Oryzias_latipes_hni
ENSCVAG00000009912	-	99	41.026	ENSORLG00015017778	-	53	41.026	Oryzias_latipes_hsok
ENSCVAG00000009912	-	99	41.148	ENSORLG00015018878	-	53	41.148	Oryzias_latipes_hsok
ENSCVAG00000009912	-	99	55.951	ENSOMEG00000009987	-	53	55.951	Oryzias_melastigma
ENSCVAG00000009912	-	99	41.169	ENSOMEG00000003712	-	53	41.169	Oryzias_melastigma
ENSCVAG00000009912	-	79	52.558	ENSOMEG00000006705	-	87	52.558	Oryzias_melastigma
ENSCVAG00000009912	-	80	52.833	ENSPKIG00000000391	-	94	52.833	Paramormyrops_kingsleyae
ENSCVAG00000009912	-	99	37.485	ENSPSIG00000000353	-	68	37.363	Pelodiscus_sinensis
ENSCVAG00000009912	-	99	38.631	ENSPSIG00000000489	-	54	38.386	Pelodiscus_sinensis
ENSCVAG00000009912	-	99	38.246	ENSPSIG00000001658	-	91	38.124	Pelodiscus_sinensis
ENSCVAG00000009912	-	99	37.531	ENSPSIG00000000767	-	57	37.408	Pelodiscus_sinensis
ENSCVAG00000009912	-	96	36.061	ENSPSIG00000013781	-	100	35.806	Pelodiscus_sinensis
ENSCVAG00000009912	-	97	39.850	ENSPSIG00000000994	-	55	39.724	Pelodiscus_sinensis
ENSCVAG00000009912	-	77	51.746	ENSPMEG00000020606	-	100	51.746	Poecilia_mexicana
ENSCVAG00000009912	-	99	39.435	ENSPMEG00000019585	-	99	39.189	Poecilia_mexicana
ENSCVAG00000009912	-	98	38.308	ENSPMEG00000016355	-	63	38.107	Poecilia_mexicana
ENSCVAG00000009912	-	99	65.892	ENSPREG00000000390	-	52	65.892	Poecilia_reticulata
ENSCVAG00000009912	-	99	86.978	ENSPREG00000004954	-	53	87.255	Poecilia_reticulata
ENSCVAG00000009912	-	99	39.194	ENSSDUG00000002460	-	63	39.072	Seriola_dumerili
ENSCVAG00000009912	-	72	52.479	ENSTNIG00000001462	-	99	52.479	Tetraodon_nigroviridis
ENSCVAG00000009912	-	100	59.046	ENSXMAG00000021298	-	51	59.046	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	54.034	ENSXMAG00000021213	-	53	53.912	Xiphophorus_maculatus
ENSCVAG00000009912	-	100	58.802	ENSXMAG00000023319	-	51	58.802	Xiphophorus_maculatus
ENSCVAG00000009912	-	89	38.957	ENSXMAG00000030100	-	51	38.957	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	53.912	ENSXMAG00000026594	-	53	53.790	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	39.045	ENSXMAG00000026031	-	53	39.045	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	53.912	ENSXMAG00000030089	-	76	53.790	Xiphophorus_maculatus
ENSCVAG00000009912	-	62	38.356	ENSXMAG00000025770	-	100	38.356	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	52.387	ENSXMAG00000023503	-	53	52.142	Xiphophorus_maculatus
ENSCVAG00000009912	-	99	52.387	ENSXMAG00000023079	-	53	52.142	Xiphophorus_maculatus