EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009961 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1808 bases
Position: chrKL653761.1:82481-84288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008191	RVT_1	PF00078.27	1.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002027	-	1808	-	ENSCVAP00000008191	509 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000009961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009961	-	54	37.956	ENSCVAG00000000484	-	93	37.956
ENSCVAG00000009961	-	67	33.333	ENSCVAG00000007707	-	50	33.333
ENSCVAG00000009961	-	56	51.228	ENSCVAG00000018360	-	69	51.228
ENSCVAG00000009961	-	67	40.643	ENSCVAG00000020933	-	76	40.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009961	-	86	36.986	ENSAPEG00000013789	-	59	36.986	Amphiprion_percula
ENSCVAG00000009961	-	78	36.816	ENSAPEG00000021324	-	94	36.816	Amphiprion_percula
ENSCVAG00000009961	-	55	44.245	ENSACLG00000025726	-	58	44.245	Astatotilapia_calliptera
ENSCVAG00000009961	-	81	43.902	ENSACLG00000005315	-	90	43.902	Astatotilapia_calliptera
ENSCVAG00000009961	-	58	41.695	ENSACLG00000025717	-	88	41.695	Astatotilapia_calliptera
ENSCVAG00000009961	-	83	42.755	ENSACLG00000019432	-	93	42.755	Astatotilapia_calliptera
ENSCVAG00000009961	-	81	40.633	ENSFHEG00000014931	-	72	40.633	Fundulus_heteroclitus
ENSCVAG00000009961	-	64	31.515	ENSFHEG00000006003	-	72	31.515	Fundulus_heteroclitus
ENSCVAG00000009961	-	77	39.043	ENSHBUG00000015481	-	99	39.043	Haplochromis_burtoni
ENSCVAG00000009961	-	70	35.493	ENSKMAG00000014672	-	70	35.493	Kryptolebias_marmoratus
ENSCVAG00000009961	-	75	43.570	ENSLBEG00000012683	-	96	43.570	Labrus_bergylta
ENSCVAG00000009961	-	57	32.323	ENSLBEG00000023571	-	86	32.323	Labrus_bergylta
ENSCVAG00000009961	-	50	41.732	ENSLBEG00000022922	-	88	40.809	Labrus_bergylta
ENSCVAG00000009961	-	54	41.304	ENSLBEG00000015744	-	99	41.304	Labrus_bergylta
ENSCVAG00000009961	-	71	34.254	ENSLBEG00000015833	-	89	34.254	Labrus_bergylta
ENSCVAG00000009961	-	59	46.026	ENSMZEG00005014401	-	85	46.026	Maylandia_zebra
ENSCVAG00000009961	-	56	43.463	ENSMMOG00000014893	-	97	43.463	Mola_mola
ENSCVAG00000009961	-	55	43.060	ENSMALG00000013064	-	63	43.060	Monopterus_albus
ENSCVAG00000009961	-	54	36.691	ENSONIG00000020621	-	83	36.691	Oreochromis_niloticus
ENSCVAG00000009961	-	62	34.906	ENSORLG00000028717	-	70	34.906	Oryzias_latipes
ENSCVAG00000009961	-	54	32.000	ENSORLG00000027739	-	89	30.479	Oryzias_latipes
ENSCVAG00000009961	-	83	43.262	ENSORLG00000022016	-	78	43.262	Oryzias_latipes
ENSCVAG00000009961	-	79	37.037	ENSORLG00020017190	-	94	37.037	Oryzias_latipes_hni
ENSCVAG00000009961	-	87	38.444	ENSORLG00020005447	-	77	38.444	Oryzias_latipes_hni
ENSCVAG00000009961	-	68	33.903	ENSORLG00015013361	-	90	33.903	Oryzias_latipes_hsok
ENSCVAG00000009961	-	70	40.730	ENSPKIG00000025567	-	81	40.730	Paramormyrops_kingsleyae
ENSCVAG00000009961	-	77	39.747	ENSPKIG00000013191	-	84	39.747	Paramormyrops_kingsleyae
ENSCVAG00000009961	-	71	37.127	ENSPKIG00000004060	-	85	37.127	Paramormyrops_kingsleyae
ENSCVAG00000009961	-	68	34.097	ENSPFOG00000024190	-	75	34.097	Poecilia_formosa
ENSCVAG00000009961	-	67	35.988	ENSPFOG00000024165	-	88	34.474	Poecilia_formosa
ENSCVAG00000009961	-	55	32.740	ENSPMEG00000016120	-	97	32.740	Poecilia_mexicana
ENSCVAG00000009961	-	55	35.816	ENSPREG00000005467	-	83	35.816	Poecilia_reticulata
ENSCVAG00000009961	-	91	39.535	ENSPNYG00000005142	-	99	39.535	Pundamilia_nyererei
ENSCVAG00000009961	-	83	34.752	ENSPNAG00000027547	-	77	34.752	Pygocentrus_nattereri
ENSCVAG00000009961	-	94	33.264	ENSXETG00000034336	-	60	33.264	Xenopus_tropicalis
ENSCVAG00000009961	-	94	36.458	ENSXETG00000031859	-	50	36.458	Xenopus_tropicalis
ENSCVAG00000009961	-	95	36.646	ENSXETG00000033831	-	54	36.646	Xenopus_tropicalis
ENSCVAG00000009961	-	52	31.618	ENSXCOG00000007285	-	85	31.618	Xiphophorus_couchianus
ENSCVAG00000009961	-	57	41.379	ENSXMAG00000025990	-	77	41.379	Xiphophorus_maculatus