EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000009972 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: zgc:56699
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9989 bases
Position: chrKL652728.1:812010-821998
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008185	zf-U11-48K	PF05253.12	3.4e-18	1	2
ENSCVAP00000008185	zf-U11-48K	PF05253.12	3.4e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002035	-	531	-	ENSCVAP00000008185	176 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000009972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009972	zgc:56699	74	65.649	ENSAPOG00000000311	-	80	65.649	Acanthochromis_polyacanthus
ENSCVAG00000009972	zgc:56699	79	50.331	ENSAPOG00000021951	-	85	50.331	Acanthochromis_polyacanthus
ENSCVAG00000009972	zgc:56699	77	58.503	ENSACIG00000013400	zgc:56699	84	58.503	Amphilophus_citrinellus
ENSCVAG00000009972	zgc:56699	85	51.250	ENSAOCG00000013650	-	89	51.250	Amphiprion_ocellaris
ENSCVAG00000009972	zgc:56699	85	45.033	ENSAPEG00000006689	zgc:56699	86	45.033	Amphiprion_percula
ENSCVAG00000009972	zgc:56699	75	63.889	ENSATEG00000024058	zgc:56699	80	63.889	Anabas_testudineus
ENSCVAG00000009972	zgc:56699	75	56.463	ENSACLG00000023562	zgc:56699	75	56.463	Astatotilapia_calliptera
ENSCVAG00000009972	zgc:56699	51	59.140	ENSAMXG00000036095	-	62	46.309	Astyanax_mexicanus
ENSCVAG00000009972	zgc:56699	74	49.660	ENSAMXG00000038346	zgc:56699	81	49.660	Astyanax_mexicanus
ENSCVAG00000009972	zgc:56699	74	61.268	ENSCSEG00000021520	zgc:56699	68	61.268	Cynoglossus_semilaevis
ENSCVAG00000009972	zgc:56699	88	38.596	ENSDARG00000099586	CR382383.2	96	38.596	Danio_rerio
ENSCVAG00000009972	zgc:56699	74	48.966	ENSDARG00000000887	zgc:56699	80	48.966	Danio_rerio
ENSCVAG00000009972	zgc:56699	55	41.000	ENSEBUG00000005577	-	54	41.000	Eptatretus_burgeri
ENSCVAG00000009972	zgc:56699	75	51.799	ENSELUG00000003242	gtsf1	85	51.799	Esox_lucius
ENSCVAG00000009972	zgc:56699	74	62.500	ENSFHEG00000006036	zgc:56699	76	56.489	Fundulus_heteroclitus
ENSCVAG00000009972	zgc:56699	76	47.368	ENSGMOG00000007295	zgc:56699	98	47.368	Gadus_morhua
ENSCVAG00000009972	zgc:56699	55	41.748	ENSGALG00000035365	-	58	41.748	Gallus_gallus
ENSCVAG00000009972	zgc:56699	74	65.734	ENSGAFG00000020743	zgc:56699	80	65.734	Gambusia_affinis
ENSCVAG00000009972	zgc:56699	75	56.463	ENSHBUG00000005327	zgc:56699	82	56.463	Haplochromis_burtoni
ENSCVAG00000009972	zgc:56699	74	48.592	ENSHCOG00000010296	-	82	48.592	Hippocampus_comes
ENSCVAG00000009972	zgc:56699	76	46.622	ENSIPUG00000011498	zgc:56699	79	46.622	Ictalurus_punctatus
ENSCVAG00000009972	zgc:56699	74	61.538	ENSLBEG00000015981	zgc:56699	79	53.077	Labrus_bergylta
ENSCVAG00000009972	zgc:56699	74	43.357	ENSLOCG00000004469	zgc:56699	99	44.828	Lepisosteus_oculatus
ENSCVAG00000009972	zgc:56699	75	55.172	ENSMAMG00000001846	zgc:56699	82	55.172	Mastacembelus_armatus
ENSCVAG00000009972	zgc:56699	75	56.463	ENSMZEG00005026479	zgc:56699	75	56.463	Maylandia_zebra
ENSCVAG00000009972	zgc:56699	81	52.703	ENSMMOG00000017331	zgc:56699	81	52.703	Mola_mola
ENSCVAG00000009972	zgc:56699	83	53.659	ENSNBRG00000006336	zgc:56699	91	53.659	Neolamprologus_brichardi
ENSCVAG00000009972	zgc:56699	75	56.463	ENSONIG00000016720	zgc:56699	75	56.463	Oreochromis_niloticus
ENSCVAG00000009972	zgc:56699	77	49.650	ENSORLG00000015258	-	83	49.650	Oryzias_latipes
ENSCVAG00000009972	zgc:56699	56	60.396	ENSORLG00000025877	-	62	60.396	Oryzias_latipes
ENSCVAG00000009972	zgc:56699	56	60.396	ENSORLG00020011013	-	62	60.396	Oryzias_latipes_hni
ENSCVAG00000009972	zgc:56699	77	50.350	ENSORLG00020010990	-	83	50.350	Oryzias_latipes_hni
ENSCVAG00000009972	zgc:56699	77	51.049	ENSORLG00015004961	zgc:56699	83	51.049	Oryzias_latipes_hsok
ENSCVAG00000009972	zgc:56699	76	48.571	ENSOMEG00000021739	-	82	48.571	Oryzias_melastigma
ENSCVAG00000009972	zgc:56699	60	53.636	ENSOMEG00000013200	-	73	53.636	Oryzias_melastigma
ENSCVAG00000009972	zgc:56699	76	53.103	ENSOMEG00000021773	-	81	53.103	Oryzias_melastigma
ENSCVAG00000009972	zgc:56699	74	48.649	ENSPKIG00000017039	zgc:56699	82	48.649	Paramormyrops_kingsleyae
ENSCVAG00000009972	zgc:56699	76	65.468	ENSPMGG00000023241	zgc:56699	80	65.468	Periophthalmus_magnuspinnatus
ENSCVAG00000009972	zgc:56699	55	41.905	ENSPMAG00000009653	-	81	41.905	Petromyzon_marinus
ENSCVAG00000009972	zgc:56699	74	64.336	ENSPFOG00000009204	zgc:56699	80	64.336	Poecilia_formosa
ENSCVAG00000009972	zgc:56699	74	68.889	ENSPLAG00000009088	zgc:56699	78	68.889	Poecilia_latipinna
ENSCVAG00000009972	zgc:56699	74	64.336	ENSPMEG00000001443	zgc:56699	80	64.336	Poecilia_mexicana
ENSCVAG00000009972	zgc:56699	74	66.434	ENSPREG00000000745	zgc:56699	80	66.434	Poecilia_reticulata
ENSCVAG00000009972	zgc:56699	75	56.463	ENSPNYG00000002811	zgc:56699	82	56.463	Pundamilia_nyererei
ENSCVAG00000009972	zgc:56699	74	52.740	ENSPNAG00000005165	zgc:56699	81	52.740	Pygocentrus_nattereri
ENSCVAG00000009972	zgc:56699	76	47.260	ENSSFOG00015021600	zgc:56699	82	47.260	Scleropages_formosus
ENSCVAG00000009972	zgc:56699	83	56.774	ENSSMAG00000020886	zgc:56699	90	56.774	Scophthalmus_maximus
ENSCVAG00000009972	zgc:56699	78	62.000	ENSSDUG00000002033	zgc:56699	83	62.000	Seriola_dumerili
ENSCVAG00000009972	zgc:56699	78	61.333	ENSSLDG00000014113	zgc:56699	83	61.333	Seriola_lalandi_dorsalis
ENSCVAG00000009972	zgc:56699	69	54.331	ENSSPAG00000010005	-	79	54.331	Stegastes_partitus
ENSCVAG00000009972	zgc:56699	73	61.029	ENSSPAG00000019854	-	80	61.029	Stegastes_partitus
ENSCVAG00000009972	zgc:56699	75	52.778	ENSTRUG00000015537	zgc:56699	81	52.778	Takifugu_rubripes
ENSCVAG00000009972	zgc:56699	56	59.406	ENSTNIG00000012515	zgc:56699	73	56.667	Tetraodon_nigroviridis
ENSCVAG00000009972	zgc:56699	74	70.677	ENSXCOG00000014400	zgc:56699	70	70.677	Xiphophorus_couchianus
ENSCVAG00000009972	zgc:56699	80	62.420	ENSXMAG00000011692	zgc:56699	88	62.420	Xiphophorus_maculatus