EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000009980 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14521 bases
Position: chrKL653329.1:265068-279588
Accession: 107098987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025310	KH_1	PF00013.29	1.1e-13	1	1
ENSCVAP00000025310	DEAD	PF00270.29	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002039	-	1845	XM_015396903	ENSCVAP00000025310	614 (aa)	XP_015252389	-

Gene Model

Click here to download ENSCVAG00000009980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000009980	ddx43	60	41.523	ENSCVAG00000010921	si:dkey-156n14.5	61	41.032
ENSCVAG00000009980	ddx43	60	41.523	ENSCVAG00000018093	ddx5	80	41.523
ENSCVAG00000009980	ddx43	50	30.372	ENSCVAG00000007477	DDX39A	79	30.372
ENSCVAG00000009980	ddx43	55	32.361	ENSCVAG00000014462	DDX41	57	32.361
ENSCVAG00000009980	ddx43	53	39.257	ENSCVAG00000011003	-	53	39.257
ENSCVAG00000009980	ddx43	56	35.854	ENSCVAG00000015745	ddx23	54	36.165
ENSCVAG00000009980	ddx43	50	30.110	ENSCVAG00000006635	ddx55	60	30.663
ENSCVAG00000009980	ddx43	51	30.595	ENSCVAG00000006864	eif4a3	84	30.595
ENSCVAG00000009980	ddx43	60	41.892	ENSCVAG00000015378	-	59	41.892
ENSCVAG00000009980	ddx43	50	39.178	ENSCVAG00000001784	-	54	40.115
ENSCVAG00000009980	ddx43	59	31.095	ENSCVAG00000012835	ddx59	62	31.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000009980	ddx43	93	64.448	ENSAPOG00000001712	ddx43	85	64.448	Acanthochromis_polyacanthus
ENSCVAG00000009980	ddx43	93	53.477	ENSACIG00000012170	ddx43	93	63.582	Amphilophus_citrinellus
ENSCVAG00000009980	ddx43	93	68.241	ENSAOCG00000001331	ddx43	85	68.404	Amphiprion_ocellaris
ENSCVAG00000009980	ddx43	93	68.750	ENSAPEG00000001133	ddx43	93	68.831	Amphiprion_percula
ENSCVAG00000009980	ddx43	93	68.212	ENSATEG00000012664	ddx43	87	68.212	Anabas_testudineus
ENSCVAG00000009980	ddx43	75	57.540	ENSAPLG00000010182	-	86	61.871	Anas_platyrhynchos
ENSCVAG00000009980	ddx43	78	58.494	ENSACAG00000004387	-	86	55.773	Anolis_carolinensis
ENSCVAG00000009980	ddx43	93	66.287	ENSACLG00000026081	ddx43	89	66.287	Astatotilapia_calliptera
ENSCVAG00000009980	ddx43	93	61.383	ENSAMXG00000004457	ddx43	95	62.226	Astyanax_mexicanus
ENSCVAG00000009980	ddx43	65	45.125	WBGene00013214	Y54G11A.3	87	45.125	Caenorhabditis_elegans
ENSCVAG00000009980	ddx43	65	62.843	ENSCSEG00000000532	ddx43	98	62.843	Cynoglossus_semilaevis
ENSCVAG00000009980	ddx43	93	59.554	ENSDARG00000022614	ddx43	99	55.422	Danio_rerio
ENSCVAG00000009980	ddx43	87	43.193	FBgn0037549	CG7878	82	43.193	Drosophila_melanogaster
ENSCVAG00000009980	ddx43	71	41.970	ENSETEG00000014626	-	87	41.970	Echinops_telfairi
ENSCVAG00000009980	ddx43	54	39.806	ENSETEG00000019547	-	59	39.806	Echinops_telfairi
ENSCVAG00000009980	ddx43	93	60.427	ENSELUG00000012126	ddx43	88	60.427	Esox_lucius
ENSCVAG00000009980	ddx43	80	56.929	ENSFALG00000007042	-	84	54.833	Ficedula_albicollis
ENSCVAG00000009980	ddx43	68	73.134	ENSFHEG00000011226	ddx43	85	73.134	Fundulus_heteroclitus
ENSCVAG00000009980	ddx43	62	67.146	ENSGMOG00000004178	ddx43	90	67.146	Gadus_morhua
ENSCVAG00000009980	ddx43	55	63.369	ENSGALG00000015928	-	85	63.369	Gallus_gallus
ENSCVAG00000009980	ddx43	93	69.502	ENSGAFG00000012622	ddx43	88	69.502	Gambusia_affinis
ENSCVAG00000009980	ddx43	78	72.798	ENSGACG00000012072	ddx43	88	72.798	Gasterosteus_aculeatus
ENSCVAG00000009980	ddx43	84	53.176	ENSGAGG00000025230	-	79	53.176	Gopherus_agassizii
ENSCVAG00000009980	ddx43	93	66.287	ENSHBUG00000011653	ddx43	89	66.287	Haplochromis_burtoni
ENSCVAG00000009980	ddx43	93	59.157	ENSHCOG00000014704	ddx43	88	59.091	Hippocampus_comes
ENSCVAG00000009980	ddx43	97	60.960	ENSIPUG00000023423	ddx43	92	60.952	Ictalurus_punctatus
ENSCVAG00000009980	ddx43	93	67.690	ENSKMAG00000016167	ddx43	88	67.690	Kryptolebias_marmoratus
ENSCVAG00000009980	ddx43	93	66.013	ENSLBEG00000007913	ddx43	95	65.714	Labrus_bergylta
ENSCVAG00000009980	ddx43	71	59.627	ENSLACG00000000741	ddx43	99	59.627	Latimeria_chalumnae
ENSCVAG00000009980	ddx43	84	59.278	ENSLOCG00000016170	ddx43	86	59.278	Lepisosteus_oculatus
ENSCVAG00000009980	ddx43	93	60.359	ENSMAMG00000022128	ddx43	88	60.359	Mastacembelus_armatus
ENSCVAG00000009980	ddx43	93	66.287	ENSMZEG00005027349	ddx43	89	66.287	Maylandia_zebra
ENSCVAG00000009980	ddx43	78	58.949	ENSMGAG00000013832	-	88	58.949	Meleagris_gallopavo
ENSCVAG00000009980	ddx43	93	65.232	ENSMMOG00000007346	ddx43	87	65.232	Mola_mola
ENSCVAG00000009980	ddx43	78	51.072	ENSMODG00000014335	-	87	51.072	Monodelphis_domestica
ENSCVAG00000009980	ddx43	81	53.259	ENSMODG00000018546	-	79	54.175	Monodelphis_domestica
ENSCVAG00000009980	ddx43	93	65.440	ENSMALG00000020673	ddx43	88	65.440	Monopterus_albus
ENSCVAG00000009980	ddx43	93	67.769	ENSNBRG00000010942	ddx43	96	67.792	Neolamprologus_brichardi
ENSCVAG00000009980	ddx43	93	66.287	ENSONIG00000001195	ddx43	90	65.837	Oreochromis_niloticus
ENSCVAG00000009980	ddx43	58	63.231	ENSOANG00000006467	-	93	63.231	Ornithorhynchus_anatinus
ENSCVAG00000009980	ddx43	82	68.488	ENSORLG00000002267	ddx43	84	68.488	Oryzias_latipes
ENSCVAG00000009980	ddx43	81	69.017	ENSORLG00020018592	ddx43	83	69.017	Oryzias_latipes_hni
ENSCVAG00000009980	ddx43	82	68.124	ENSORLG00015004854	ddx43	84	68.124	Oryzias_latipes_hsok
ENSCVAG00000009980	ddx43	83	66.847	ENSOMEG00000023418	ddx43	85	66.847	Oryzias_melastigma
ENSCVAG00000009980	ddx43	93	57.143	ENSPKIG00000002941	ddx43	87	57.143	Paramormyrops_kingsleyae
ENSCVAG00000009980	ddx43	80	56.827	ENSPSIG00000002202	-	85	56.827	Pelodiscus_sinensis
ENSCVAG00000009980	ddx43	61	62.667	ENSPMGG00000019854	ddx43	91	62.730	Periophthalmus_magnuspinnatus
ENSCVAG00000009980	ddx43	78	52.058	ENSPCIG00000002492	-	82	52.058	Phascolarctos_cinereus
ENSCVAG00000009980	ddx43	56	61.067	ENSPCIG00000017981	-	85	61.067	Phascolarctos_cinereus
ENSCVAG00000009980	ddx43	93	70.921	ENSPFOG00000004241	ddx43	88	70.921	Poecilia_formosa
ENSCVAG00000009980	ddx43	93	71.082	ENSPLAG00000023362	ddx43	88	71.082	Poecilia_latipinna
ENSCVAG00000009980	ddx43	93	70.759	ENSPMEG00000004870	ddx43	88	70.759	Poecilia_mexicana
ENSCVAG00000009980	ddx43	93	64.132	ENSPREG00000000923	ddx43	88	64.132	Poecilia_reticulata
ENSCVAG00000009980	ddx43	93	66.837	ENSPNYG00000009064	ddx43	88	66.837	Pundamilia_nyererei
ENSCVAG00000009980	ddx43	93	60.193	ENSPNAG00000001232	ddx43	85	60.543	Pygocentrus_nattereri
ENSCVAG00000009980	ddx43	80	50.568	ENSSHAG00000016933	-	90	50.568	Sarcophilus_harrisii
ENSCVAG00000009980	ddx43	78	53.981	ENSSHAG00000001847	-	84	52.468	Sarcophilus_harrisii
ENSCVAG00000009980	ddx43	75	62.325	ENSSFOG00015012193	ddx43	78	62.325	Scleropages_formosus
ENSCVAG00000009980	ddx43	93	66.303	ENSSMAG00000019288	ddx43	88	66.303	Scophthalmus_maximus
ENSCVAG00000009980	ddx43	93	68.320	ENSSDUG00000020120	ddx43	87	68.480	Seriola_dumerili
ENSCVAG00000009980	ddx43	93	66.395	ENSSLDG00000017225	ddx43	86	66.395	Seriola_lalandi_dorsalis
ENSCVAG00000009980	ddx43	63	53.571	ENSSPUG00000018097	-	86	52.857	Sphenodon_punctatus
ENSCVAG00000009980	ddx43	93	68.760	ENSSPAG00000006858	ddx43	99	65.810	Stegastes_partitus
ENSCVAG00000009980	ddx43	79	56.405	ENSTGUG00000012684	-	88	56.405	Taeniopygia_guttata
ENSCVAG00000009980	ddx43	93	57.120	ENSTRUG00000012795	ddx43	89	57.120	Takifugu_rubripes
ENSCVAG00000009980	ddx43	78	66.602	ENSTNIG00000009822	ddx43	89	66.409	Tetraodon_nigroviridis
ENSCVAG00000009980	ddx43	93	53.289	ENSXETG00000011767	ddx43	90	53.289	Xenopus_tropicalis
ENSCVAG00000009980	ddx43	93	65.894	ENSXCOG00000013810	ddx43	88	65.894	Xiphophorus_couchianus
ENSCVAG00000009980	ddx43	93	68.810	ENSXMAG00000017126	ddx43	88	68.810	Xiphophorus_maculatus