EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCVAG00000009985 (Gene tree)
Gene ID
107090457
Gene Symbol
frg1
Alias
zgc:112426
Full Name
FSHD region gene 1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
15869 bases
Position
chrKL652796.1:183543-199411
Accession
107090457
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000008186FRG1PF06229.125.6e-8211
ENSCVAP00000008189FRG1PF06229.127.6e-8211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000002034-738-ENSCVAP00000008186245 (aa)--
ENSCVAT00000002025-1558XM_015383843ENSCVAP00000008189255 (aa)XP_015239329UPI0007428753
Gene Model
Click here to download ENSCVAG00000009985's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000009985's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000009985frg110070.155ENSG00000109536FRG110079.310Homo_sapiens
ENSCVAG00000009985frg110086.275ENSAPOG00000001060frg110086.275Acanthochromis_polyacanthus
ENSCVAG00000009985frg110070.155ENSAMEG00000013503FRG110069.380Ailuropoda_melanoleuca
ENSCVAG00000009985frg18789.252ENSACIG00000022283frg110087.838Amphilophus_citrinellus
ENSCVAG00000009985frg18788.785ENSAOCG00000024240frg18786.937Amphiprion_ocellaris
ENSCVAG00000009985frg110086.275ENSAPEG00000002486frg110086.275Amphiprion_percula
ENSCVAG00000009985frg110084.314ENSATEG00000010414frg110087.059Anabas_testudineus
ENSCVAG00000009985frg110072.656ENSAPLG00000007785-10072.656Anas_platyrhynchos
ENSCVAG00000009985frg110073.438ENSACAG00000006877-10073.828Anolis_carolinensis
ENSCVAG00000009985frg110071.595ENSANAG00000020876FRG110071.595Aotus_nancymaae
ENSCVAG00000009985frg110084.898ENSACLG00000027065frg110084.898Astatotilapia_calliptera
ENSCVAG00000009985frg110081.250ENSAMXG00000032700frg110081.250Astyanax_mexicanus
ENSCVAG00000009985frg110070.155ENSBTAG00000007089FRG110069.380Bos_taurus
ENSCVAG00000009985frg19941.026WBGene00014177frg-19941.176Caenorhabditis_elegans
ENSCVAG00000009985frg110071.595ENSCJAG00000011272FRG110071.595Callithrix_jacchus
ENSCVAG00000009985frg110070.155ENSCAFG00000007135FRG110069.380Canis_familiaris
ENSCVAG00000009985frg18675.000ENSCAFG00020000082-8575.000Canis_lupus_dingo
ENSCVAG00000009985frg110070.155ENSCHIG00000011585-10069.380Capra_hircus
ENSCVAG00000009985frg19851.587ENSTSYG00000031599-10051.190Carlito_syrichta
ENSCVAG00000009985frg18773.953ENSCAPG00000016056-9372.687Cavia_aperea
ENSCVAG00000009985frg110071.984ENSCPOG00000022277-10071.984Cavia_porcellus
ENSCVAG00000009985frg110071.595ENSCCAG00000024627FRG110071.595Cebus_capucinus
ENSCVAG00000009985frg110069.767ENSCATG00000029230FRG110069.767Cercocebus_atys
ENSCVAG00000009985frg110058.527ENSCLAG00000004960-10059.302Chinchilla_lanigera
ENSCVAG00000009985frg19949.802ENSCLAG00000009263-10049.802Chinchilla_lanigera
ENSCVAG00000009985frg110071.984ENSCLAG00000000370-10071.984Chinchilla_lanigera
ENSCVAG00000009985frg110051.765ENSCLAG00000006068-10052.157Chinchilla_lanigera
ENSCVAG00000009985frg110069.767ENSCSAG00000002899FRG110069.767Chlorocebus_sabaeus
ENSCVAG00000009985frg18771.163ENSCSAG00000017729-10070.370Chlorocebus_sabaeus
ENSCVAG00000009985frg18775.234ENSCPBG00000009211-8674.775Chrysemys_picta_bellii
ENSCVAG00000009985frg19947.191ENSCING00000005161-9947.191Ciona_intestinalis
ENSCVAG00000009985frg15454.887ENSCSAVG00000008018-10048.087Ciona_savignyi
ENSCVAG00000009985frg110069.767ENSCANG00000020991FRG110069.767Colobus_angolensis_palliatus
ENSCVAG00000009985frg110071.318ENSCGRG00001014998Frg110070.543Cricetulus_griseus_chok1gshd
ENSCVAG00000009985frg110071.318ENSCGRG00000011860-10070.543Cricetulus_griseus_crigri
ENSCVAG00000009985frg110058.366ENSCGRG00000003902-9658.366Cricetulus_griseus_crigri
ENSCVAG00000009985frg19681.557ENSCSEG00000015950frg110081.557Cynoglossus_semilaevis
ENSCVAG00000009985frg110082.353ENSDARG00000056504frg110084.507Danio_rerio
ENSCVAG00000009985frg110070.543ENSDNOG00000014886FRG110070.543Dasypus_novemcinctus
ENSCVAG00000009985frg110061.628ENSDORG00000016190Frg110061.628Dipodomys_ordii
ENSCVAG00000009985frg110049.621FBgn0036964FRG110049.049Drosophila_melanogaster
ENSCVAG00000009985frg110070.155ENSETEG00000012349-10069.380Echinops_telfairi
ENSCVAG00000009985frg16052.027ENSEBUG00000012359FRG18952.027Eptatretus_burgeri
ENSCVAG00000009985frg110071.595ENSEASG00005017497FRG110071.595Equus_asinus_asinus
ENSCVAG00000009985frg110071.595ENSECAG00000003122FRG110071.595Equus_caballus
ENSCVAG00000009985frg16477.070ENSEEUG00000000145-10077.070Erinaceus_europaeus
ENSCVAG00000009985frg110079.216ENSELUG00000021712frg110079.216Esox_lucius
ENSCVAG00000009985frg110070.155ENSFCAG00000025737FRG110069.380Felis_catus
ENSCVAG00000009985frg18773.832ENSFALG00000011231-9170.563Ficedula_albicollis
ENSCVAG00000009985frg110060.769ENSFDAG00000012697-9865.888Fukomys_damarensis
ENSCVAG00000009985frg110071.595ENSFDAG00000000962-10070.817Fukomys_damarensis
ENSCVAG00000009985frg110090.196ENSFHEG00000010540frg110090.980Fundulus_heteroclitus
ENSCVAG00000009985frg110078.039ENSGMOG00000000867frg110078.039Gadus_morhua
ENSCVAG00000009985frg110074.219ENSGALG00000013590-10074.219Gallus_gallus
ENSCVAG00000009985frg18189.372ENSGAFG00000013855frg110089.372Gambusia_affinis
ENSCVAG00000009985frg110079.608ENSGACG00000016888frg110079.608Gasterosteus_aculeatus
ENSCVAG00000009985frg110073.047ENSGAGG00000025012-10071.484Gopherus_agassizii
ENSCVAG00000009985frg17168.966ENSGGOG00000012888-9166.667Gorilla_gorilla
ENSCVAG00000009985frg110044.747ENSGGOG00000040796-10043.969Gorilla_gorilla
ENSCVAG00000009985frg110087.451ENSHBUG00000010667frg110087.451Haplochromis_burtoni
ENSCVAG00000009985frg110061.328ENSHGLG00000001211-10061.328Heterocephalus_glaber_female
ENSCVAG00000009985frg19969.141ENSHGLG00000020402-9469.141Heterocephalus_glaber_female
ENSCVAG00000009985frg19967.578ENSHGLG00000020943-9967.578Heterocephalus_glaber_female
ENSCVAG00000009985frg110071.984ENSHGLG00000005601FRG110071.984Heterocephalus_glaber_female
ENSCVAG00000009985frg19967.578ENSHGLG00100021211-9967.578Heterocephalus_glaber_male
ENSCVAG00000009985frg110072.374ENSHGLG00100016261-10072.374Heterocephalus_glaber_male
ENSCVAG00000009985frg110059.756ENSHGLG00100015285-10059.756Heterocephalus_glaber_male
ENSCVAG00000009985frg110061.719ENSHGLG00100010674-10061.719Heterocephalus_glaber_male
ENSCVAG00000009985frg18782.791ENSHCOG00000000224frg19680.444Hippocampus_comes
ENSCVAG00000009985frg110081.323ENSIPUG00000022716frg110078.862Ictalurus_punctatus
ENSCVAG00000009985frg110070.930ENSSTOG00000002857-10070.930Ictidomys_tridecemlineatus
ENSCVAG00000009985frg110070.155ENSJJAG00000020625Frg110069.380Jaculus_jaculus
ENSCVAG00000009985frg110087.843ENSKMAG00000005841frg110087.843Kryptolebias_marmoratus
ENSCVAG00000009985frg110083.137ENSLBEG00000001466frg110083.137Labrus_bergylta
ENSCVAG00000009985frg110063.602ENSLACG00000010243frg110063.602Latimeria_chalumnae
ENSCVAG00000009985frg110077.255ENSLOCG00000013868frg110077.255Lepisosteus_oculatus
ENSCVAG00000009985frg110069.767ENSLAFG00000011191FRG110069.767Loxodonta_africana
ENSCVAG00000009985frg110069.767ENSMFAG00000031178FRG110069.767Macaca_fascicularis
ENSCVAG00000009985frg18665.421ENSMFAG00000042873-8965.421Macaca_fascicularis
ENSCVAG00000009985frg110069.767ENSMMUG00000001824FRG110069.767Macaca_mulatta
ENSCVAG00000009985frg18265.517ENSMMUG00000047496-8765.517Macaca_mulatta
ENSCVAG00000009985frg19665.182ENSMNEG00000018620FRG110064.372Macaca_nemestrina
ENSCVAG00000009985frg110069.767ENSMLEG00000028881FRG110069.767Mandrillus_leucophaeus
ENSCVAG00000009985frg110087.451ENSMAMG00000012406frg110087.451Mastacembelus_armatus
ENSCVAG00000009985frg110087.059ENSMZEG00005007549frg110087.059Maylandia_zebra
ENSCVAG00000009985frg110073.828ENSMGAG00000011481-10073.828Meleagris_gallopavo
ENSCVAG00000009985frg110071.318ENSMAUG00000000847Frg110070.543Mesocricetus_auratus
ENSCVAG00000009985frg110070.155ENSMICG00000046816FRG110069.380Microcebus_murinus
ENSCVAG00000009985frg110064.981ENSMOCG00000023000Frg110064.981Microtus_ochrogaster
ENSCVAG00000009985frg18785.047ENSMMOG00000004008frg19583.482Mola_mola
ENSCVAG00000009985frg110068.605ENSMODG00000019031-8768.217Monodelphis_domestica
ENSCVAG00000009985frg110083.137ENSMALG00000018497frg110083.137Monopterus_albus
ENSCVAG00000009985frg110070.930MGP_CAROLIEiJ_G0031006Frg110070.155Mus_caroli
ENSCVAG00000009985frg110070.930ENSMUSG00000031590Frg110070.155Mus_musculus
ENSCVAG00000009985frg110071.318MGP_PahariEiJ_G0021475Frg110070.543Mus_pahari
ENSCVAG00000009985frg110070.543MGP_SPRETEiJ_G0032120Frg110069.767Mus_spretus
ENSCVAG00000009985frg110070.155ENSMPUG00000017962FRG110069.380Mustela_putorius_furo
ENSCVAG00000009985frg110071.984ENSMLUG00000023179FRG110071.984Myotis_lucifugus
ENSCVAG00000009985frg110070.543ENSNGAG00000016411Frg110069.767Nannospalax_galili
ENSCVAG00000009985frg18080.882ENSNBRG00000006806frg19580.882Neolamprologus_brichardi
ENSCVAG00000009985frg110061.686ENSNLEG00000035849-10061.686Nomascus_leucogenys
ENSCVAG00000009985frg110060.078ENSNLEG00000032333-10060.078Nomascus_leucogenys
ENSCVAG00000009985frg18265.174ENSNLEG00000028874-9165.174Nomascus_leucogenys
ENSCVAG00000009985frg18266.169ENSNLEG00000036059-8666.169Nomascus_leucogenys
ENSCVAG00000009985frg110049.219ENSNLEG00000032846-10062.500Nomascus_leucogenys
ENSCVAG00000009985frg110070.817ENSNLEG00000000930FRG110070.817Nomascus_leucogenys
ENSCVAG00000009985frg16272.368ENSMEUG00000007509-5972.368Notamacropus_eugenii
ENSCVAG00000009985frg110061.479ENSOPRG00000004722-10061.479Ochotona_princeps
ENSCVAG00000009985frg110056.098ENSODEG00000006953-10056.098Octodon_degus
ENSCVAG00000009985frg110071.984ENSODEG00000006458-10071.984Octodon_degus
ENSCVAG00000009985frg110088.672ENSONIG00000010162frg110088.672Oreochromis_niloticus
ENSCVAG00000009985frg17372.778ENSOANG00000005659-8072.778Ornithorhynchus_anatinus
ENSCVAG00000009985frg110069.380ENSOCUG00000009038-10068.605Oryctolagus_cuniculus
ENSCVAG00000009985frg19682.377ENSORLG00000008106frg18982.377Oryzias_latipes
ENSCVAG00000009985frg110083.137ENSORLG00020014355frg110083.137Oryzias_latipes_hni
ENSCVAG00000009985frg110083.137ENSORLG00015014159frg110083.137Oryzias_latipes_hsok
ENSCVAG00000009985frg18579.167ENSOMEG00000002468frg18979.167Oryzias_melastigma
ENSCVAG00000009985frg110072.093ENSOGAG00000005749-10070.155Otolemur_garnettii
ENSCVAG00000009985frg110068.582ENSOARG00000008592FRG110067.816Ovis_aries
ENSCVAG00000009985frg19652.896ENSPPAG00000043174-10052.756Pan_paniscus
ENSCVAG00000009985frg18469.907ENSPPAG00000043170-10069.907Pan_paniscus
ENSCVAG00000009985frg110069.261ENSPPRG00000019777-10069.261Panthera_pardus
ENSCVAG00000009985frg110069.767ENSPPRG00000025003-10068.992Panthera_pardus
ENSCVAG00000009985frg110069.650ENSPTIG00000006566-10069.650Panthera_tigris_altaica
ENSCVAG00000009985frg110069.767ENSPTIG00000006588-10068.992Panthera_tigris_altaica
ENSCVAG00000009985frg110070.155ENSPTRG00000016671-10070.155Pan_troglodytes
ENSCVAG00000009985frg19558.537ENSPTRG00000052363-9762.500Pan_troglodytes
ENSCVAG00000009985frg19661.181ENSPTRG00000050204-10061.181Pan_troglodytes
ENSCVAG00000009985frg110070.155ENSPTRG00000050205-10070.155Pan_troglodytes
ENSCVAG00000009985frg19662.447ENSPTRG00000044710-10062.447Pan_troglodytes
ENSCVAG00000009985frg18861.472ENSPTRG00000043123-9460.684Pan_troglodytes
ENSCVAG00000009985frg16865.882ENSPANG00000031530-8465.000Papio_anubis
ENSCVAG00000009985frg110074.699ENSPKIG00000024189frg110074.699Paramormyrops_kingsleyae
ENSCVAG00000009985frg19372.926ENSPSIG00000017971-8872.926Pelodiscus_sinensis
ENSCVAG00000009985frg19879.668ENSPMGG00000019273frg110079.668Periophthalmus_magnuspinnatus
ENSCVAG00000009985frg110071.318ENSPEMG00000000650Frg110070.543Peromyscus_maniculatus_bairdii
ENSCVAG00000009985frg110070.155ENSPCIG00000007530-6970.155Phascolarctos_cinereus
ENSCVAG00000009985frg110090.196ENSPFOG00000006721frg110090.196Poecilia_formosa
ENSCVAG00000009985frg110090.196ENSPMEG00000013816frg110090.196Poecilia_mexicana
ENSCVAG00000009985frg110090.196ENSPREG00000000097frg110090.196Poecilia_reticulata
ENSCVAG00000009985frg15975.862ENSPPYG00000029810-10075.862Pongo_abelii
ENSCVAG00000009985frg16469.620ENSPPYG00000011275-8769.620Pongo_abelii
ENSCVAG00000009985frg19566.667ENSPCAG00000014953-10066.260Procavia_capensis
ENSCVAG00000009985frg17957.843ENSPCOG00000022726FRG19556.863Propithecus_coquereli
ENSCVAG00000009985frg110056.589ENSPVAG00000010551FRG110056.589Pteropus_vampyrus
ENSCVAG00000009985frg17088.953ENSPNYG00000015209frg17488.953Pundamilia_nyererei
ENSCVAG00000009985frg110081.224ENSPNAG00000013259frg110081.224Pygocentrus_nattereri
ENSCVAG00000009985frg110070.930ENSRNOG00000009846Frg110070.930Rattus_norvegicus
ENSCVAG00000009985frg18768.750ENSRBIG00000042219-9468.444Rhinopithecus_bieti
ENSCVAG00000009985frg110067.829ENSRROG00000015523FRG110067.054Rhinopithecus_roxellana
ENSCVAG00000009985frg18668.246ENSRROG00000032084-8868.246Rhinopithecus_roxellana
ENSCVAG00000009985frg110071.984ENSSBOG00000034175FRG110071.984Saimiri_boliviensis_boliviensis
ENSCVAG00000009985frg110069.380ENSSHAG00000005886-10069.380Sarcophilus_harrisii
ENSCVAG00000009985frg19775.403ENSSFOG00015021361frg19975.403Scleropages_formosus
ENSCVAG00000009985frg110081.961ENSSMAG00000001213frg110081.961Scophthalmus_maximus
ENSCVAG00000009985frg110086.667ENSSDUG00000018886frg110086.667Seriola_dumerili
ENSCVAG00000009985frg110086.275ENSSLDG00000024191frg110086.275Seriola_lalandi_dorsalis
ENSCVAG00000009985frg16774.699ENSSARG00000002471-9372.414Sorex_araneus
ENSCVAG00000009985frg110072.619ENSSPUG00000017326-10072.619Sphenodon_punctatus
ENSCVAG00000009985frg110083.200ENSSPAG00000013294frg110083.200Stegastes_partitus
ENSCVAG00000009985frg110070.543ENSSSCG00000006996FRG110069.767Sus_scrofa
ENSCVAG00000009985frg15078.049ENSTGUG00000016714-10078.049Taeniopygia_guttata
ENSCVAG00000009985frg110072.266ENSTGUG00000007028-10072.266Taeniopygia_guttata
ENSCVAG00000009985frg110081.569ENSTRUG00000016208frg110081.569Takifugu_rubripes
ENSCVAG00000009985frg110081.961ENSTNIG00000007128frg110081.961Tetraodon_nigroviridis
ENSCVAG00000009985frg110069.380ENSTBEG00000014491-10068.605Tupaia_belangeri
ENSCVAG00000009985frg18146.465ENSTBEG00000017605-9946.465Tupaia_belangeri
ENSCVAG00000009985frg18653.081ENSTBEG00000012789-9953.081Tupaia_belangeri
ENSCVAG00000009985frg110069.767ENSTTRG00000003429FRG110069.767Tursiops_truncatus
ENSCVAG00000009985frg19672.269ENSUAMG00000012123-10072.269Ursus_americanus
ENSCVAG00000009985frg110070.155ENSUMAG00000021119FRG110069.380Ursus_maritimus
ENSCVAG00000009985frg110067.829ENSVPAG00000000616FRG110067.829Vicugna_pacos
ENSCVAG00000009985frg18774.419ENSVPAG00000011977-9473.094Vicugna_pacos
ENSCVAG00000009985frg18675.000ENSVVUG00000007181-7775.000Vulpes_vulpes
ENSCVAG00000009985frg110071.484ENSXETG00000012470frg110070.312Xenopus_tropicalis
ENSCVAG00000009985frg110083.730ENSXCOG00000005312frg110083.730Xiphophorus_couchianus
ENSCVAG00000009985frg110089.412ENSXMAG00000007751frg110089.412Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us