EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010155 (Gene tree)
Gene ID: 107084839
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4984 bases
Position: chrKL652610.1:1337578-1342561
Accession: 107084839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008363	TruB_N	PF01509.18	1.5e-20	1	1
ENSCVAP00000008363	PUA	PF01472.20	5.1e-17	1	1
ENSCVAP00000008363	DKCLD	PF08068.12	1.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001750	-	2073	XM_015374884	ENSCVAP00000008363	511 (aa)	XP_015230370	-

Gene Model

Click here to download ENSCVAG00000010155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010155	dkc1	83	80.365	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSCVAG00000010155	dkc1	91	89.053	ENSAPOG00000007799	dkc1	86	91.076	Acanthochromis_polyacanthus
ENSCVAG00000010155	dkc1	83	81.321	ENSAMEG00000002776	DKC1	86	80.410	Ailuropoda_melanoleuca
ENSCVAG00000010155	dkc1	88	89.087	ENSACIG00000022614	dkc1	88	89.655	Amphilophus_citrinellus
ENSCVAG00000010155	dkc1	93	88.454	ENSAOCG00000013159	dkc1	87	91.142	Amphiprion_ocellaris
ENSCVAG00000010155	dkc1	93	88.454	ENSAPEG00000002284	dkc1	88	90.972	Amphiprion_percula
ENSCVAG00000010155	dkc1	85	87.359	ENSATEG00000013682	dkc1	87	87.162	Anabas_testudineus
ENSCVAG00000010155	dkc1	84	82.151	ENSACAG00000015600	DKC1	75	82.151	Anolis_carolinensis
ENSCVAG00000010155	dkc1	83	80.920	ENSANAG00000022732	DKC1	77	86.802	Aotus_nancymaae
ENSCVAG00000010155	dkc1	94	84.855	ENSACLG00000015605	dkc1	81	93.484	Astatotilapia_calliptera
ENSCVAG00000010155	dkc1	88	86.031	ENSAMXG00000017108	dkc1	86	87.615	Astyanax_mexicanus
ENSCVAG00000010155	dkc1	84	79.773	ENSBTAG00000013045	DKC1	87	79.545	Bos_taurus
ENSCVAG00000010155	dkc1	79	64.286	WBGene00010478	K01G5.5	96	61.072	Caenorhabditis_elegans
ENSCVAG00000010155	dkc1	83	80.137	ENSCJAG00000004210	DKC1	85	79.909	Callithrix_jacchus
ENSCVAG00000010155	dkc1	86	70.682	ENSCAFG00000009311	-	77	76.650	Canis_familiaris
ENSCVAG00000010155	dkc1	86	79.545	ENSCAFG00000019620	-	76	85.787	Canis_familiaris
ENSCVAG00000010155	dkc1	86	79.545	ENSCAFG00020008918	-	76	85.787	Canis_lupus_dingo
ENSCVAG00000010155	dkc1	77	75.635	ENSCAFG00020009379	-	82	70.698	Canis_lupus_dingo
ENSCVAG00000010155	dkc1	84	79.773	ENSCHIG00000017392	DKC1	87	79.326	Capra_hircus
ENSCVAG00000010155	dkc1	90	77.174	ENSTSYG00000007681	DKC1	75	86.294	Carlito_syrichta
ENSCVAG00000010155	dkc1	78	80.835	ENSCAPG00000003342	DKC1	83	88.154	Cavia_aperea
ENSCVAG00000010155	dkc1	83	80.778	ENSCPOG00000008825	DKC1	78	85.714	Cavia_porcellus
ENSCVAG00000010155	dkc1	90	68.644	ENSCCAG00000027418	DKC1	85	69.977	Cebus_capucinus
ENSCVAG00000010155	dkc1	83	79.680	ENSCATG00000033602	DKC1	85	79.680	Cercocebus_atys
ENSCVAG00000010155	dkc1	85	79.727	ENSCLAG00000000720	DKC1	79	85.965	Chinchilla_lanigera
ENSCVAG00000010155	dkc1	83	79.909	ENSCSAG00000006706	DKC1	85	79.909	Chlorocebus_sabaeus
ENSCVAG00000010155	dkc1	83	82.217	ENSCPBG00000005858	DKC1	84	87.342	Chrysemys_picta_bellii
ENSCVAG00000010155	dkc1	77	80.000	ENSCING00000004599	-	77	80.051	Ciona_intestinalis
ENSCVAG00000010155	dkc1	77	79.293	ENSCSAVG00000010047	-	88	79.188	Ciona_savignyi
ENSCVAG00000010155	dkc1	83	79.909	ENSCANG00000027987	DKC1	85	79.909	Colobus_angolensis_palliatus
ENSCVAG00000010155	dkc1	88	58.186	ENSCGRG00001016789	-	88	58.945	Cricetulus_griseus_chok1gshd
ENSCVAG00000010155	dkc1	84	80.361	ENSCGRG00001014574	-	86	80.135	Cricetulus_griseus_chok1gshd
ENSCVAG00000010155	dkc1	84	80.361	ENSCGRG00000016075	-	86	80.135	Cricetulus_griseus_crigri
ENSCVAG00000010155	dkc1	95	56.468	ENSCGRG00000014809	-	86	58.945	Cricetulus_griseus_crigri
ENSCVAG00000010155	dkc1	93	84.388	ENSCSEG00000012633	dkc1	91	85.780	Cynoglossus_semilaevis
ENSCVAG00000010155	dkc1	81	90.865	ENSDARG00000016484	dkc1	84	89.671	Danio_rerio
ENSCVAG00000010155	dkc1	84	79.684	ENSDNOG00000004218	DKC1	86	79.684	Dasypus_novemcinctus
ENSCVAG00000010155	dkc1	55	70.968	ENSDORG00000013566	-	92	70.968	Dipodomys_ordii
ENSCVAG00000010155	dkc1	83	67.890	FBgn0259937	Nop60B	87	68.182	Drosophila_melanogaster
ENSCVAG00000010155	dkc1	83	78.132	ENSETEG00000016095	DKC1	80	84.478	Echinops_telfairi
ENSCVAG00000010155	dkc1	62	78.302	ENSEBUG00000015962	dkc1	98	79.725	Eptatretus_burgeri
ENSCVAG00000010155	dkc1	86	79.545	ENSEASG00005007484	DKC1	76	86.041	Equus_asinus_asinus
ENSCVAG00000010155	dkc1	91	76.660	ENSECAG00000023524	DKC1	76	86.041	Equus_caballus
ENSCVAG00000010155	dkc1	77	86.189	ENSEEUG00000003323	DKC1	92	86.375	Erinaceus_europaeus
ENSCVAG00000010155	dkc1	87	87.973	ENSELUG00000014538	dkc1	86	88.584	Esox_lucius
ENSCVAG00000010155	dkc1	79	85.323	ENSFCAG00000006577	DKC1	79	85.714	Felis_catus
ENSCVAG00000010155	dkc1	82	82.299	ENSFALG00000011496	DKC1	85	80.537	Ficedula_albicollis
ENSCVAG00000010155	dkc1	88	78.761	ENSFDAG00000002516	DKC1	88	80.092	Fukomys_damarensis
ENSCVAG00000010155	dkc1	84	95.082	ENSFHEG00000004627	dkc1	87	93.793	Fundulus_heteroclitus
ENSCVAG00000010155	dkc1	77	89.770	ENSGMOG00000017277	dkc1	100	89.770	Gadus_morhua
ENSCVAG00000010155	dkc1	82	83.372	ENSGALG00000005054	DKC1	84	81.609	Gallus_gallus
ENSCVAG00000010155	dkc1	93	92.693	ENSGAFG00000011486	dkc1	83	93.946	Gambusia_affinis
ENSCVAG00000010155	dkc1	81	92.233	ENSGACG00000004373	dkc1	96	94.225	Gasterosteus_aculeatus
ENSCVAG00000010155	dkc1	83	82.448	ENSGAGG00000011330	DKC1	84	82.217	Gopherus_agassizii
ENSCVAG00000010155	dkc1	83	80.365	ENSGGOG00000001045	DKC1	85	80.137	Gorilla_gorilla
ENSCVAG00000010155	dkc1	91	89.103	ENSHBUG00000012436	dkc1	93	89.103	Haplochromis_burtoni
ENSCVAG00000010155	dkc1	82	81.905	ENSHGLG00000000649	DKC1	86	78.652	Heterocephalus_glaber_female
ENSCVAG00000010155	dkc1	82	81.905	ENSHGLG00100001153	DKC1	87	78.652	Heterocephalus_glaber_male
ENSCVAG00000010155	dkc1	90	85.714	ENSHCOG00000021099	dkc1	85	89.227	Hippocampus_comes
ENSCVAG00000010155	dkc1	84	87.927	ENSIPUG00000010309	dkc1	86	85.843	Ictalurus_punctatus
ENSCVAG00000010155	dkc1	84	68.090	ENSSTOG00000011904	-	73	73.434	Ictidomys_tridecemlineatus
ENSCVAG00000010155	dkc1	84	79.279	ENSSTOG00000001074	-	91	78.604	Ictidomys_tridecemlineatus
ENSCVAG00000010155	dkc1	84	73.672	ENSSTOG00000020149	-	85	73.210	Ictidomys_tridecemlineatus
ENSCVAG00000010155	dkc1	54	71.898	ENSJJAG00000010086	-	90	71.898	Jaculus_jaculus
ENSCVAG00000010155	dkc1	84	90.867	ENSKMAG00000008010	dkc1	87	89.450	Kryptolebias_marmoratus
ENSCVAG00000010155	dkc1	83	90.398	ENSLBEG00000019122	dkc1	90	88.558	Labrus_bergylta
ENSCVAG00000010155	dkc1	87	80.222	ENSLACG00000014025	DKC1	90	87.277	Latimeria_chalumnae
ENSCVAG00000010155	dkc1	85	87.385	ENSLOCG00000013713	dkc1	88	88.679	Lepisosteus_oculatus
ENSCVAG00000010155	dkc1	84	79.955	ENSLAFG00000000221	DKC1	86	79.955	Loxodonta_africana
ENSCVAG00000010155	dkc1	83	79.680	ENSMFAG00000032398	DKC1	74	79.007	Macaca_fascicularis
ENSCVAG00000010155	dkc1	83	79.909	ENSMMUG00000005768	DKC1	85	79.909	Macaca_mulatta
ENSCVAG00000010155	dkc1	83	79.909	ENSMNEG00000034503	DKC1	85	79.909	Macaca_nemestrina
ENSCVAG00000010155	dkc1	83	79.909	ENSMLEG00000034422	DKC1	85	79.909	Mandrillus_leucophaeus
ENSCVAG00000010155	dkc1	81	92.233	ENSMAMG00000005427	dkc1	89	94.486	Mastacembelus_armatus
ENSCVAG00000010155	dkc1	91	89.316	ENSMZEG00005014503	dkc1	93	89.316	Maylandia_zebra
ENSCVAG00000010155	dkc1	75	85.128	ENSMGAG00000009238	DKC1	89	82.282	Meleagris_gallopavo
ENSCVAG00000010155	dkc1	55	70.968	ENSMAUG00000016454	-	92	70.968	Mesocricetus_auratus
ENSCVAG00000010155	dkc1	84	69.910	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSCVAG00000010155	dkc1	77	85.101	ENSMICG00000038751	-	80	84.461	Microcebus_murinus
ENSCVAG00000010155	dkc1	55	68.459	ENSMOCG00000001169	-	92	68.459	Microtus_ochrogaster
ENSCVAG00000010155	dkc1	82	91.489	ENSMMOG00000020348	dkc1	87	93.484	Mola_mola
ENSCVAG00000010155	dkc1	78	84.788	ENSMODG00000009243	DKC1	70	85.000	Monodelphis_domestica
ENSCVAG00000010155	dkc1	89	88.377	ENSMALG00000009454	dkc1	86	89.703	Monopterus_albus
ENSCVAG00000010155	dkc1	83	70.227	MGP_CAROLIEiJ_G0033191	Dkc1	84	82.927	Mus_caroli
ENSCVAG00000010155	dkc1	84	79.684	ENSMUSG00000031403	Dkc1	78	85.464	Mus_musculus
ENSCVAG00000010155	dkc1	82	80.690	MGP_PahariEiJ_G0031735	Dkc1	78	85.464	Mus_pahari
ENSCVAG00000010155	dkc1	84	79.684	MGP_SPRETEiJ_G0034351	Dkc1	78	85.464	Mus_spretus
ENSCVAG00000010155	dkc1	89	77.802	ENSMPUG00000016136	DKC1	84	77.342	Mustela_putorius_furo
ENSCVAG00000010155	dkc1	84	76.009	ENSMLUG00000011918	DKC1	76	81.955	Myotis_lucifugus
ENSCVAG00000010155	dkc1	55	70.968	ENSNGAG00000015724	-	92	70.968	Nannospalax_galili
ENSCVAG00000010155	dkc1	81	92.289	ENSNBRG00000005638	dkc1	81	93.734	Neolamprologus_brichardi
ENSCVAG00000010155	dkc1	83	80.137	ENSNLEG00000014323	DKC1	85	80.230	Nomascus_leucogenys
ENSCVAG00000010155	dkc1	81	79.759	ENSMEUG00000001066	DKC1	87	81.203	Notamacropus_eugenii
ENSCVAG00000010155	dkc1	68	78.857	ENSOPRG00000005248	DKC1	70	78.857	Ochotona_princeps
ENSCVAG00000010155	dkc1	55	70.609	ENSODEG00000000549	-	92	70.609	Octodon_degus
ENSCVAG00000010155	dkc1	77	87.374	ENSODEG00000011816	-	77	87.563	Octodon_degus
ENSCVAG00000010155	dkc1	90	89.655	ENSONIG00000013889	dkc1	96	84.538	Oreochromis_niloticus
ENSCVAG00000010155	dkc1	82	82.009	ENSOANG00000008713	-	88	82.284	Ornithorhynchus_anatinus
ENSCVAG00000010155	dkc1	55	62.171	ENSOANG00000022295	-	70	70.120	Ornithorhynchus_anatinus
ENSCVAG00000010155	dkc1	83	80.137	ENSOCUG00000012646	DKC1	85	79.680	Oryctolagus_cuniculus
ENSCVAG00000010155	dkc1	88	87.417	ENSORLG00000018748	dkc1	85	87.935	Oryzias_latipes
ENSCVAG00000010155	dkc1	83	91.038	ENSOMEG00000005786	dkc1	81	91.102	Oryzias_melastigma
ENSCVAG00000010155	dkc1	83	78.348	ENSOGAG00000003399	DKC1	75	86.294	Otolemur_garnettii
ENSCVAG00000010155	dkc1	84	80.000	ENSOARG00000003047	DKC1	87	79.551	Ovis_aries
ENSCVAG00000010155	dkc1	83	80.365	ENSPPAG00000023820	DKC1	85	80.365	Pan_paniscus
ENSCVAG00000010155	dkc1	79	85.323	ENSPPRG00000009104	DKC1	79	85.714	Panthera_pardus
ENSCVAG00000010155	dkc1	83	81.221	ENSPTIG00000017469	DKC1	86	81.221	Panthera_tigris_altaica
ENSCVAG00000010155	dkc1	83	80.365	ENSPTRG00000043416	-	74	80.137	Pan_troglodytes
ENSCVAG00000010155	dkc1	83	80.365	ENSPTRG00000022449	DKC1	85	80.137	Pan_troglodytes
ENSCVAG00000010155	dkc1	83	79.909	ENSPANG00000011978	DKC1	85	79.909	Papio_anubis
ENSCVAG00000010155	dkc1	84	86.175	ENSPKIG00000008443	dkc1	92	85.714	Paramormyrops_kingsleyae
ENSCVAG00000010155	dkc1	70	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSCVAG00000010155	dkc1	90	75.356	ENSPMGG00000004097	dkc1	73	86.967	Periophthalmus_magnuspinnatus
ENSCVAG00000010155	dkc1	63	82.759	ENSPEMG00000013348	Dkc1	84	83.425	Peromyscus_maniculatus_bairdii
ENSCVAG00000010155	dkc1	81	83.855	ENSPCIG00000016706	DKC1	67	85.000	Phascolarctos_cinereus
ENSCVAG00000010155	dkc1	94	92.324	ENSPFOG00000018653	dkc1	97	93.196	Poecilia_formosa
ENSCVAG00000010155	dkc1	94	92.324	ENSPLAG00000003272	dkc1	88	93.196	Poecilia_latipinna
ENSCVAG00000010155	dkc1	94	92.116	ENSPMEG00000010413	dkc1	97	92.990	Poecilia_mexicana
ENSCVAG00000010155	dkc1	94	92.324	ENSPREG00000004100	dkc1	88	93.196	Poecilia_reticulata
ENSCVAG00000010155	dkc1	83	80.365	ENSPPYG00000020892	DKC1	86	80.137	Pongo_abelii
ENSCVAG00000010155	dkc1	73	85.294	ENSPCAG00000015034	DKC1	71	86.777	Procavia_capensis
ENSCVAG00000010155	dkc1	84	79.007	ENSPCOG00000026874	DKC1	86	79.007	Propithecus_coquereli
ENSCVAG00000010155	dkc1	83	82.009	ENSPVAG00000009222	DKC1	85	81.265	Pteropus_vampyrus
ENSCVAG00000010155	dkc1	94	84.615	ENSPNYG00000020063	dkc1	89	86.830	Pundamilia_nyererei
ENSCVAG00000010155	dkc1	88	85.651	ENSPNAG00000005780	dkc1	87	86.957	Pygocentrus_nattereri
ENSCVAG00000010155	dkc1	84	77.427	ENSRNOG00000055562	Dkc1	87	76.975	Rattus_norvegicus
ENSCVAG00000010155	dkc1	83	79.909	ENSRBIG00000028457	DKC1	73	79.909	Rhinopithecus_bieti
ENSCVAG00000010155	dkc1	83	79.909	ENSRROG00000044780	DKC1	85	79.909	Rhinopithecus_roxellana
ENSCVAG00000010155	dkc1	75	72.063	YLR175W	-	79	72.063	Saccharomyces_cerevisiae
ENSCVAG00000010155	dkc1	83	80.365	ENSSBOG00000033746	DKC1	85	80.137	Saimiri_boliviensis_boliviensis
ENSCVAG00000010155	dkc1	77	86.364	ENSSHAG00000002463	DKC1	84	86.329	Sarcophilus_harrisii
ENSCVAG00000010155	dkc1	87	85.809	ENSSFOG00015009585	dkc1	86	86.073	Scleropages_formosus
ENSCVAG00000010155	dkc1	87	88.864	ENSSMAG00000002552	dkc1	86	89.066	Scophthalmus_maximus
ENSCVAG00000010155	dkc1	89	90.749	ENSSDUG00000009963	dkc1	87	90.847	Seriola_dumerili
ENSCVAG00000010155	dkc1	89	88.571	ENSSLDG00000019342	dkc1	88	88.991	Seriola_lalandi_dorsalis
ENSCVAG00000010155	dkc1	86	74.890	ENSSARG00000001822	DKC1	80	81.203	Sorex_araneus
ENSCVAG00000010155	dkc1	81	83.495	ENSSPUG00000018907	DKC1	78	83.495	Sphenodon_punctatus
ENSCVAG00000010155	dkc1	85	91.705	ENSSPAG00000002585	dkc1	82	91.494	Stegastes_partitus
ENSCVAG00000010155	dkc1	91	76.017	ENSSSCG00000012823	DKC1	83	85.213	Sus_scrofa
ENSCVAG00000010155	dkc1	76	85.427	ENSTGUG00000006781	DKC1	88	83.416	Taeniopygia_guttata
ENSCVAG00000010155	dkc1	84	89.559	ENSTRUG00000004413	dkc1	87	89.376	Takifugu_rubripes
ENSCVAG00000010155	dkc1	84	71.267	ENSTNIG00000002582	dkc1	87	70.946	Tetraodon_nigroviridis
ENSCVAG00000010155	dkc1	53	86.081	ENSTBEG00000011262	DKC1	74	86.667	Tupaia_belangeri
ENSCVAG00000010155	dkc1	54	85.921	ENSTTRG00000008089	DKC1	55	85.921	Tursiops_truncatus
ENSCVAG00000010155	dkc1	91	77.039	ENSUAMG00000022721	DKC1	87	83.575	Ursus_americanus
ENSCVAG00000010155	dkc1	91	76.609	ENSUMAG00000016899	DKC1	92	86.772	Ursus_maritimus
ENSCVAG00000010155	dkc1	79	83.130	ENSVVUG00000020734	-	70	83.498	Vulpes_vulpes
ENSCVAG00000010155	dkc1	87	65.101	ENSVVUG00000021671	-	73	71.066	Vulpes_vulpes
ENSCVAG00000010155	dkc1	92	80.171	ENSXETG00000032517	DKC1	84	86.557	Xenopus_tropicalis
ENSCVAG00000010155	dkc1	91	92.275	ENSXCOG00000005498	dkc1	99	92.489	Xiphophorus_couchianus
ENSCVAG00000010155	dkc1	94	93.983	ENSXMAG00000004919	dkc1	97	93.789	Xiphophorus_maculatus