EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010197 (Gene tree)
Gene ID: 107088766
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 18937 bases
Position: chrKL652728.1:718673-737609
Accession: 107088766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008259	RNase_T	PF00929.24	5.3e-20	1	1
ENSCVAP00000025340	RNase_T	PF00929.24	5.3e-20	1	1
ENSCVAP00000008295	RNase_T	PF00929.24	5.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001854	-	4035	-	ENSCVAP00000008295	1210 (aa)	-	-
ENSCVAT00000001923	-	3579	-	ENSCVAP00000008259	1192 (aa)	-	-
ENSCVAT00000001886	-	3920	XM_015381136	ENSCVAP00000025340	1206 (aa)	XP_015236622	UPI000742C38F

Gene Model

Click here to download ENSCVAG00000010197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010197	pan2	100	94.113	ENSAPOG00000022955	pan2	100	94.113	Acanthochromis_polyacanthus
ENSCVAG00000010197	pan2	100	75.557	ENSAMEG00000003824	PAN2	100	75.557	Ailuropoda_melanoleuca
ENSCVAG00000010197	pan2	99	71.261	ENSACIG00000012858	PAN2	99	71.261	Amphilophus_citrinellus
ENSCVAG00000010197	pan2	99	90.293	ENSACIG00000013079	pan2	99	90.293	Amphilophus_citrinellus
ENSCVAG00000010197	pan2	100	94.444	ENSAOCG00000022334	pan2	100	94.444	Amphiprion_ocellaris
ENSCVAG00000010197	pan2	100	93.884	ENSAPEG00000022760	pan2	100	93.884	Amphiprion_percula
ENSCVAG00000010197	pan2	99	94.314	ENSATEG00000024030	pan2	100	94.314	Anabas_testudineus
ENSCVAG00000010197	pan2	94	77.160	ENSAPLG00000005195	PAN2	100	77.160	Anas_platyrhynchos
ENSCVAG00000010197	pan2	100	76.407	ENSACAG00000007067	PAN2	100	76.407	Anolis_carolinensis
ENSCVAG00000010197	pan2	100	75.207	ENSANAG00000036468	PAN2	99	80.851	Aotus_nancymaae
ENSCVAG00000010197	pan2	100	93.058	ENSACLG00000023674	pan2	100	93.223	Astatotilapia_calliptera
ENSCVAG00000010197	pan2	99	70.008	ENSACLG00000023821	pan2	99	70.648	Astatotilapia_calliptera
ENSCVAG00000010197	pan2	99	86.880	ENSAMXG00000005418	pan2	98	86.880	Astyanax_mexicanus
ENSCVAG00000010197	pan2	100	75.537	ENSBTAG00000004376	PAN2	100	75.537	Bos_taurus
ENSCVAG00000010197	pan2	100	75.041	ENSCJAG00000011141	PAN2	100	75.041	Callithrix_jacchus
ENSCVAG00000010197	pan2	100	75.392	ENSCAFG00000000119	PAN2	100	79.744	Canis_familiaris
ENSCVAG00000010197	pan2	100	74.531	ENSCAFG00020024865	PAN2	100	74.531	Canis_lupus_dingo
ENSCVAG00000010197	pan2	100	74.938	ENSCHIG00000026935	PAN2	100	74.938	Capra_hircus
ENSCVAG00000010197	pan2	100	74.344	ENSTSYG00000006927	PAN2	99	80.585	Carlito_syrichta
ENSCVAG00000010197	pan2	100	75.041	ENSCPOG00000014918	PAN2	100	75.041	Cavia_porcellus
ENSCVAG00000010197	pan2	100	75.289	ENSCCAG00000036637	PAN2	99	80.585	Cebus_capucinus
ENSCVAG00000010197	pan2	100	75.062	ENSCATG00000045076	PAN2	99	81.283	Cercocebus_atys
ENSCVAG00000010197	pan2	100	74.795	ENSCLAG00000011700	PAN2	100	74.795	Chinchilla_lanigera
ENSCVAG00000010197	pan2	100	74.897	ENSCSAG00000005173	PAN2	100	74.897	Chlorocebus_sabaeus
ENSCVAG00000010197	pan2	100	76.821	ENSCPBG00000014029	PAN2	100	77.126	Chrysemys_picta_bellii
ENSCVAG00000010197	pan2	91	47.217	ENSCSAVG00000003833	-	99	52.654	Ciona_savignyi
ENSCVAG00000010197	pan2	100	73.515	ENSCANG00000017798	PAN2	100	73.515	Colobus_angolensis_palliatus
ENSCVAG00000010197	pan2	100	75.537	ENSCGRG00001019707	Pan2	100	75.537	Cricetulus_griseus_chok1gshd
ENSCVAG00000010197	pan2	100	74.897	ENSCGRG00000009996	Pan2	100	74.897	Cricetulus_griseus_crigri
ENSCVAG00000010197	pan2	100	88.474	ENSCSEG00000021529	pan2	100	88.474	Cynoglossus_semilaevis
ENSCVAG00000010197	pan2	100	85.584	ENSDARG00000074675	pan2	100	85.833	Danio_rerio
ENSCVAG00000010197	pan2	100	75.600	ENSDNOG00000010940	PAN2	100	75.600	Dasypus_novemcinctus
ENSCVAG00000010197	pan2	98	41.172	FBgn0033352	PAN2	96	42.244	Drosophila_melanogaster
ENSCVAG00000010197	pan2	75	85.838	ENSETEG00000012041	PAN2	81	85.838	Echinops_telfairi
ENSCVAG00000010197	pan2	99	57.735	ENSEBUG00000002773	pan2	98	57.735	Eptatretus_burgeri
ENSCVAG00000010197	pan2	100	75.520	ENSEASG00005005235	PAN2	100	75.520	Equus_asinus_asinus
ENSCVAG00000010197	pan2	100	75.475	ENSECAG00000019814	PAN2	100	75.475	Equus_caballus
ENSCVAG00000010197	pan2	99	88.583	ENSELUG00000024604	pan2	99	88.917	Esox_lucius
ENSCVAG00000010197	pan2	100	75.475	ENSFCAG00000012021	PAN2	100	75.475	Felis_catus
ENSCVAG00000010197	pan2	99	77.181	ENSFALG00000000464	PAN2	98	77.433	Ficedula_albicollis
ENSCVAG00000010197	pan2	100	74.815	ENSFDAG00000017104	PAN2	100	74.816	Fukomys_damarensis
ENSCVAG00000010197	pan2	91	95.833	ENSFHEG00000000157	pan2	98	95.833	Fundulus_heteroclitus
ENSCVAG00000010197	pan2	100	86.232	ENSGMOG00000007249	pan2	99	86.739	Gadus_morhua
ENSCVAG00000010197	pan2	100	77.318	ENSGALG00000031512	PAN2	100	77.393	Gallus_gallus
ENSCVAG00000010197	pan2	100	96.103	ENSGAFG00000000284	pan2	100	96.103	Gambusia_affinis
ENSCVAG00000010197	pan2	100	90.700	ENSGACG00000010722	pan2	99	91.757	Gasterosteus_aculeatus
ENSCVAG00000010197	pan2	100	76.242	ENSGAGG00000007868	PAN2	100	76.548	Gopherus_agassizii
ENSCVAG00000010197	pan2	100	74.979	ENSGGOG00000009115	PAN2	99	81.283	Gorilla_gorilla
ENSCVAG00000010197	pan2	100	93.367	ENSHBUG00000005234	pan2	100	93.532	Haplochromis_burtoni
ENSCVAG00000010197	pan2	99	74.834	ENSHGLG00000005647	PAN2	99	74.016	Heterocephalus_glaber_female
ENSCVAG00000010197	pan2	99	74.585	ENSHGLG00100014057	PAN2	99	73.770	Heterocephalus_glaber_male
ENSCVAG00000010197	pan2	100	89.587	ENSHCOG00000007920	pan2	100	89.587	Hippocampus_comes
ENSCVAG00000010197	pan2	100	86.116	ENSIPUG00000011065	PAN2	100	86.116	Ictalurus_punctatus
ENSCVAG00000010197	pan2	94	75.281	ENSSTOG00000015974	PAN2	100	75.281	Ictidomys_tridecemlineatus
ENSCVAG00000010197	pan2	100	75.166	ENSJJAG00000013044	Pan2	98	75.166	Jaculus_jaculus
ENSCVAG00000010197	pan2	100	94.279	ENSKMAG00000006192	pan2	100	94.279	Kryptolebias_marmoratus
ENSCVAG00000010197	pan2	99	87.320	ENSLBEG00000015763	pan2	98	92.167	Labrus_bergylta
ENSCVAG00000010197	pan2	100	69.555	ENSLACG00000018694	PAN2	100	70.161	Latimeria_chalumnae
ENSCVAG00000010197	pan2	100	85.597	ENSLOCG00000004333	pan2	99	85.845	Lepisosteus_oculatus
ENSCVAG00000010197	pan2	100	72.966	ENSLAFG00000014873	PAN2	100	73.033	Loxodonta_africana
ENSCVAG00000010197	pan2	100	74.897	ENSMFAG00000002293	PAN2	99	81.283	Macaca_fascicularis
ENSCVAG00000010197	pan2	100	74.897	ENSMMUG00000013482	PAN2	100	78.086	Macaca_mulatta
ENSCVAG00000010197	pan2	100	74.979	ENSMNEG00000033264	PAN2	99	81.016	Macaca_nemestrina
ENSCVAG00000010197	pan2	100	75.062	ENSMLEG00000037388	PAN2	99	81.283	Mandrillus_leucophaeus
ENSCVAG00000010197	pan2	99	93.556	ENSMAMG00000001624	pan2	100	93.527	Mastacembelus_armatus
ENSCVAG00000010197	pan2	98	71.672	ENSMZEG00005026472	pan2	99	71.672	Maylandia_zebra
ENSCVAG00000010197	pan2	100	93.058	ENSMZEG00005026462	pan2	100	93.223	Maylandia_zebra
ENSCVAG00000010197	pan2	97	78.074	ENSMGAG00000001439	PAN2	99	78.130	Meleagris_gallopavo
ENSCVAG00000010197	pan2	99	75.604	ENSMAUG00000012602	Pan2	99	75.604	Mesocricetus_auratus
ENSCVAG00000010197	pan2	100	75.145	ENSMICG00000017661	PAN2	99	79.301	Microcebus_murinus
ENSCVAG00000010197	pan2	100	75.207	ENSMOCG00000007191	Pan2	100	75.207	Microtus_ochrogaster
ENSCVAG00000010197	pan2	99	92.636	ENSMMOG00000009313	pan2	97	92.636	Mola_mola
ENSCVAG00000010197	pan2	99	93.305	ENSMALG00000013377	pan2	100	92.969	Monopterus_albus
ENSCVAG00000010197	pan2	100	74.629	MGP_CAROLIEiJ_G0015930	Pan2	100	74.629	Mus_caroli
ENSCVAG00000010197	pan2	100	75.353	ENSMUSG00000005682	Pan2	100	75.353	Mus_musculus
ENSCVAG00000010197	pan2	100	74.794	MGP_PahariEiJ_G0031154	Pan2	100	74.794	Mus_pahari
ENSCVAG00000010197	pan2	100	75.436	MGP_SPRETEiJ_G0016755	Pan2	100	75.436	Mus_spretus
ENSCVAG00000010197	pan2	100	75.640	ENSMPUG00000001383	PAN2	100	75.640	Mustela_putorius_furo
ENSCVAG00000010197	pan2	100	75.207	ENSMLUG00000006737	PAN2	100	75.207	Myotis_lucifugus
ENSCVAG00000010197	pan2	100	75.145	ENSNGAG00000007930	Pan2	100	75.145	Nannospalax_galili
ENSCVAG00000010197	pan2	92	97.209	ENSNBRG00000006585	pan2	99	97.209	Neolamprologus_brichardi
ENSCVAG00000010197	pan2	100	70.816	ENSNLEG00000017499	PAN2	99	80.749	Nomascus_leucogenys
ENSCVAG00000010197	pan2	100	76.364	ENSMEUG00000010125	PAN2	100	76.505	Notamacropus_eugenii
ENSCVAG00000010197	pan2	100	74.732	ENSOPRG00000001468	PAN2	100	74.774	Ochotona_princeps
ENSCVAG00000010197	pan2	100	74.529	ENSODEG00000007203	PAN2	100	74.529	Octodon_degus
ENSCVAG00000010197	pan2	100	91.351	ENSONIG00000016732	pan2	100	91.351	Oreochromis_niloticus
ENSCVAG00000010197	pan2	82	67.393	ENSOANG00000005151	PAN2	99	67.592	Ornithorhynchus_anatinus
ENSCVAG00000010197	pan2	100	74.795	ENSOCUG00000007227	PAN2	100	74.877	Oryctolagus_cuniculus
ENSCVAG00000010197	pan2	99	91.973	ENSORLG00000015195	pan2	100	91.957	Oryzias_latipes
ENSCVAG00000010197	pan2	99	92.057	ENSORLG00020000277	pan2	100	92.040	Oryzias_latipes_hni
ENSCVAG00000010197	pan2	99	91.890	ENSORLG00015005193	pan2	100	91.874	Oryzias_latipes_hsok
ENSCVAG00000010197	pan2	99	92.057	ENSOMEG00000022087	pan2	100	92.040	Oryzias_melastigma
ENSCVAG00000010197	pan2	100	74.120	ENSOGAG00000030620	PAN2	100	74.183	Otolemur_garnettii
ENSCVAG00000010197	pan2	100	75.372	ENSOARG00000009379	PAN2	100	75.372	Ovis_aries
ENSCVAG00000010197	pan2	100	74.979	ENSPPAG00000001208	PAN2	99	81.283	Pan_paniscus
ENSCVAG00000010197	pan2	100	75.392	ENSPPRG00000021586	PAN2	100	75.392	Panthera_pardus
ENSCVAG00000010197	pan2	100	71.652	ENSPTIG00000012494	PAN2	100	71.652	Panthera_tigris_altaica
ENSCVAG00000010197	pan2	100	74.979	ENSPTRG00000052054	PAN2	99	81.283	Pan_troglodytes
ENSCVAG00000010197	pan2	92	76.370	ENSPANG00000018906	PAN2	99	81.283	Papio_anubis
ENSCVAG00000010197	pan2	100	85.620	ENSPKIG00000003973	pan2	100	85.620	Paramormyrops_kingsleyae
ENSCVAG00000010197	pan2	100	73.388	ENSPSIG00000003267	PAN2	100	73.454	Pelodiscus_sinensis
ENSCVAG00000010197	pan2	100	90.369	ENSPMGG00000023186	pan2	100	90.369	Periophthalmus_magnuspinnatus
ENSCVAG00000010197	pan2	100	74.897	ENSPEMG00000018505	Pan2	100	74.897	Peromyscus_maniculatus_bairdii
ENSCVAG00000010197	pan2	91	67.692	ENSPMAG00000004731	pan2	100	67.692	Petromyzon_marinus
ENSCVAG00000010197	pan2	100	76.904	ENSPCIG00000024643	PAN2	100	77.044	Phascolarctos_cinereus
ENSCVAG00000010197	pan2	100	96.517	ENSPFOG00000008392	pan2	100	96.517	Poecilia_formosa
ENSCVAG00000010197	pan2	100	96.434	ENSPLAG00000009198	pan2	100	96.434	Poecilia_latipinna
ENSCVAG00000010197	pan2	100	96.434	ENSPMEG00000001484	pan2	100	96.434	Poecilia_mexicana
ENSCVAG00000010197	pan2	100	96.517	ENSPREG00000000900	pan2	100	96.517	Poecilia_reticulata
ENSCVAG00000010197	pan2	89	77.099	ENSPPYG00000004656	PAN2	100	77.099	Pongo_abelii
ENSCVAG00000010197	pan2	92	76.550	ENSPCAG00000011047	PAN2	99	76.550	Procavia_capensis
ENSCVAG00000010197	pan2	100	75.227	ENSPCOG00000018263	PAN2	100	75.227	Propithecus_coquereli
ENSCVAG00000010197	pan2	94	73.407	ENSPVAG00000007591	PAN2	94	73.407	Pteropus_vampyrus
ENSCVAG00000010197	pan2	99	93.478	ENSPNYG00000002629	pan2	99	93.645	Pundamilia_nyererei
ENSCVAG00000010197	pan2	100	87.521	ENSPNAG00000027140	pan2	100	87.521	Pygocentrus_nattereri
ENSCVAG00000010197	pan2	100	75.436	ENSRNOG00000032441	Pan2	100	75.436	Rattus_norvegicus
ENSCVAG00000010197	pan2	100	74.814	ENSRBIG00000029591	PAN2	99	80.749	Rhinopithecus_bieti
ENSCVAG00000010197	pan2	100	74.732	ENSRROG00000041950	PAN2	99	80.749	Rhinopithecus_roxellana
ENSCVAG00000010197	pan2	100	75.124	ENSSBOG00000027343	PAN2	99	80.585	Saimiri_boliviensis_boliviensis
ENSCVAG00000010197	pan2	92	76.717	ENSSHAG00000000122	PAN2	99	78.444	Sarcophilus_harrisii
ENSCVAG00000010197	pan2	100	86.446	ENSSFOG00015017740	pan2	100	86.446	Scleropages_formosus
ENSCVAG00000010197	pan2	100	91.419	ENSSMAG00000020901	pan2	100	91.749	Scophthalmus_maximus
ENSCVAG00000010197	pan2	100	94.628	ENSSDUG00000001840	pan2	100	94.628	Seriola_dumerili
ENSCVAG00000010197	pan2	100	94.942	ENSSLDG00000013866	pan2	100	94.942	Seriola_lalandi_dorsalis
ENSCVAG00000010197	pan2	92	76.089	ENSSARG00000013350	PAN2	92	76.089	Sorex_araneus
ENSCVAG00000010197	pan2	92	78.636	ENSSPUG00000004270	PAN2	99	78.905	Sphenodon_punctatus
ENSCVAG00000010197	pan2	100	94.050	ENSSPAG00000019970	pan2	100	94.050	Stegastes_partitus
ENSCVAG00000010197	pan2	100	75.062	ENSSSCG00000000393	PAN2	100	75.062	Sus_scrofa
ENSCVAG00000010197	pan2	100	91.818	ENSTRUG00000014260	pan2	100	91.818	Takifugu_rubripes
ENSCVAG00000010197	pan2	100	91.322	ENSTNIG00000012537	pan2	99	91.722	Tetraodon_nigroviridis
ENSCVAG00000010197	pan2	80	75.100	ENSTTRG00000007150	PAN2	80	75.100	Tursiops_truncatus
ENSCVAG00000010197	pan2	100	75.914	ENSUAMG00000026522	PAN2	100	75.914	Ursus_americanus
ENSCVAG00000010197	pan2	100	74.918	ENSUMAG00000017020	PAN2	100	74.918	Ursus_maritimus
ENSCVAG00000010197	pan2	79	91.133	ENSVPAG00000007309	PAN2	85	91.133	Vicugna_pacos
ENSCVAG00000010197	pan2	100	75.392	ENSVVUG00000021878	PAN2	100	75.392	Vulpes_vulpes
ENSCVAG00000010197	pan2	99	73.754	ENSXETG00000009434	pan2	100	74.747	Xenopus_tropicalis
ENSCVAG00000010197	pan2	100	91.191	ENSXCOG00000014391	pan2	100	91.191	Xiphophorus_couchianus
ENSCVAG00000010197	pan2	100	96.434	ENSXMAG00000011661	pan2	100	96.434	Xiphophorus_maculatus