EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010267 (Gene tree)
Gene ID: 107103697
Gene Symbol: -
Alias: -
Full Name: cyclin-dependent kinase-like 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10097 bases
Position: chrKL654006.1:17917-28013
Accession: 107103697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025446	RIO1	PF01163.22	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001603	-	999	XM_015403494	ENSCVAP00000025446	332 (aa)	XP_015258980	-

Gene Model

Click here to download ENSCVAG00000010267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010267	-	88	31.250	ENSCVAG00000018631	rps6ka4	59	31.250
ENSCVAG00000010267	-	86	35.395	ENSCVAG00000015947	mapk12a	80	35.395
ENSCVAG00000010267	-	62	30.732	ENSCVAG00000011060	nim1k	50	30.732
ENSCVAG00000010267	-	58	32.569	ENSCVAG00000003185	-	50	32.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010267	-	96	83.232	ENSGAFG00000015995	-	98	83.232	Gambusia_affinis
ENSCVAG00000010267	-	81	95.911	ENSKMAG00000008845	-	89	95.911	Kryptolebias_marmoratus
ENSCVAG00000010267	-	96	94.688	ENSPFOG00000015723	-	88	94.688	Poecilia_formosa
ENSCVAG00000010267	-	97	93.498	ENSPLAG00000003942	-	92	94.654	Poecilia_latipinna
ENSCVAG00000010267	-	74	96.748	ENSPMEG00000019972	-	79	96.748	Poecilia_mexicana
ENSCVAG00000010267	-	97	92.879	ENSPREG00000018327	-	92	94.025	Poecilia_reticulata