EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010459 (Gene tree)
Gene ID: 107090428
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 32191 bases
Position: chrKL652794.1:851733-883923
Accession: 107090428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025538	CPSF_A	PF03178.15	9.9e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001385	-	4663	XM_015383798	ENSCVAP00000025538	1217 (aa)	XP_015239284	UPI00074289A0

Gene Model

Click here to download ENSCVAG00000010459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010459	sf3b3	100	92.605	ENSG00000189091	SF3B3	100	93.548	Homo_sapiens
ENSCVAG00000010459	sf3b3	96	97.780	ENSAPOG00000006172	sf3b3	98	97.780	Acanthochromis_polyacanthus
ENSCVAG00000010459	sf3b3	100	92.459	ENSAMEG00000002187	SF3B3	100	92.459	Ailuropoda_melanoleuca
ENSCVAG00000010459	sf3b3	92	95.174	ENSACIG00000016487	sf3b3	99	95.174	Amphilophus_citrinellus
ENSCVAG00000010459	sf3b3	100	97.864	ENSAOCG00000007158	sf3b3	100	97.864	Amphiprion_ocellaris
ENSCVAG00000010459	sf3b3	100	97.864	ENSAPEG00000022786	sf3b3	100	97.864	Amphiprion_percula
ENSCVAG00000010459	sf3b3	100	98.028	ENSATEG00000013708	sf3b3	100	98.028	Anabas_testudineus
ENSCVAG00000010459	sf3b3	81	92.683	ENSAPLG00000004996	SF3B3	99	92.683	Anas_platyrhynchos
ENSCVAG00000010459	sf3b3	100	92.933	ENSACAG00000001817	SF3B3	100	92.933	Anolis_carolinensis
ENSCVAG00000010459	sf3b3	100	92.605	ENSANAG00000028001	SF3B3	100	92.605	Aotus_nancymaae
ENSCVAG00000010459	sf3b3	96	97.694	ENSACLG00000022555	sf3b3	98	97.694	Astatotilapia_calliptera
ENSCVAG00000010459	sf3b3	100	97.206	ENSAMXG00000003410	sf3b3	100	97.206	Astyanax_mexicanus
ENSCVAG00000010459	sf3b3	100	92.605	ENSBTAG00000010627	SF3B3	100	92.605	Bos_taurus
ENSCVAG00000010459	sf3b3	100	60.422	WBGene00019323	teg-4	100	60.422	Caenorhabditis_elegans
ENSCVAG00000010459	sf3b3	100	92.605	ENSCJAG00000014773	SF3B3	99	92.605	Callithrix_jacchus
ENSCVAG00000010459	sf3b3	100	92.687	ENSCAFG00000020151	SF3B3	100	92.687	Canis_familiaris
ENSCVAG00000010459	sf3b3	100	92.687	ENSCAFG00020020912	SF3B3	100	92.687	Canis_lupus_dingo
ENSCVAG00000010459	sf3b3	100	92.687	ENSCHIG00000019822	SF3B3	100	92.687	Capra_hircus
ENSCVAG00000010459	sf3b3	100	92.605	ENSTSYG00000007910	SF3B3	100	92.605	Carlito_syrichta
ENSCVAG00000010459	sf3b3	84	78.490	ENSCAPG00000001484	SF3B3	92	78.490	Cavia_aperea
ENSCVAG00000010459	sf3b3	100	91.290	ENSCPOG00000000586	SF3B3	100	91.290	Cavia_porcellus
ENSCVAG00000010459	sf3b3	100	92.605	ENSCCAG00000017736	SF3B3	100	92.605	Cebus_capucinus
ENSCVAG00000010459	sf3b3	100	92.605	ENSCATG00000036562	SF3B3	100	92.605	Cercocebus_atys
ENSCVAG00000010459	sf3b3	100	92.605	ENSCLAG00000003921	SF3B3	100	92.605	Chinchilla_lanigera
ENSCVAG00000010459	sf3b3	100	92.605	ENSCSAG00000004371	SF3B3	100	92.605	Chlorocebus_sabaeus
ENSCVAG00000010459	sf3b3	90	88.474	ENSCHOG00000001878	SF3B3	90	88.474	Choloepus_hoffmanni
ENSCVAG00000010459	sf3b3	100	92.276	ENSCPBG00000015853	SF3B3	100	92.276	Chrysemys_picta_bellii
ENSCVAG00000010459	sf3b3	100	79.721	ENSCING00000001342	-	100	79.721	Ciona_intestinalis
ENSCVAG00000010459	sf3b3	99	78.489	ENSCSAVG00000011454	-	100	78.489	Ciona_savignyi
ENSCVAG00000010459	sf3b3	100	89.236	ENSCANG00000042920	SF3B3	100	89.565	Colobus_angolensis_palliatus
ENSCVAG00000010459	sf3b3	100	92.523	ENSCGRG00001015908	Sf3b3	100	92.523	Cricetulus_griseus_chok1gshd
ENSCVAG00000010459	sf3b3	100	92.523	ENSCGRG00000010180	Sf3b3	100	92.523	Cricetulus_griseus_crigri
ENSCVAG00000010459	sf3b3	82	96.208	ENSCSEG00000014192	sf3b3	99	96.208	Cynoglossus_semilaevis
ENSCVAG00000010459	sf3b3	100	96.713	ENSDARG00000103553	sf3b3	100	96.713	Danio_rerio
ENSCVAG00000010459	sf3b3	85	92.575	ENSDNOG00000043626	SF3B3	100	92.575	Dasypus_novemcinctus
ENSCVAG00000010459	sf3b3	100	92.605	ENSDORG00000014176	Sf3b3	100	92.605	Dipodomys_ordii
ENSCVAG00000010459	sf3b3	100	74.898	FBgn0035162	Sf3b3	100	74.898	Drosophila_melanogaster
ENSCVAG00000010459	sf3b3	84	95.699	ENSETEG00000002729	SF3B3	84	95.699	Echinops_telfairi
ENSCVAG00000010459	sf3b3	100	86.196	ENSEBUG00000006117	sf3b3	100	86.196	Eptatretus_burgeri
ENSCVAG00000010459	sf3b3	100	92.687	ENSEASG00005013376	SF3B3	100	92.687	Equus_asinus_asinus
ENSCVAG00000010459	sf3b3	100	92.687	ENSECAG00000014053	SF3B3	100	92.687	Equus_caballus
ENSCVAG00000010459	sf3b3	93	92.456	ENSEEUG00000015611	SF3B3	93	92.456	Erinaceus_europaeus
ENSCVAG00000010459	sf3b3	100	95.328	ENSELUG00000015417	sf3b3	100	95.328	Esox_lucius
ENSCVAG00000010459	sf3b3	100	92.687	ENSFCAG00000009487	SF3B3	100	92.687	Felis_catus
ENSCVAG00000010459	sf3b3	100	92.440	ENSFALG00000007372	SF3B3	100	92.440	Ficedula_albicollis
ENSCVAG00000010459	sf3b3	100	92.605	ENSFDAG00000002608	SF3B3	100	92.605	Fukomys_damarensis
ENSCVAG00000010459	sf3b3	100	99.096	ENSFHEG00000017824	sf3b3	100	99.096	Fundulus_heteroclitus
ENSCVAG00000010459	sf3b3	100	93.268	ENSGMOG00000008139	sf3b3	100	93.268	Gadus_morhua
ENSCVAG00000010459	sf3b3	100	92.605	ENSGALG00000002531	SF3B3	100	92.605	Gallus_gallus
ENSCVAG00000010459	sf3b3	100	98.521	ENSGAFG00000015206	sf3b3	100	98.521	Gambusia_affinis
ENSCVAG00000010459	sf3b3	100	97.455	ENSGACG00000002646	sf3b3	100	97.455	Gasterosteus_aculeatus
ENSCVAG00000010459	sf3b3	96	92.400	ENSGAGG00000006746	SF3B3	97	92.400	Gopherus_agassizii
ENSCVAG00000010459	sf3b3	100	92.605	ENSGGOG00000003246	SF3B3	100	92.605	Gorilla_gorilla
ENSCVAG00000010459	sf3b3	92	90.795	ENSHBUG00000005960	sf3b3	99	90.795	Haplochromis_burtoni
ENSCVAG00000010459	sf3b3	100	92.605	ENSHGLG00000010135	SF3B3	100	92.605	Heterocephalus_glaber_female
ENSCVAG00000010459	sf3b3	100	90.511	ENSHGLG00100011148	SF3B3	100	90.511	Heterocephalus_glaber_male
ENSCVAG00000010459	sf3b3	100	97.535	ENSHCOG00000011981	sf3b3	100	97.535	Hippocampus_comes
ENSCVAG00000010459	sf3b3	100	97.206	ENSIPUG00000020435	sf3b3	100	97.206	Ictalurus_punctatus
ENSCVAG00000010459	sf3b3	100	92.605	ENSSTOG00000007065	SF3B3	100	92.605	Ictidomys_tridecemlineatus
ENSCVAG00000010459	sf3b3	100	92.605	ENSJJAG00000003948	Sf3b3	100	92.605	Jaculus_jaculus
ENSCVAG00000010459	sf3b3	100	95.974	ENSKMAG00000004066	sf3b3	99	98.036	Kryptolebias_marmoratus
ENSCVAG00000010459	sf3b3	100	97.781	ENSLBEG00000018302	sf3b3	100	97.781	Labrus_bergylta
ENSCVAG00000010459	sf3b3	98	89.784	ENSLACG00000012501	SF3B3	99	89.784	Latimeria_chalumnae
ENSCVAG00000010459	sf3b3	100	96.223	ENSLOCG00000007566	sf3b3	100	96.223	Lepisosteus_oculatus
ENSCVAG00000010459	sf3b3	100	92.687	ENSLAFG00000012219	SF3B3	100	92.687	Loxodonta_africana
ENSCVAG00000010459	sf3b3	100	92.605	ENSMFAG00000045487	SF3B3	100	92.605	Macaca_fascicularis
ENSCVAG00000010459	sf3b3	100	92.605	ENSMMUG00000017812	SF3B3	100	92.605	Macaca_mulatta
ENSCVAG00000010459	sf3b3	100	92.605	ENSMNEG00000033385	SF3B3	100	92.605	Macaca_nemestrina
ENSCVAG00000010459	sf3b3	100	89.071	ENSMLEG00000043891	SF3B3	100	89.071	Mandrillus_leucophaeus
ENSCVAG00000010459	sf3b3	100	98.028	ENSMAMG00000016837	sf3b3	100	98.028	Mastacembelus_armatus
ENSCVAG00000010459	sf3b3	89	94.820	ENSMZEG00005026015	sf3b3	99	94.820	Maylandia_zebra
ENSCVAG00000010459	sf3b3	100	97.781	ENSMZEG00005010836	sf3b3	100	97.781	Maylandia_zebra
ENSCVAG00000010459	sf3b3	100	92.605	ENSMGAG00000001597	SF3B3	100	92.605	Meleagris_gallopavo
ENSCVAG00000010459	sf3b3	81	76.030	ENSMAUG00000013618	Sf3b3	95	76.404	Mesocricetus_auratus
ENSCVAG00000010459	sf3b3	100	91.550	ENSMICG00000001363	SF3B3	100	91.550	Microcebus_murinus
ENSCVAG00000010459	sf3b3	100	92.523	ENSMOCG00000006108	Sf3b3	100	92.523	Microtus_ochrogaster
ENSCVAG00000010459	sf3b3	89	95.467	ENSMMOG00000002598	sf3b3	97	95.467	Mola_mola
ENSCVAG00000010459	sf3b3	100	88.588	ENSMODG00000014363	SF3B3	100	88.588	Monodelphis_domestica
ENSCVAG00000010459	sf3b3	100	97.371	ENSMALG00000008014	sf3b3	100	97.371	Monopterus_albus
ENSCVAG00000010459	sf3b3	100	92.523	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.523	Mus_caroli
ENSCVAG00000010459	sf3b3	100	92.523	ENSMUSG00000033732	Sf3b3	100	92.523	Mus_musculus
ENSCVAG00000010459	sf3b3	100	92.523	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.523	Mus_spretus
ENSCVAG00000010459	sf3b3	100	92.687	ENSMPUG00000010277	SF3B3	100	92.687	Mustela_putorius_furo
ENSCVAG00000010459	sf3b3	100	92.523	ENSMLUG00000014607	SF3B3	100	92.523	Myotis_lucifugus
ENSCVAG00000010459	sf3b3	100	92.605	ENSNGAG00000021903	Sf3b3	100	92.605	Nannospalax_galili
ENSCVAG00000010459	sf3b3	83	94.286	ENSNBRG00000007197	sf3b3	99	94.286	Neolamprologus_brichardi
ENSCVAG00000010459	sf3b3	100	91.133	ENSNLEG00000016127	SF3B3	100	91.133	Nomascus_leucogenys
ENSCVAG00000010459	sf3b3	92	88.606	ENSMEUG00000004479	SF3B3	94	88.606	Notamacropus_eugenii
ENSCVAG00000010459	sf3b3	98	89.522	ENSOPRG00000009847	SF3B3	100	89.522	Ochotona_princeps
ENSCVAG00000010459	sf3b3	100	92.605	ENSODEG00000014154	SF3B3	100	92.605	Octodon_degus
ENSCVAG00000010459	sf3b3	100	97.864	ENSONIG00000011198	sf3b3	100	97.864	Oreochromis_niloticus
ENSCVAG00000010459	sf3b3	100	92.769	ENSOANG00000001161	-	100	92.769	Ornithorhynchus_anatinus
ENSCVAG00000010459	sf3b3	100	90.633	ENSOCUG00000004139	SF3B3	100	90.633	Oryctolagus_cuniculus
ENSCVAG00000010459	sf3b3	100	97.453	ENSORLG00000013472	sf3b3	100	97.453	Oryzias_latipes
ENSCVAG00000010459	sf3b3	100	97.453	ENSORLG00020017473	sf3b3	100	97.453	Oryzias_latipes_hni
ENSCVAG00000010459	sf3b3	100	97.617	ENSORLG00015007710	sf3b3	100	97.617	Oryzias_latipes_hsok
ENSCVAG00000010459	sf3b3	100	97.206	ENSOMEG00000014483	sf3b3	100	97.206	Oryzias_melastigma
ENSCVAG00000010459	sf3b3	100	92.295	ENSOGAG00000016051	SF3B3	100	92.295	Otolemur_garnettii
ENSCVAG00000010459	sf3b3	100	92.459	ENSOARG00000004816	SF3B3	100	92.459	Ovis_aries
ENSCVAG00000010459	sf3b3	100	92.605	ENSPPAG00000026807	SF3B3	100	92.605	Pan_paniscus
ENSCVAG00000010459	sf3b3	100	92.687	ENSPPRG00000001686	SF3B3	100	92.687	Panthera_pardus
ENSCVAG00000010459	sf3b3	89	90.064	ENSPTIG00000020382	SF3B3	100	90.064	Panthera_tigris_altaica
ENSCVAG00000010459	sf3b3	100	92.605	ENSPTRG00000008308	SF3B3	100	92.605	Pan_troglodytes
ENSCVAG00000010459	sf3b3	100	92.605	ENSPANG00000024075	SF3B3	100	92.605	Papio_anubis
ENSCVAG00000010459	sf3b3	100	96.467	ENSPKIG00000002712	sf3b3	100	96.467	Paramormyrops_kingsleyae
ENSCVAG00000010459	sf3b3	89	92.732	ENSPSIG00000002232	SF3B3	100	92.732	Pelodiscus_sinensis
ENSCVAG00000010459	sf3b3	100	92.523	ENSPEMG00000008603	Sf3b3	100	92.523	Peromyscus_maniculatus_bairdii
ENSCVAG00000010459	sf3b3	100	90.222	ENSPMAG00000001793	sf3b3	100	90.222	Petromyzon_marinus
ENSCVAG00000010459	sf3b3	100	92.769	ENSPCIG00000014927	SF3B3	100	92.769	Phascolarctos_cinereus
ENSCVAG00000010459	sf3b3	100	98.932	ENSPFOG00000015516	sf3b3	100	98.932	Poecilia_formosa
ENSCVAG00000010459	sf3b3	100	98.932	ENSPLAG00000014330	sf3b3	100	98.932	Poecilia_latipinna
ENSCVAG00000010459	sf3b3	100	99.014	ENSPMEG00000019856	sf3b3	100	99.014	Poecilia_mexicana
ENSCVAG00000010459	sf3b3	81	98.780	ENSPREG00000019669	sf3b3	97	98.780	Poecilia_reticulata
ENSCVAG00000010459	sf3b3	95	92.502	ENSPPYG00000007539	SF3B3	100	92.502	Pongo_abelii
ENSCVAG00000010459	sf3b3	100	71.980	ENSPCAG00000002623	SF3B3	100	71.980	Procavia_capensis
ENSCVAG00000010459	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSCVAG00000010459	sf3b3	100	92.605	ENSPVAG00000000684	SF3B3	100	92.605	Pteropus_vampyrus
ENSCVAG00000010459	sf3b3	100	97.699	ENSPNYG00000003528	sf3b3	100	97.699	Pundamilia_nyererei
ENSCVAG00000010459	sf3b3	100	96.878	ENSPNAG00000015419	sf3b3	100	96.878	Pygocentrus_nattereri
ENSCVAG00000010459	sf3b3	100	92.523	ENSRNOG00000017724	Sf3b3	100	92.523	Rattus_norvegicus
ENSCVAG00000010459	sf3b3	100	92.605	ENSRBIG00000021904	SF3B3	100	92.605	Rhinopithecus_bieti
ENSCVAG00000010459	sf3b3	100	92.605	ENSRROG00000045703	SF3B3	100	92.605	Rhinopithecus_roxellana
ENSCVAG00000010459	sf3b3	100	92.605	ENSSBOG00000029156	SF3B3	100	92.605	Saimiri_boliviensis_boliviensis
ENSCVAG00000010459	sf3b3	100	92.769	ENSSHAG00000000372	SF3B3	100	92.769	Sarcophilus_harrisii
ENSCVAG00000010459	sf3b3	100	96.631	ENSSFOG00015012877	sf3b3	100	96.631	Scleropages_formosus
ENSCVAG00000010459	sf3b3	100	97.453	ENSSMAG00000014386	sf3b3	100	97.453	Scophthalmus_maximus
ENSCVAG00000010459	sf3b3	100	97.864	ENSSDUG00000021201	sf3b3	100	97.864	Seriola_dumerili
ENSCVAG00000010459	sf3b3	100	97.946	ENSSLDG00000017532	sf3b3	100	97.946	Seriola_lalandi_dorsalis
ENSCVAG00000010459	sf3b3	93	92.647	ENSSARG00000006917	SF3B3	93	92.647	Sorex_araneus
ENSCVAG00000010459	sf3b3	100	92.440	ENSSPUG00000006253	SF3B3	100	92.440	Sphenodon_punctatus
ENSCVAG00000010459	sf3b3	100	90.222	ENSSPAG00000003125	sf3b3	100	90.222	Stegastes_partitus
ENSCVAG00000010459	sf3b3	100	92.687	ENSSSCG00000025323	SF3B3	100	92.687	Sus_scrofa
ENSCVAG00000010459	sf3b3	100	92.611	ENSTGUG00000006082	SF3B3	100	92.611	Taeniopygia_guttata
ENSCVAG00000010459	sf3b3	89	97.059	ENSTNIG00000004857	sf3b3	100	97.059	Tetraodon_nigroviridis
ENSCVAG00000010459	sf3b3	93	78.433	ENSTBEG00000002946	SF3B3	100	78.433	Tupaia_belangeri
ENSCVAG00000010459	sf3b3	100	91.865	ENSTTRG00000005855	SF3B3	100	91.865	Tursiops_truncatus
ENSCVAG00000010459	sf3b3	100	92.687	ENSUAMG00000006780	SF3B3	100	92.687	Ursus_americanus
ENSCVAG00000010459	sf3b3	100	92.687	ENSUMAG00000017757	SF3B3	100	92.687	Ursus_maritimus
ENSCVAG00000010459	sf3b3	100	77.568	ENSVPAG00000003202	SF3B3	100	77.568	Vicugna_pacos
ENSCVAG00000010459	sf3b3	100	92.687	ENSVVUG00000017922	SF3B3	100	92.687	Vulpes_vulpes
ENSCVAG00000010459	sf3b3	100	92.851	ENSXETG00000032869	SF3B3	100	92.851	Xenopus_tropicalis
ENSCVAG00000010459	sf3b3	77	98.726	ENSXCOG00000013628	sf3b3	97	98.726	Xiphophorus_couchianus
ENSCVAG00000010459	sf3b3	100	98.767	ENSXMAG00000006334	sf3b3	100	98.767	Xiphophorus_maculatus