EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010493 (Gene tree)
Gene ID: 107089252
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15158 bases
Position: chrKL652744.1:819100-834257
Accession: 107089252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025582	RRM_1	PF00076.22	1.1e-57	1	4
ENSCVAP00000025582	RRM_1	PF00076.22	1.1e-57	2	4
ENSCVAP00000025582	RRM_1	PF00076.22	1.1e-57	3	4
ENSCVAP00000025582	RRM_1	PF00076.22	1.1e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001271	-	3595	XM_015381928	ENSCVAP00000025582	767 (aa)	XP_015237414	UPI0007428F42

Gene Model

Click here to download ENSCVAG00000010493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010493	rbm28	82	65.000	ENSG00000106344	RBM28	100	48.529	Homo_sapiens
ENSCVAG00000010493	rbm28	57	75.399	ENSAPOG00000015512	rbm28	59	74.889	Acanthochromis_polyacanthus
ENSCVAG00000010493	rbm28	98	57.447	ENSAMEG00000004776	RBM28	66	57.447	Ailuropoda_melanoleuca
ENSCVAG00000010493	rbm28	55	73.176	ENSACIG00000023153	rbm28	91	73.412	Amphilophus_citrinellus
ENSCVAG00000010493	rbm28	57	76.310	ENSAOCG00000000462	rbm28	58	75.778	Amphiprion_ocellaris
ENSCVAG00000010493	rbm28	57	76.082	ENSAPEG00000012996	rbm28	59	75.556	Amphiprion_percula
ENSCVAG00000010493	rbm28	59	67.292	ENSATEG00000001672	rbm28	61	67.292	Anabas_testudineus
ENSCVAG00000010493	rbm28	90	65.000	ENSANAG00000033922	RBM28	94	54.989	Aotus_nancymaae
ENSCVAG00000010493	rbm28	99	66.580	ENSACLG00000025024	rbm28	59	76.821	Astatotilapia_calliptera
ENSCVAG00000010493	rbm28	58	60.899	ENSAMXG00000000763	rbm28	99	60.899	Astyanax_mexicanus
ENSCVAG00000010493	rbm28	90	65.000	ENSBTAG00000017001	RBM28	80	65.000	Bos_taurus
ENSCVAG00000010493	rbm28	90	65.000	ENSCJAG00000017731	RBM28	85	54.324	Callithrix_jacchus
ENSCVAG00000010493	rbm28	99	49.180	ENSCAFG00000001667	RBM28	58	54.746	Canis_familiaris
ENSCVAG00000010493	rbm28	99	49.180	ENSCAFG00020021648	RBM28	58	54.746	Canis_lupus_dingo
ENSCVAG00000010493	rbm28	62	53.556	ENSCHIG00000014146	RBM28	59	54.911	Capra_hircus
ENSCVAG00000010493	rbm28	65	62.500	ENSTSYG00000002892	RBM28	96	54.767	Carlito_syrichta
ENSCVAG00000010493	rbm28	99	49.814	ENSCPOG00000006253	RBM28	58	54.803	Cavia_porcellus
ENSCVAG00000010493	rbm28	79	65.000	ENSCCAG00000035105	RBM28	86	54.989	Cebus_capucinus
ENSCVAG00000010493	rbm28	99	50.128	ENSCATG00000040497	RBM28	87	55.111	Cercocebus_atys
ENSCVAG00000010493	rbm28	61	54.316	ENSCLAG00000003707	RBM28	61	56.674	Chinchilla_lanigera
ENSCVAG00000010493	rbm28	99	48.120	ENSCSAG00000010161	RBM28	58	55.111	Chlorocebus_sabaeus
ENSCVAG00000010493	rbm28	56	54.839	ENSCHOG00000001994	-	63	54.839	Choloepus_hoffmanni
ENSCVAG00000010493	rbm28	52	49.448	ENSCPBG00000018088	RBM28	88	50.952	Chrysemys_picta_bellii
ENSCVAG00000010493	rbm28	88	51.175	ENSCANG00000038397	RBM28	82	63.380	Colobus_angolensis_palliatus
ENSCVAG00000010493	rbm28	64	52.227	ENSCGRG00001021278	Rbm28	56	54.767	Cricetulus_griseus_chok1gshd
ENSCVAG00000010493	rbm28	64	52.227	ENSCGRG00000005098	Rbm28	58	54.767	Cricetulus_griseus_crigri
ENSCVAG00000010493	rbm28	99	62.387	ENSCSEG00000004212	rbm28	60	72.406	Cynoglossus_semilaevis
ENSCVAG00000010493	rbm28	82	60.225	ENSDARG00000025332	rbm28	75	60.225	Danio_rerio
ENSCVAG00000010493	rbm28	64	51.815	ENSDNOG00000001124	RBM28	58	54.911	Dasypus_novemcinctus
ENSCVAG00000010493	rbm28	79	49.904	ENSDORG00000004184	Rbm28	89	54.405	Dipodomys_ordii
ENSCVAG00000010493	rbm28	55	50.820	ENSETEG00000007130	RBM28	55	50.820	Echinops_telfairi
ENSCVAG00000010493	rbm28	64	51.297	ENSEASG00005008528	RBM28	57	55.432	Equus_asinus_asinus
ENSCVAG00000010493	rbm28	64	51.297	ENSECAG00000007745	RBM28	57	55.432	Equus_caballus
ENSCVAG00000010493	rbm28	99	47.059	ENSEEUG00000002389	RBM28	85	60.748	Erinaceus_europaeus
ENSCVAG00000010493	rbm28	99	57.107	ENSELUG00000020602	rbm28	59	63.499	Esox_lucius
ENSCVAG00000010493	rbm28	99	50.514	ENSFCAG00000000946	RBM28	79	65.000	Felis_catus
ENSCVAG00000010493	rbm28	99	49.310	ENSFDAG00000010169	RBM28	59	55.531	Fukomys_damarensis
ENSCVAG00000010493	rbm28	59	80.931	ENSGAFG00000004802	rbm28	99	80.931	Gambusia_affinis
ENSCVAG00000010493	rbm28	57	73.529	ENSGACG00000012612	rbm28	75	73.009	Gasterosteus_aculeatus
ENSCVAG00000010493	rbm28	72	62.032	ENSGAGG00000008873	RBM28	98	62.032	Gopherus_agassizii
ENSCVAG00000010493	rbm28	95	47.098	ENSGGOG00000004644	RBM28	59	55.111	Gorilla_gorilla
ENSCVAG00000010493	rbm28	94	67.308	ENSHBUG00000009611	rbm28	56	78.240	Haplochromis_burtoni
ENSCVAG00000010493	rbm28	99	49.551	ENSHGLG00000005409	RBM28	59	54.066	Heterocephalus_glaber_female
ENSCVAG00000010493	rbm28	99	49.551	ENSHGLG00100016458	RBM28	59	54.066	Heterocephalus_glaber_male
ENSCVAG00000010493	rbm28	81	56.614	ENSHCOG00000010597	rbm28	90	55.405	Hippocampus_comes
ENSCVAG00000010493	rbm28	56	50.117	ENSIPUG00000007103	rbm28	81	50.351	Ictalurus_punctatus
ENSCVAG00000010493	rbm28	66	51.252	ENSSTOG00000002169	RBM28	57	55.188	Ictidomys_tridecemlineatus
ENSCVAG00000010493	rbm28	79	57.459	ENSJJAG00000022400	Rbm28	85	58.011	Jaculus_jaculus
ENSCVAG00000010493	rbm28	58	74.107	ENSKMAG00000013348	rbm28	59	74.107	Kryptolebias_marmoratus
ENSCVAG00000010493	rbm28	58	71.239	ENSLBEG00000012998	rbm28	57	71.082	Labrus_bergylta
ENSCVAG00000010493	rbm28	99	46.468	ENSLOCG00000015541	rbm28	75	60.802	Lepisosteus_oculatus
ENSCVAG00000010493	rbm28	99	49.872	ENSLAFG00000010717	RBM28	58	54.911	Loxodonta_africana
ENSCVAG00000010493	rbm28	99	49.744	ENSMFAG00000031036	RBM28	87	55.333	Macaca_fascicularis
ENSCVAG00000010493	rbm28	68	65.000	ENSMMUG00000007250	RBM28	87	55.333	Macaca_mulatta
ENSCVAG00000010493	rbm28	99	49.749	ENSMNEG00000036970	RBM28	86	55.333	Macaca_nemestrina
ENSCVAG00000010493	rbm28	99	67.183	ENSMAMG00000008525	rbm28	59	77.162	Mastacembelus_armatus
ENSCVAG00000010493	rbm28	93	65.369	ENSMZEG00005019625	rbm28	64	76.821	Maylandia_zebra
ENSCVAG00000010493	rbm28	99	49.619	ENSMAUG00000002263	Rbm28	56	54.222	Mesocricetus_auratus
ENSCVAG00000010493	rbm28	65	51.587	ENSMICG00000000107	RBM28	61	55.361	Microcebus_murinus
ENSCVAG00000010493	rbm28	99	48.734	ENSMOCG00000014615	Rbm28	59	54.241	Microtus_ochrogaster
ENSCVAG00000010493	rbm28	57	66.591	ENSMMOG00000008600	rbm28	92	66.591	Mola_mola
ENSCVAG00000010493	rbm28	61	54.852	ENSMODG00000015151	RBM28	58	56.347	Monodelphis_domestica
ENSCVAG00000010493	rbm28	99	64.812	ENSMALG00000006419	rbm28	99	64.812	Monopterus_albus
ENSCVAG00000010493	rbm28	99	49.806	MGP_CAROLIEiJ_G0028162	Rbm28	58	53.982	Mus_caroli
ENSCVAG00000010493	rbm28	99	49.936	ENSMUSG00000029701	Rbm28	58	54.767	Mus_musculus
ENSCVAG00000010493	rbm28	99	50.255	MGP_PahariEiJ_G0021920	Rbm28	59	55.876	Mus_pahari
ENSCVAG00000010493	rbm28	99	49.936	MGP_SPRETEiJ_G0029162	Rbm28	58	54.767	Mus_spretus
ENSCVAG00000010493	rbm28	99	49.361	ENSMPUG00000006511	RBM28	58	55.705	Mustela_putorius_furo
ENSCVAG00000010493	rbm28	66	51.267	ENSMLUG00000002186	RBM28	57	55.481	Myotis_lucifugus
ENSCVAG00000010493	rbm28	99	47.126	ENSNGAG00000017946	-	57	51.474	Nannospalax_galili
ENSCVAG00000010493	rbm28	82	65.000	ENSNLEG00000012307	RBM28	85	55.507	Nomascus_leucogenys
ENSCVAG00000010493	rbm28	83	56.213	ENSMEUG00000009611	RBM28	83	56.886	Notamacropus_eugenii
ENSCVAG00000010493	rbm28	72	57.672	ENSODEG00000013217	-	83	56.500	Octodon_degus
ENSCVAG00000010493	rbm28	99	48.082	ENSODEG00000003213	-	57	53.478	Octodon_degus
ENSCVAG00000010493	rbm28	58	76.821	ENSONIG00000014924	rbm28	59	76.940	Oreochromis_niloticus
ENSCVAG00000010493	rbm28	99	47.698	ENSOANG00000000815	-	59	49.781	Ornithorhynchus_anatinus
ENSCVAG00000010493	rbm28	64	52.200	ENSOCUG00000003009	RBM28	57	55.211	Oryctolagus_cuniculus
ENSCVAG00000010493	rbm28	100	64.653	ENSORLG00000009636	rbm28	59	73.673	Oryzias_latipes
ENSCVAG00000010493	rbm28	100	65.629	ENSORLG00020002123	rbm28	100	61.394	Oryzias_latipes_hni
ENSCVAG00000010493	rbm28	86	72.222	ENSORLG00015015030	rbm28	100	72.222	Oryzias_latipes_hsok
ENSCVAG00000010493	rbm28	58	74.558	ENSOMEG00000007801	rbm28	60	74.614	Oryzias_melastigma
ENSCVAG00000010493	rbm28	83	62.500	ENSOGAG00000006011	RBM28	77	62.500	Otolemur_garnettii
ENSCVAG00000010493	rbm28	99	49.434	ENSOARG00000002547	RBM28	59	54.405	Ovis_aries
ENSCVAG00000010493	rbm28	82	65.000	ENSPPAG00000041730	RBM28	85	55.111	Pan_paniscus
ENSCVAG00000010493	rbm28	99	50.192	ENSPPRG00000004420	RBM28	79	65.000	Panthera_pardus
ENSCVAG00000010493	rbm28	99	50.192	ENSPTIG00000008550	RBM28	79	65.000	Panthera_tigris_altaica
ENSCVAG00000010493	rbm28	82	65.000	ENSPTRG00000019659	RBM28	85	55.333	Pan_troglodytes
ENSCVAG00000010493	rbm28	99	49.129	ENSPANG00000022295	RBM28	87	55.333	Papio_anubis
ENSCVAG00000010493	rbm28	100	52.340	ENSPKIG00000023453	rbm28	62	56.996	Paramormyrops_kingsleyae
ENSCVAG00000010493	rbm28	83	66.822	ENSPMGG00000012840	rbm28	99	66.822	Periophthalmus_magnuspinnatus
ENSCVAG00000010493	rbm28	99	49.936	ENSPCIG00000012810	RBM28	59	55.257	Phascolarctos_cinereus
ENSCVAG00000010493	rbm28	99	77.083	ENSPFOG00000018209	rbm28	59	82.705	Poecilia_formosa
ENSCVAG00000010493	rbm28	99	77.094	ENSPLAG00000016078	rbm28	57	82.774	Poecilia_latipinna
ENSCVAG00000010493	rbm28	99	77.113	ENSPMEG00000004292	rbm28	59	82.743	Poecilia_mexicana
ENSCVAG00000010493	rbm28	99	76.042	ENSPREG00000014287	rbm28	76	82.405	Poecilia_reticulata
ENSCVAG00000010493	rbm28	99	47.990	ENSPPYG00000017975	RBM28	58	55.111	Pongo_abelii
ENSCVAG00000010493	rbm28	73	51.397	ENSPCAG00000008223	RBM28	83	51.233	Procavia_capensis
ENSCVAG00000010493	rbm28	90	65.000	ENSPCOG00000016797	RBM28	77	65.000	Propithecus_coquereli
ENSCVAG00000010493	rbm28	74	61.927	ENSPVAG00000005443	RBM28	69	64.677	Pteropus_vampyrus
ENSCVAG00000010493	rbm28	99	67.228	ENSPNYG00000014003	rbm28	59	77.263	Pundamilia_nyererei
ENSCVAG00000010493	rbm28	99	50.000	ENSRNOG00000005468	Rbm28	58	55.234	Rattus_norvegicus
ENSCVAG00000010493	rbm28	68	65.000	ENSRBIG00000033990	RBM28	85	54.889	Rhinopithecus_bieti
ENSCVAG00000010493	rbm28	99	49.495	ENSRROG00000040747	RBM28	85	55.111	Rhinopithecus_roxellana
ENSCVAG00000010493	rbm28	88	44.286	ENSSBOG00000012308	RBM28	73	56.604	Saimiri_boliviensis_boliviensis
ENSCVAG00000010493	rbm28	96	48.871	ENSSHAG00000017017	RBM28	60	55.353	Sarcophilus_harrisii
ENSCVAG00000010493	rbm28	98	54.617	ENSSFOG00015001231	rbm28	60	60.403	Scleropages_formosus
ENSCVAG00000010493	rbm28	59	67.621	ENSSMAG00000003885	rbm28	91	67.841	Scophthalmus_maximus
ENSCVAG00000010493	rbm28	58	76.159	ENSSDUG00000014270	rbm28	89	76.159	Seriola_dumerili
ENSCVAG00000010493	rbm28	99	67.183	ENSSLDG00000020099	rbm28	59	75.276	Seriola_lalandi_dorsalis
ENSCVAG00000010493	rbm28	76	58.355	ENSSARG00000008303	RBM28	80	56.858	Sorex_araneus
ENSCVAG00000010493	rbm28	67	55.696	ENSSPUG00000000838	RBM28	92	55.696	Sphenodon_punctatus
ENSCVAG00000010493	rbm28	57	74.492	ENSSPAG00000023305	rbm28	62	74.834	Stegastes_partitus
ENSCVAG00000010493	rbm28	99	49.182	ENSSSCG00000031847	RBM28	58	55.459	Sus_scrofa
ENSCVAG00000010493	rbm28	99	60.637	ENSTRUG00000013311	rbm28	58	66.957	Takifugu_rubripes
ENSCVAG00000010493	rbm28	79	55.873	ENSTBEG00000012749	RBM28	71	54.167	Tupaia_belangeri
ENSCVAG00000010493	rbm28	99	50.064	ENSTTRG00000013647	RBM28	59	54.818	Tursiops_truncatus
ENSCVAG00000010493	rbm28	99	47.402	ENSUAMG00000006949	RBM28	84	59.024	Ursus_americanus
ENSCVAG00000010493	rbm28	99	49.687	ENSUMAG00000005997	RBM28	58	55.481	Ursus_maritimus
ENSCVAG00000010493	rbm28	89	45.161	ENSVPAG00000008304	RBM28	74	63.551	Vicugna_pacos
ENSCVAG00000010493	rbm28	99	49.182	ENSVVUG00000007270	RBM28	58	55.188	Vulpes_vulpes
ENSCVAG00000010493	rbm28	99	48.402	ENSXETG00000009271	rbm28	59	53.247	Xenopus_tropicalis
ENSCVAG00000010493	rbm28	62	74.105	ENSXCOG00000020357	rbm28	92	77.060	Xiphophorus_couchianus
ENSCVAG00000010493	rbm28	99	77.778	ENSXMAG00000004415	rbm28	59	81.920	Xiphophorus_maculatus