EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010502 (Gene tree)
Gene ID: 107100077
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 21997 bases
Position: chrKL653434.1:258494-280490
Accession: 107100077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008628	Snurportin1	PF11538.8	1.3e-16	1	1
ENSCVAP00000025581	Snurportin1	PF11538.8	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001304	-	1068	-	ENSCVAP00000008628	355 (aa)	-	-
ENSCVAT00000001293	-	2566	XM_015398434	ENSCVAP00000025581	371 (aa)	XP_015253920	UPI000742B7CA

Gene Model

Click here to download ENSCVAG00000010502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010502	snupn	94	64.507	ENSG00000169371	SNUPN	100	73.016	Homo_sapiens
ENSCVAG00000010502	snupn	100	86.898	ENSAPOG00000016953	snupn	100	86.898	Acanthochromis_polyacanthus
ENSCVAG00000010502	snupn	94	63.739	ENSAMEG00000008291	SNUPN	94	63.842	Ailuropoda_melanoleuca
ENSCVAG00000010502	snupn	100	84.533	ENSACIG00000012409	snupn	100	84.533	Amphilophus_citrinellus
ENSCVAG00000010502	snupn	100	86.631	ENSAOCG00000018096	snupn	100	86.631	Amphiprion_ocellaris
ENSCVAG00000010502	snupn	100	87.166	ENSAPEG00000008834	snupn	100	87.166	Amphiprion_percula
ENSCVAG00000010502	snupn	100	86.933	ENSATEG00000021019	snupn	100	86.933	Anabas_testudineus
ENSCVAG00000010502	snupn	94	65.429	ENSANAG00000025568	SNUPN	95	66.097	Aotus_nancymaae
ENSCVAG00000010502	snupn	100	83.378	ENSACLG00000025155	snupn	100	84.800	Astatotilapia_calliptera
ENSCVAG00000010502	snupn	99	76.087	ENSAMXG00000038311	snupn	100	76.087	Astyanax_mexicanus
ENSCVAG00000010502	snupn	94	63.944	ENSBTAG00000021293	SNUPN	95	64.225	Bos_taurus
ENSCVAG00000010502	snupn	88	41.641	WBGene00017746	F23F1.5	95	41.641	Caenorhabditis_elegans
ENSCVAG00000010502	snupn	94	64.857	ENSCJAG00000003005	SNUPN	95	65.527	Callithrix_jacchus
ENSCVAG00000010502	snupn	94	63.429	ENSCAFG00000018035	SNUPN	95	63.818	Canis_familiaris
ENSCVAG00000010502	snupn	94	63.662	ENSCHIG00000018047	SNUPN	95	63.662	Capra_hircus
ENSCVAG00000010502	snupn	94	63.380	ENSTSYG00000037224	SNUPN	95	63.483	Carlito_syrichta
ENSCVAG00000010502	snupn	94	58.380	ENSCAPG00000005061	SNUPN	96	58.380	Cavia_aperea
ENSCVAG00000010502	snupn	94	65.169	ENSCPOG00000034772	SNUPN	96	65.169	Cavia_porcellus
ENSCVAG00000010502	snupn	94	65.429	ENSCCAG00000016169	-	95	66.097	Cebus_capucinus
ENSCVAG00000010502	snupn	94	63.842	ENSCATG00000039783	SNUPN	95	64.507	Cercocebus_atys
ENSCVAG00000010502	snupn	94	64.205	ENSCLAG00000016968	SNUPN	95	65.254	Chinchilla_lanigera
ENSCVAG00000010502	snupn	94	62.712	ENSCSAG00000019246	-	95	63.380	Chlorocebus_sabaeus
ENSCVAG00000010502	snupn	94	63.842	ENSCSAG00000014576	-	85	64.507	Chlorocebus_sabaeus
ENSCVAG00000010502	snupn	94	50.565	ENSCHOG00000005403	SNUPN	95	51.268	Choloepus_hoffmanni
ENSCVAG00000010502	snupn	94	65.449	ENSCPBG00000022172	SNUPN	91	65.449	Chrysemys_picta_bellii
ENSCVAG00000010502	snupn	94	64.124	ENSCANG00000029707	SNUPN	95	64.789	Colobus_angolensis_palliatus
ENSCVAG00000010502	snupn	94	64.407	ENSCGRG00001004622	Snupn	96	64.407	Cricetulus_griseus_chok1gshd
ENSCVAG00000010502	snupn	94	64.407	ENSCGRG00000002515	Snupn	96	64.407	Cricetulus_griseus_crigri
ENSCVAG00000010502	snupn	100	78.075	ENSCSEG00000003160	snupn	89	78.075	Cynoglossus_semilaevis
ENSCVAG00000010502	snupn	99	72.995	ENSDARG00000008395	snupn	99	73.046	Danio_rerio
ENSCVAG00000010502	snupn	94	62.000	ENSDNOG00000044304	SNUPN	90	62.393	Dasypus_novemcinctus
ENSCVAG00000010502	snupn	94	63.380	ENSDORG00000009051	Snupn	95	63.662	Dipodomys_ordii
ENSCVAG00000010502	snupn	94	51.275	ENSETEG00000013792	SNUPN	95	51.275	Echinops_telfairi
ENSCVAG00000010502	snupn	96	54.133	ENSEBUG00000006682	snupn	96	54.133	Eptatretus_burgeri
ENSCVAG00000010502	snupn	94	63.842	ENSEASG00005015697	SNUPN	92	64.507	Equus_asinus_asinus
ENSCVAG00000010502	snupn	95	63.408	ENSECAG00000017726	SNUPN	96	64.067	Equus_caballus
ENSCVAG00000010502	snupn	65	64.804	ENSEEUG00000000981	-	65	65.556	Erinaceus_europaeus
ENSCVAG00000010502	snupn	99	76.364	ENSELUG00000023305	snupn	99	76.883	Esox_lucius
ENSCVAG00000010502	snupn	94	64.306	ENSFCAG00000040981	SNUPN	95	64.407	Felis_catus
ENSCVAG00000010502	snupn	94	64.689	ENSFDAG00000011599	SNUPN	96	64.689	Fukomys_damarensis
ENSCVAG00000010502	snupn	100	87.701	ENSFHEG00000017627	snupn	100	87.701	Fundulus_heteroclitus
ENSCVAG00000010502	snupn	94	79.656	ENSGMOG00000009272	snupn	100	80.516	Gadus_morhua
ENSCVAG00000010502	snupn	90	60.174	ENSGALG00000029537	SNUPN	96	59.834	Gallus_gallus
ENSCVAG00000010502	snupn	100	86.022	ENSGAFG00000004954	snupn	100	86.022	Gambusia_affinis
ENSCVAG00000010502	snupn	100	81.941	ENSGACG00000007450	snupn	100	86.533	Gasterosteus_aculeatus
ENSCVAG00000010502	snupn	94	65.266	ENSGAGG00000022470	SNUPN	95	65.546	Gopherus_agassizii
ENSCVAG00000010502	snupn	56	63.492	ENSGGOG00000004581	-	92	63.492	Gorilla_gorilla
ENSCVAG00000010502	snupn	100	83.957	ENSHBUG00000006950	snupn	100	84.800	Haplochromis_burtoni
ENSCVAG00000010502	snupn	94	64.306	ENSHGLG00000000536	SNUPN	96	65.254	Heterocephalus_glaber_female
ENSCVAG00000010502	snupn	94	64.306	ENSHGLG00100016161	SNUPN	96	65.254	Heterocephalus_glaber_male
ENSCVAG00000010502	snupn	99	78.780	ENSHCOG00000007262	snupn	99	80.371	Hippocampus_comes
ENSCVAG00000010502	snupn	94	78.223	ENSIPUG00000014460	Snupn	96	78.313	Ictalurus_punctatus
ENSCVAG00000010502	snupn	94	63.456	ENSSTOG00000005904	SNUPN	95	64.124	Ictidomys_tridecemlineatus
ENSCVAG00000010502	snupn	100	78.495	ENSKMAG00000009957	snupn	100	78.495	Kryptolebias_marmoratus
ENSCVAG00000010502	snupn	100	84.252	ENSLBEG00000020694	snupn	100	85.450	Labrus_bergylta
ENSCVAG00000010502	snupn	94	64.103	ENSLACG00000015801	SNUPN	95	66.097	Latimeria_chalumnae
ENSCVAG00000010502	snupn	97	76.177	ENSLOCG00000015064	snupn	98	76.177	Lepisosteus_oculatus
ENSCVAG00000010502	snupn	94	63.559	ENSLAFG00000004422	SNUPN	95	64.225	Loxodonta_africana
ENSCVAG00000010502	snupn	94	51.479	ENSMFAG00000003706	SNUPN	94	62.069	Macaca_fascicularis
ENSCVAG00000010502	snupn	94	64.124	ENSMMUG00000004784	SNUPN	95	64.789	Macaca_mulatta
ENSCVAG00000010502	snupn	94	59.322	ENSMLEG00000041966	SNUPN	94	59.322	Mandrillus_leucophaeus
ENSCVAG00000010502	snupn	100	86.631	ENSMAMG00000023109	snupn	100	86.631	Mastacembelus_armatus
ENSCVAG00000010502	snupn	100	83.646	ENSMZEG00005010806	snupn	100	85.067	Maylandia_zebra
ENSCVAG00000010502	snupn	94	64.972	ENSMAUG00000020426	Snupn	96	64.972	Mesocricetus_auratus
ENSCVAG00000010502	snupn	94	63.662	ENSMICG00000016438	SNUPN	95	63.944	Microcebus_murinus
ENSCVAG00000010502	snupn	94	64.407	ENSMOCG00000014238	Snupn	96	64.407	Microtus_ochrogaster
ENSCVAG00000010502	snupn	100	86.133	ENSMMOG00000001321	snupn	100	86.133	Mola_mola
ENSCVAG00000010502	snupn	94	62.778	ENSMODG00000008852	SNUPN	95	62.778	Monodelphis_domestica
ENSCVAG00000010502	snupn	100	81.941	ENSMALG00000015058	snupn	100	81.941	Monopterus_albus
ENSCVAG00000010502	snupn	95	64.525	MGP_CAROLIEiJ_G0032259	Snupn	97	64.525	Mus_caroli
ENSCVAG00000010502	snupn	95	64.246	ENSMUSG00000055334	Snupn	97	64.246	Mus_musculus
ENSCVAG00000010502	snupn	94	64.972	MGP_PahariEiJ_G0015126	Snupn	96	64.972	Mus_pahari
ENSCVAG00000010502	snupn	95	64.246	MGP_SPRETEiJ_G0033399	Snupn	97	64.246	Mus_spretus
ENSCVAG00000010502	snupn	94	63.173	ENSMPUG00000017324	SNUPN	95	63.559	Mustela_putorius_furo
ENSCVAG00000010502	snupn	94	60.112	ENSMLUG00000027485	-	95	60.674	Myotis_lucifugus
ENSCVAG00000010502	snupn	94	64.045	ENSMLUG00000027517	-	95	64.607	Myotis_lucifugus
ENSCVAG00000010502	snupn	94	53.782	ENSMLUG00000000038	-	99	54.342	Myotis_lucifugus
ENSCVAG00000010502	snupn	94	63.739	ENSNGAG00000018735	Snupn	95	64.972	Nannospalax_galili
ENSCVAG00000010502	snupn	100	83.957	ENSNBRG00000017919	snupn	100	84.800	Neolamprologus_brichardi
ENSCVAG00000010502	snupn	94	45.058	ENSNLEG00000035240	-	77	71.154	Nomascus_leucogenys
ENSCVAG00000010502	snupn	94	53.521	ENSOPRG00000015889	-	95	53.521	Ochotona_princeps
ENSCVAG00000010502	snupn	88	53.474	ENSODEG00000014491	SNUPN	94	53.614	Octodon_degus
ENSCVAG00000010502	snupn	97	84.615	ENSONIG00000012855	snupn	99	85.479	Oreochromis_niloticus
ENSCVAG00000010502	snupn	94	63.662	ENSOCUG00000008801	SNUPN	95	64.225	Oryctolagus_cuniculus
ENSCVAG00000010502	snupn	100	81.818	ENSORLG00000001836	snupn	100	82.086	Oryzias_latipes
ENSCVAG00000010502	snupn	99	82.353	ENSORLG00020021175	snupn	99	82.353	Oryzias_latipes_hni
ENSCVAG00000010502	snupn	100	82.133	ENSORLG00015014444	snupn	99	82.133	Oryzias_latipes_hsok
ENSCVAG00000010502	snupn	100	82.400	ENSOMEG00000004853	snupn	100	82.400	Oryzias_melastigma
ENSCVAG00000010502	snupn	94	61.972	ENSOGAG00000004915	SNUPN	95	62.640	Otolemur_garnettii
ENSCVAG00000010502	snupn	94	63.662	ENSOARG00000001991	SNUPN	92	63.944	Ovis_aries
ENSCVAG00000010502	snupn	94	64.789	ENSPPAG00000034351	SNUPN	95	64.789	Pan_paniscus
ENSCVAG00000010502	snupn	94	64.306	ENSPPRG00000023192	SNUPN	95	64.407	Panthera_pardus
ENSCVAG00000010502	snupn	94	64.306	ENSPTIG00000003528	SNUPN	95	64.407	Panthera_tigris_altaica
ENSCVAG00000010502	snupn	94	64.789	ENSPTRG00000007302	SNUPN	95	64.789	Pan_troglodytes
ENSCVAG00000010502	snupn	94	55.932	ENSPANG00000034514	SNUPN	94	56.620	Papio_anubis
ENSCVAG00000010502	snupn	94	75.143	ENSPKIG00000012444	snupn	96	75.783	Paramormyrops_kingsleyae
ENSCVAG00000010502	snupn	94	64.246	ENSPSIG00000015229	SNUPN	95	64.246	Pelodiscus_sinensis
ENSCVAG00000010502	snupn	96	76.033	ENSPMGG00000023843	snupn	96	76.309	Periophthalmus_magnuspinnatus
ENSCVAG00000010502	snupn	94	62.147	ENSPCIG00000007854	SNUPN	95	62.147	Phascolarctos_cinereus
ENSCVAG00000010502	snupn	100	86.792	ENSPFOG00000014221	snupn	99	87.634	Poecilia_formosa
ENSCVAG00000010502	snupn	100	87.634	ENSPLAG00000002339	snupn	99	87.634	Poecilia_latipinna
ENSCVAG00000010502	snupn	100	86.792	ENSPMEG00000012436	snupn	99	87.634	Poecilia_mexicana
ENSCVAG00000010502	snupn	100	85.984	ENSPREG00000012683	snupn	99	86.828	Poecilia_reticulata
ENSCVAG00000010502	snupn	94	59.587	ENSPPYG00000006663	SNUPN	94	59.587	Pongo_abelii
ENSCVAG00000010502	snupn	94	63.277	ENSPCOG00000025482	SNUPN	95	63.559	Propithecus_coquereli
ENSCVAG00000010502	snupn	94	62.890	ENSPVAG00000010035	SNUPN	95	62.994	Pteropus_vampyrus
ENSCVAG00000010502	snupn	100	83.957	ENSPNYG00000008752	snupn	100	84.800	Pundamilia_nyererei
ENSCVAG00000010502	snupn	94	79.083	ENSPNAG00000026875	snupn	96	79.083	Pygocentrus_nattereri
ENSCVAG00000010502	snupn	94	64.689	ENSRNOG00000005426	Snupn	96	64.689	Rattus_norvegicus
ENSCVAG00000010502	snupn	94	64.124	ENSRBIG00000038665	SNUPN	95	64.789	Rhinopithecus_bieti
ENSCVAG00000010502	snupn	94	64.124	ENSRROG00000043625	SNUPN	95	64.789	Rhinopithecus_roxellana
ENSCVAG00000010502	snupn	94	65.714	ENSSBOG00000029086	-	95	66.382	Saimiri_boliviensis_boliviensis
ENSCVAG00000010502	snupn	89	80.120	ENSSFOG00015022264	snupn	66	80.120	Scleropages_formosus
ENSCVAG00000010502	snupn	99	85.791	ENSSMAG00000005485	snupn	99	85.791	Scophthalmus_maximus
ENSCVAG00000010502	snupn	100	86.898	ENSSDUG00000023461	snupn	100	86.898	Seriola_dumerili
ENSCVAG00000010502	snupn	100	87.131	ENSSLDG00000001425	snupn	100	87.131	Seriola_lalandi_dorsalis
ENSCVAG00000010502	snupn	94	52.825	ENSSARG00000005585	SNUPN	78	67.222	Sorex_araneus
ENSCVAG00000010502	snupn	94	63.866	ENSSPUG00000014331	SNUPN	95	63.866	Sphenodon_punctatus
ENSCVAG00000010502	snupn	100	86.364	ENSSPAG00000001216	snupn	100	86.364	Stegastes_partitus
ENSCVAG00000010502	snupn	94	64.225	ENSSSCG00000001877	SNUPN	95	64.225	Sus_scrofa
ENSCVAG00000010502	snupn	100	81.551	ENSTRUG00000016085	snupn	98	81.551	Takifugu_rubripes
ENSCVAG00000010502	snupn	93	68.079	ENSTNIG00000008456	snupn	100	69.492	Tetraodon_nigroviridis
ENSCVAG00000010502	snupn	94	63.662	ENSTBEG00000002434	SNUPN	95	63.662	Tupaia_belangeri
ENSCVAG00000010502	snupn	94	57.465	ENSTTRG00000011484	SNUPN	95	57.746	Tursiops_truncatus
ENSCVAG00000010502	snupn	94	63.739	ENSUAMG00000022723	SNUPN	95	63.842	Ursus_americanus
ENSCVAG00000010502	snupn	94	64.023	ENSUMAG00000003738	SNUPN	95	64.124	Ursus_maritimus
ENSCVAG00000010502	snupn	94	63.533	ENSVVUG00000019574	SNUPN	95	63.533	Vulpes_vulpes
ENSCVAG00000010502	snupn	94	64.857	ENSXETG00000015280	snupn	99	64.857	Xenopus_tropicalis
ENSCVAG00000010502	snupn	100	86.792	ENSXMAG00000006634	snupn	100	87.634	Xiphophorus_maculatus