EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010538 (Gene tree)
Gene ID: 107094995
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 23535 bases
Position: chrKL653019.1:508822-532356
Accession: 107094995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008652	Exo_endo_phos	PF03372.23	9e-21	1	1
ENSCVAP00000008664	Exo_endo_phos	PF03372.23	9.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001231	-	6003	XM_015390941	ENSCVAP00000008664	558 (aa)	XP_015246427	UPI000742BB70
ENSCVAT00000001254	-	1650	-	ENSCVAP00000008652	549 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000010538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010538	cnot6b	97	75.551	ENSCVAG00000021683	cnot6l	96	76.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010538	cnot6b	100	85.484	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSCVAG00000010538	cnot6b	100	96.601	ENSAPOG00000009994	cnot6b	100	96.601	Acanthochromis_polyacanthus
ENSCVAG00000010538	cnot6b	100	85.536	ENSAMEG00000000949	CNOT6	99	85.536	Ailuropoda_melanoleuca
ENSCVAG00000010538	cnot6b	100	93.560	ENSACIG00000016566	cnot6b	100	93.560	Amphilophus_citrinellus
ENSCVAG00000010538	cnot6b	100	96.601	ENSAOCG00000006893	cnot6b	100	96.601	Amphiprion_ocellaris
ENSCVAG00000010538	cnot6b	100	96.601	ENSAPEG00000016949	cnot6b	100	96.601	Amphiprion_percula
ENSCVAG00000010538	cnot6b	100	93.202	ENSATEG00000007862	cnot6b	100	93.202	Anabas_testudineus
ENSCVAG00000010538	cnot6b	100	86.022	ENSAPLG00000012715	CNOT6	99	86.380	Anas_platyrhynchos
ENSCVAG00000010538	cnot6b	100	86.918	ENSACAG00000016548	CNOT6	100	86.918	Anolis_carolinensis
ENSCVAG00000010538	cnot6b	100	85.663	ENSANAG00000030436	CNOT6	96	85.663	Aotus_nancymaae
ENSCVAG00000010538	cnot6b	100	94.454	ENSACLG00000008279	cnot6b	100	94.454	Astatotilapia_calliptera
ENSCVAG00000010538	cnot6b	100	87.835	ENSAMXG00000034694	cnot6b	100	87.835	Astyanax_mexicanus
ENSCVAG00000010538	cnot6b	100	89.088	ENSAMXG00000019140	cnot6a	100	89.088	Astyanax_mexicanus
ENSCVAG00000010538	cnot6b	100	85.663	ENSBTAG00000017362	CNOT6	100	85.663	Bos_taurus
ENSCVAG00000010538	cnot6b	100	85.484	ENSCJAG00000009795	CNOT6	100	85.484	Callithrix_jacchus
ENSCVAG00000010538	cnot6b	100	85.842	ENSCAFG00000000464	CNOT6	100	85.842	Canis_familiaris
ENSCVAG00000010538	cnot6b	100	85.842	ENSCAFG00020002441	CNOT6	100	85.842	Canis_lupus_dingo
ENSCVAG00000010538	cnot6b	100	85.305	ENSCHIG00000019100	CNOT6	100	85.305	Capra_hircus
ENSCVAG00000010538	cnot6b	100	85.125	ENSTSYG00000003982	CNOT6	100	85.125	Carlito_syrichta
ENSCVAG00000010538	cnot6b	100	81.183	ENSCPOG00000035657	CNOT6	100	81.183	Cavia_porcellus
ENSCVAG00000010538	cnot6b	100	81.004	ENSCCAG00000033670	CNOT6	100	81.004	Cebus_capucinus
ENSCVAG00000010538	cnot6b	100	85.484	ENSCATG00000042014	CNOT6	100	85.484	Cercocebus_atys
ENSCVAG00000010538	cnot6b	100	84.409	ENSCLAG00000010489	CNOT6	100	84.409	Chinchilla_lanigera
ENSCVAG00000010538	cnot6b	100	85.484	ENSCSAG00000008165	CNOT6	100	85.484	Chlorocebus_sabaeus
ENSCVAG00000010538	cnot6b	100	84.946	ENSCHOG00000009680	CNOT6	100	85.305	Choloepus_hoffmanni
ENSCVAG00000010538	cnot6b	100	86.380	ENSCPBG00000008908	CNOT6	100	86.738	Chrysemys_picta_bellii
ENSCVAG00000010538	cnot6b	100	85.663	ENSCANG00000026756	CNOT6	100	85.663	Colobus_angolensis_palliatus
ENSCVAG00000010538	cnot6b	100	84.050	ENSCGRG00001011452	Cnot6	100	84.050	Cricetulus_griseus_chok1gshd
ENSCVAG00000010538	cnot6b	100	82.079	ENSCGRG00000010407	Cnot6	100	82.079	Cricetulus_griseus_crigri
ENSCVAG00000010538	cnot6b	100	94.991	ENSCSEG00000010939	cnot6b	100	94.991	Cynoglossus_semilaevis
ENSCVAG00000010538	cnot6b	100	88.372	ENSDARG00000008255	cnot6a	100	88.372	Danio_rerio
ENSCVAG00000010538	cnot6b	100	87.657	ENSDARG00000101072	cnot6b	100	87.657	Danio_rerio
ENSCVAG00000010538	cnot6b	100	86.022	ENSDNOG00000041644	CNOT6	100	86.022	Dasypus_novemcinctus
ENSCVAG00000010538	cnot6b	100	76.882	ENSDORG00000001708	Cnot6	100	76.882	Dipodomys_ordii
ENSCVAG00000010538	cnot6b	100	68.571	ENSETEG00000006975	CNOT6	100	68.571	Echinops_telfairi
ENSCVAG00000010538	cnot6b	100	85.663	ENSEASG00005012794	-	100	85.663	Equus_asinus_asinus
ENSCVAG00000010538	cnot6b	90	80.639	ENSEASG00005012957	-	99	80.639	Equus_asinus_asinus
ENSCVAG00000010538	cnot6b	100	86.201	ENSECAG00000019325	CNOT6	100	86.201	Equus_caballus
ENSCVAG00000010538	cnot6b	100	80.645	ENSECAG00000012704	-	99	80.645	Equus_caballus
ENSCVAG00000010538	cnot6b	100	85.484	ENSEEUG00000015382	CNOT6	100	85.484	Erinaceus_europaeus
ENSCVAG00000010538	cnot6b	100	86.762	ENSELUG00000024580	cnot6a	100	86.762	Esox_lucius
ENSCVAG00000010538	cnot6b	100	87.478	ENSELUG00000015981	cnot6b	99	87.478	Esox_lucius
ENSCVAG00000010538	cnot6b	100	86.022	ENSFCAG00000001881	CNOT6	100	86.022	Felis_catus
ENSCVAG00000010538	cnot6b	100	86.201	ENSFALG00000007699	CNOT6	100	86.559	Ficedula_albicollis
ENSCVAG00000010538	cnot6b	100	84.050	ENSFDAG00000001999	CNOT6	100	84.050	Fukomys_damarensis
ENSCVAG00000010538	cnot6b	69	97.179	ENSFHEG00000013756	cnot6b	99	97.179	Fundulus_heteroclitus
ENSCVAG00000010538	cnot6b	95	92.628	ENSGMOG00000009767	cnot6b	99	92.628	Gadus_morhua
ENSCVAG00000010538	cnot6b	100	86.022	ENSGALG00000034316	CNOT6	100	86.380	Gallus_gallus
ENSCVAG00000010538	cnot6b	100	98.208	ENSGAFG00000008525	cnot6b	100	98.208	Gambusia_affinis
ENSCVAG00000010538	cnot6b	95	92.060	ENSGACG00000018046	cnot6b	99	92.060	Gasterosteus_aculeatus
ENSCVAG00000010538	cnot6b	100	71.326	ENSGAGG00000012176	CNOT6	100	71.685	Gopherus_agassizii
ENSCVAG00000010538	cnot6b	100	85.484	ENSGGOG00000003675	CNOT6	100	85.484	Gorilla_gorilla
ENSCVAG00000010538	cnot6b	100	94.633	ENSHBUG00000002819	cnot6b	100	94.633	Haplochromis_burtoni
ENSCVAG00000010538	cnot6b	100	84.409	ENSHGLG00000017756	CNOT6	100	84.409	Heterocephalus_glaber_female
ENSCVAG00000010538	cnot6b	100	84.409	ENSHGLG00100005747	CNOT6	100	84.409	Heterocephalus_glaber_male
ENSCVAG00000010538	cnot6b	100	93.560	ENSHCOG00000016176	cnot6b	100	93.560	Hippocampus_comes
ENSCVAG00000010538	cnot6b	100	88.909	ENSIPUG00000017482	cnot6b	100	88.909	Ictalurus_punctatus
ENSCVAG00000010538	cnot6b	100	88.551	ENSIPUG00000019831	cnot6a	100	88.551	Ictalurus_punctatus
ENSCVAG00000010538	cnot6b	100	85.484	ENSSTOG00000002803	CNOT6	100	85.484	Ictidomys_tridecemlineatus
ENSCVAG00000010538	cnot6b	100	84.946	ENSJJAG00000012296	Cnot6	100	84.946	Jaculus_jaculus
ENSCVAG00000010538	cnot6b	100	96.416	ENSKMAG00000004640	cnot6b	100	96.416	Kryptolebias_marmoratus
ENSCVAG00000010538	cnot6b	100	94.097	ENSLBEG00000027917	cnot6b	100	94.097	Labrus_bergylta
ENSCVAG00000010538	cnot6b	100	92.129	ENSLOCG00000010102	cnot6b	99	92.129	Lepisosteus_oculatus
ENSCVAG00000010538	cnot6b	100	86.380	ENSLAFG00000016742	CNOT6	100	86.380	Loxodonta_africana
ENSCVAG00000010538	cnot6b	100	85.484	ENSMFAG00000030867	CNOT6	100	85.484	Macaca_fascicularis
ENSCVAG00000010538	cnot6b	100	85.484	ENSMMUG00000018690	CNOT6	100	85.484	Macaca_mulatta
ENSCVAG00000010538	cnot6b	100	85.484	ENSMNEG00000038565	CNOT6	100	85.484	Macaca_nemestrina
ENSCVAG00000010538	cnot6b	100	85.484	ENSMLEG00000010555	CNOT6	100	85.484	Mandrillus_leucophaeus
ENSCVAG00000010538	cnot6b	100	96.422	ENSMAMG00000007515	cnot6b	100	96.422	Mastacembelus_armatus
ENSCVAG00000010538	cnot6b	100	94.454	ENSMZEG00005012899	cnot6b	100	94.454	Maylandia_zebra
ENSCVAG00000010538	cnot6b	100	84.767	ENSMAUG00000019798	Cnot6	100	84.767	Mesocricetus_auratus
ENSCVAG00000010538	cnot6b	100	83.871	ENSMICG00000013018	-	100	83.871	Microcebus_murinus
ENSCVAG00000010538	cnot6b	98	77.798	ENSMICG00000028378	-	99	77.798	Microcebus_murinus
ENSCVAG00000010538	cnot6b	100	84.767	ENSMOCG00000021662	Cnot6	100	84.767	Microtus_ochrogaster
ENSCVAG00000010538	cnot6b	100	91.771	ENSMMOG00000003227	cnot6b	100	91.771	Mola_mola
ENSCVAG00000010538	cnot6b	100	85.484	ENSMODG00000003979	CNOT6	100	85.842	Monodelphis_domestica
ENSCVAG00000010538	cnot6b	100	95.886	ENSMALG00000014251	cnot6b	100	95.886	Monopterus_albus
ENSCVAG00000010538	cnot6b	100	84.946	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.946	Mus_caroli
ENSCVAG00000010538	cnot6b	100	84.946	ENSMUSG00000020362	Cnot6	100	84.946	Mus_musculus
ENSCVAG00000010538	cnot6b	100	84.946	MGP_PahariEiJ_G0017413	Cnot6	100	84.946	Mus_pahari
ENSCVAG00000010538	cnot6b	100	84.946	MGP_SPRETEiJ_G0017122	Cnot6	100	84.946	Mus_spretus
ENSCVAG00000010538	cnot6b	100	86.201	ENSMPUG00000000587	CNOT6	96	86.201	Mustela_putorius_furo
ENSCVAG00000010538	cnot6b	100	84.369	ENSMLUG00000010257	CNOT6	100	84.369	Myotis_lucifugus
ENSCVAG00000010538	cnot6b	100	84.050	ENSNGAG00000008269	Cnot6	100	84.409	Nannospalax_galili
ENSCVAG00000010538	cnot6b	100	94.633	ENSNBRG00000010798	cnot6b	100	94.633	Neolamprologus_brichardi
ENSCVAG00000010538	cnot6b	100	84.409	ENSNLEG00000002322	CNOT6	100	84.409	Nomascus_leucogenys
ENSCVAG00000010538	cnot6b	81	80.465	ENSMEUG00000000025	CNOT6	81	81.395	Notamacropus_eugenii
ENSCVAG00000010538	cnot6b	88	86.396	ENSOPRG00000008244	-	88	86.396	Ochotona_princeps
ENSCVAG00000010538	cnot6b	100	83.513	ENSODEG00000007041	CNOT6	100	83.513	Octodon_degus
ENSCVAG00000010538	cnot6b	75	94.326	ENSONIG00000013027	cnot6b	99	94.326	Oreochromis_niloticus
ENSCVAG00000010538	cnot6b	100	86.022	ENSOANG00000010226	CNOT6	100	86.022	Ornithorhynchus_anatinus
ENSCVAG00000010538	cnot6b	100	84.464	ENSOCUG00000011083	CNOT6	100	84.464	Oryctolagus_cuniculus
ENSCVAG00000010538	cnot6b	100	95.170	ENSORLG00000005059	cnot6b	100	95.170	Oryzias_latipes
ENSCVAG00000010538	cnot6b	100	95.170	ENSORLG00020012784	cnot6b	100	95.170	Oryzias_latipes_hni
ENSCVAG00000010538	cnot6b	94	94.646	ENSORLG00015022658	cnot6b	98	94.646	Oryzias_latipes_hsok
ENSCVAG00000010538	cnot6b	100	95.707	ENSOMEG00000005295	cnot6b	100	95.707	Oryzias_melastigma
ENSCVAG00000010538	cnot6b	94	84.571	ENSOGAG00000032470	CNOT6	100	84.571	Otolemur_garnettii
ENSCVAG00000010538	cnot6b	97	84.715	ENSOARG00000001003	CNOT6	100	84.715	Ovis_aries
ENSCVAG00000010538	cnot6b	100	85.484	ENSPPAG00000032253	CNOT6	100	85.484	Pan_paniscus
ENSCVAG00000010538	cnot6b	100	85.842	ENSPPRG00000011912	CNOT6	100	85.842	Panthera_pardus
ENSCVAG00000010538	cnot6b	100	85.842	ENSPTIG00000016794	CNOT6	100	85.842	Panthera_tigris_altaica
ENSCVAG00000010538	cnot6b	100	85.484	ENSPTRG00000017636	CNOT6	100	85.484	Pan_troglodytes
ENSCVAG00000010538	cnot6b	100	85.484	ENSPANG00000016191	CNOT6	100	85.484	Papio_anubis
ENSCVAG00000010538	cnot6b	100	90.161	ENSPKIG00000021368	cnot6b	100	90.161	Paramormyrops_kingsleyae
ENSCVAG00000010538	cnot6b	98	86.055	ENSPSIG00000017307	CNOT6	100	86.422	Pelodiscus_sinensis
ENSCVAG00000010538	cnot6b	100	93.739	ENSPMGG00000011238	cnot6b	100	93.739	Periophthalmus_magnuspinnatus
ENSCVAG00000010538	cnot6b	100	83.871	ENSPEMG00000000627	Cnot6	100	84.229	Peromyscus_maniculatus_bairdii
ENSCVAG00000010538	cnot6b	100	85.663	ENSPCIG00000020319	CNOT6	99	86.022	Phascolarctos_cinereus
ENSCVAG00000010538	cnot6b	100	98.208	ENSPFOG00000006291	cnot6b	100	98.208	Poecilia_formosa
ENSCVAG00000010538	cnot6b	100	95.264	ENSPLAG00000008266	cnot6b	100	95.264	Poecilia_latipinna
ENSCVAG00000010538	cnot6b	100	98.387	ENSPMEG00000009091	cnot6b	100	98.387	Poecilia_mexicana
ENSCVAG00000010538	cnot6b	100	96.774	ENSPREG00000003713	cnot6b	100	96.774	Poecilia_reticulata
ENSCVAG00000010538	cnot6b	100	85.484	ENSPPYG00000016137	CNOT6	100	85.484	Pongo_abelii
ENSCVAG00000010538	cnot6b	72	82.772	ENSPCAG00000005599	-	71	82.772	Procavia_capensis
ENSCVAG00000010538	cnot6b	100	79.749	ENSPCOG00000017359	CNOT6	100	80.466	Propithecus_coquereli
ENSCVAG00000010538	cnot6b	100	82.437	ENSPVAG00000003069	CNOT6	100	82.437	Pteropus_vampyrus
ENSCVAG00000010538	cnot6b	100	94.275	ENSPNYG00000000321	cnot6b	100	94.275	Pundamilia_nyererei
ENSCVAG00000010538	cnot6b	100	89.088	ENSPNAG00000029586	cnot6a	100	89.088	Pygocentrus_nattereri
ENSCVAG00000010538	cnot6b	100	88.730	ENSPNAG00000028816	cnot6b	100	88.730	Pygocentrus_nattereri
ENSCVAG00000010538	cnot6b	100	84.229	ENSRNOG00000054891	Cnot6	100	84.229	Rattus_norvegicus
ENSCVAG00000010538	cnot6b	100	85.305	ENSRBIG00000004309	CNOT6	100	85.305	Rhinopithecus_bieti
ENSCVAG00000010538	cnot6b	100	85.305	ENSRROG00000035378	CNOT6	100	85.305	Rhinopithecus_roxellana
ENSCVAG00000010538	cnot6b	100	85.663	ENSSBOG00000030494	CNOT6	100	85.663	Saimiri_boliviensis_boliviensis
ENSCVAG00000010538	cnot6b	100	85.484	ENSSHAG00000017436	CNOT6	100	85.842	Sarcophilus_harrisii
ENSCVAG00000010538	cnot6b	100	91.055	ENSSFOG00015015133	CNOT6	100	91.413	Scleropages_formosus
ENSCVAG00000010538	cnot6b	100	89.624	ENSSFOG00015022383	cnot6a	96	89.624	Scleropages_formosus
ENSCVAG00000010538	cnot6b	100	94.454	ENSSMAG00000003084	cnot6b	100	94.454	Scophthalmus_maximus
ENSCVAG00000010538	cnot6b	100	96.243	ENSSDUG00000004151	cnot6b	100	96.243	Seriola_dumerili
ENSCVAG00000010538	cnot6b	100	96.064	ENSSLDG00000004448	cnot6b	100	96.064	Seriola_lalandi_dorsalis
ENSCVAG00000010538	cnot6b	64	67.598	ENSSARG00000012650	-	100	67.598	Sorex_araneus
ENSCVAG00000010538	cnot6b	100	86.559	ENSSPUG00000007893	CNOT6	100	86.918	Sphenodon_punctatus
ENSCVAG00000010538	cnot6b	100	96.780	ENSSPAG00000000149	cnot6b	100	96.780	Stegastes_partitus
ENSCVAG00000010538	cnot6b	100	85.484	ENSSSCG00000014009	CNOT6	100	85.484	Sus_scrofa
ENSCVAG00000010538	cnot6b	100	85.842	ENSTGUG00000001119	CNOT6	100	86.201	Taeniopygia_guttata
ENSCVAG00000010538	cnot6b	100	93.011	ENSTRUG00000002818	cnot6b	100	93.011	Takifugu_rubripes
ENSCVAG00000010538	cnot6b	100	93.728	ENSTNIG00000004443	cnot6b	99	93.728	Tetraodon_nigroviridis
ENSCVAG00000010538	cnot6b	78	88.281	ENSTBEG00000017094	-	88	88.281	Tupaia_belangeri
ENSCVAG00000010538	cnot6b	100	85.663	ENSTTRG00000009363	CNOT6	100	85.663	Tursiops_truncatus
ENSCVAG00000010538	cnot6b	90	74.950	ENSUAMG00000004579	CNOT6	99	74.950	Ursus_americanus
ENSCVAG00000010538	cnot6b	100	81.709	ENSUMAG00000024577	CNOT6	100	81.709	Ursus_maritimus
ENSCVAG00000010538	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSCVAG00000010538	cnot6b	100	85.842	ENSVVUG00000026940	CNOT6	100	85.842	Vulpes_vulpes
ENSCVAG00000010538	cnot6b	100	95.628	ENSXCOG00000003360	cnot6b	100	95.628	Xiphophorus_couchianus
ENSCVAG00000010538	cnot6b	100	98.387	ENSXMAG00000008730	cnot6b	100	98.387	Xiphophorus_maculatus