EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010550 (Gene tree)
Gene ID: 107087609
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 17124 bases
Position: chrKL652688.1:170224-187347
Accession: 107087609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025594	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000001238	-	3667	XM_015379278	ENSCVAP00000025594	969 (aa)	XP_015234764	UPI0007427539

Gene Model

Click here to download ENSCVAG00000010550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010550	prpf6	96	92.774	ENSG00000101161	PRPF6	100	92.349	Homo_sapiens
ENSCVAG00000010550	prpf6	100	97.420	ENSAPOG00000010395	prpf6	100	97.420	Acanthochromis_polyacanthus
ENSCVAG00000010550	prpf6	96	92.038	ENSAMEG00000001916	PRPF6	99	91.614	Ailuropoda_melanoleuca
ENSCVAG00000010550	prpf6	100	96.801	ENSACIG00000019862	prpf6	100	96.801	Amphilophus_citrinellus
ENSCVAG00000010550	prpf6	100	97.317	ENSAOCG00000012988	prpf6	100	97.317	Amphiprion_ocellaris
ENSCVAG00000010550	prpf6	96	91.290	ENSAPEG00000008301	prpf6	100	91.505	Amphiprion_percula
ENSCVAG00000010550	prpf6	100	96.698	ENSATEG00000005581	prpf6	100	96.698	Anabas_testudineus
ENSCVAG00000010550	prpf6	96	92.667	ENSACAG00000006464	PRPF6	95	92.242	Anolis_carolinensis
ENSCVAG00000010550	prpf6	96	93.640	ENSANAG00000012661	PRPF6	100	93.168	Aotus_nancymaae
ENSCVAG00000010550	prpf6	100	96.698	ENSACLG00000025875	prpf6	100	96.698	Astatotilapia_calliptera
ENSCVAG00000010550	prpf6	97	94.280	ENSAMXG00000001929	prpf6	100	92.418	Astyanax_mexicanus
ENSCVAG00000010550	prpf6	96	93.092	ENSBTAG00000011656	PRPF6	100	92.667	Bos_taurus
ENSCVAG00000010550	prpf6	96	92.986	ENSCJAG00000010616	PRPF6	100	92.561	Callithrix_jacchus
ENSCVAG00000010550	prpf6	96	93.092	ENSCAFG00000013165	PRPF6	100	92.667	Canis_familiaris
ENSCVAG00000010550	prpf6	96	93.092	ENSCAFG00020002050	PRPF6	100	92.667	Canis_lupus_dingo
ENSCVAG00000010550	prpf6	96	93.092	ENSCHIG00000018187	PRPF6	100	92.667	Capra_hircus
ENSCVAG00000010550	prpf6	96	93.199	ENSTSYG00000007814	PRPF6	100	92.774	Carlito_syrichta
ENSCVAG00000010550	prpf6	93	92.257	ENSCAPG00000015077	PRPF6	100	91.385	Cavia_aperea
ENSCVAG00000010550	prpf6	96	93.518	ENSCPOG00000007518	PRPF6	100	93.092	Cavia_porcellus
ENSCVAG00000010550	prpf6	96	89.904	ENSCCAG00000024564	PRPF6	100	89.479	Cebus_capucinus
ENSCVAG00000010550	prpf6	96	92.880	ENSCATG00000037473	PRPF6	100	92.455	Cercocebus_atys
ENSCVAG00000010550	prpf6	96	89.904	ENSCLAG00000003854	PRPF6	100	89.373	Chinchilla_lanigera
ENSCVAG00000010550	prpf6	96	88.173	ENSCSAG00000016742	PRPF6	100	87.684	Chlorocebus_sabaeus
ENSCVAG00000010550	prpf6	83	78.049	ENSCHOG00000003315	-	98	77.851	Choloepus_hoffmanni
ENSCVAG00000010550	prpf6	98	91.883	ENSCPBG00000013964	PRPF6	96	92.766	Chrysemys_picta_bellii
ENSCVAG00000010550	prpf6	96	72.410	ENSCING00000008817	-	99	71.987	Ciona_intestinalis
ENSCVAG00000010550	prpf6	96	92.667	ENSCANG00000038230	PRPF6	100	92.242	Colobus_angolensis_palliatus
ENSCVAG00000010550	prpf6	96	93.411	ENSCGRG00001022666	Prpf6	100	92.986	Cricetulus_griseus_chok1gshd
ENSCVAG00000010550	prpf6	96	91.720	ENSCSEG00000018561	prpf6	100	91.720	Cynoglossus_semilaevis
ENSCVAG00000010550	prpf6	100	92.520	ENSDARG00000091367	prpf6	100	94.280	Danio_rerio
ENSCVAG00000010550	prpf6	96	92.774	ENSDNOG00000040544	PRPF6	100	92.455	Dasypus_novemcinctus
ENSCVAG00000010550	prpf6	87	92.874	ENSDORG00000005406	Prpf6	100	92.874	Dipodomys_ordii
ENSCVAG00000010550	prpf6	96	71.598	FBgn0036828	CG6841	99	71.706	Drosophila_melanogaster
ENSCVAG00000010550	prpf6	83	92.251	ENSETEG00000004447	PRPF6	85	92.251	Echinops_telfairi
ENSCVAG00000010550	prpf6	96	86.138	ENSEBUG00000008835	prpf6	100	85.714	Eptatretus_burgeri
ENSCVAG00000010550	prpf6	99	91.125	ENSEASG00005023115	PRPF6	100	92.880	Equus_asinus_asinus
ENSCVAG00000010550	prpf6	96	89.054	ENSECAG00000013983	PRPF6	100	88.629	Equus_caballus
ENSCVAG00000010550	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSCVAG00000010550	prpf6	97	94.380	ENSELUG00000001945	prpf6	94	94.380	Esox_lucius
ENSCVAG00000010550	prpf6	96	93.092	ENSFCAG00000001183	PRPF6	100	92.667	Felis_catus
ENSCVAG00000010550	prpf6	96	86.489	ENSFALG00000006046	-	97	86.766	Ficedula_albicollis
ENSCVAG00000010550	prpf6	96	92.698	ENSFALG00000010326	-	98	92.381	Ficedula_albicollis
ENSCVAG00000010550	prpf6	96	92.030	ENSFDAG00000006451	PRPF6	100	92.744	Fukomys_damarensis
ENSCVAG00000010550	prpf6	100	97.730	ENSFHEG00000000560	prpf6	100	97.730	Fundulus_heteroclitus
ENSCVAG00000010550	prpf6	97	94.062	ENSGMOG00000015622	prpf6	99	93.531	Gadus_morhua
ENSCVAG00000010550	prpf6	96	92.774	ENSGALG00000006001	PRPF6	100	92.455	Gallus_gallus
ENSCVAG00000010550	prpf6	100	92.879	ENSGAFG00000021109	prpf6	100	92.879	Gambusia_affinis
ENSCVAG00000010550	prpf6	97	95.869	ENSGACG00000002576	prpf6	100	95.869	Gasterosteus_aculeatus
ENSCVAG00000010550	prpf6	98	91.979	ENSGAGG00000008653	PRPF6	96	92.872	Gopherus_agassizii
ENSCVAG00000010550	prpf6	96	92.774	ENSGGOG00000016876	PRPF6	100	92.349	Gorilla_gorilla
ENSCVAG00000010550	prpf6	100	96.698	ENSHBUG00000004496	prpf6	100	96.698	Haplochromis_burtoni
ENSCVAG00000010550	prpf6	96	93.305	ENSHGLG00000009222	PRPF6	100	92.880	Heterocephalus_glaber_female
ENSCVAG00000010550	prpf6	93	93.239	ENSHGLG00100016600	PRPF6	100	92.803	Heterocephalus_glaber_male
ENSCVAG00000010550	prpf6	100	95.666	ENSHCOG00000011513	prpf6	100	95.666	Hippocampus_comes
ENSCVAG00000010550	prpf6	100	92.725	ENSIPUG00000004912	prpf6	100	92.710	Ictalurus_punctatus
ENSCVAG00000010550	prpf6	96	91.083	ENSSTOG00000002922	PRPF6	100	90.234	Ictidomys_tridecemlineatus
ENSCVAG00000010550	prpf6	96	93.518	ENSJJAG00000000836	Prpf6	100	93.092	Jaculus_jaculus
ENSCVAG00000010550	prpf6	100	96.594	ENSKMAG00000017800	prpf6	100	96.594	Kryptolebias_marmoratus
ENSCVAG00000010550	prpf6	100	96.388	ENSLBEG00000012582	prpf6	100	96.388	Labrus_bergylta
ENSCVAG00000010550	prpf6	96	94.468	ENSLOCG00000004827	prpf6	96	92.660	Lepisosteus_oculatus
ENSCVAG00000010550	prpf6	96	92.880	ENSLAFG00000005272	PRPF6	100	92.455	Loxodonta_africana
ENSCVAG00000010550	prpf6	96	92.667	ENSMFAG00000037542	PRPF6	100	92.242	Macaca_fascicularis
ENSCVAG00000010550	prpf6	89	94.281	ENSMMUG00000015558	PRPF6	98	93.588	Macaca_mulatta
ENSCVAG00000010550	prpf6	96	80.403	ENSMNEG00000045555	PRPF6	100	79.979	Macaca_nemestrina
ENSCVAG00000010550	prpf6	100	96.182	ENSMAMG00000010718	prpf6	100	96.182	Mastacembelus_armatus
ENSCVAG00000010550	prpf6	90	97.257	ENSMZEG00005026539	prpf6	100	97.257	Maylandia_zebra
ENSCVAG00000010550	prpf6	97	97.228	ENSMZEG00005015261	-	100	97.228	Maylandia_zebra
ENSCVAG00000010550	prpf6	93	92.912	ENSMGAG00000006634	PRPF6	100	92.585	Meleagris_gallopavo
ENSCVAG00000010550	prpf6	96	93.518	ENSMAUG00000013969	Prpf6	100	93.092	Mesocricetus_auratus
ENSCVAG00000010550	prpf6	84	92.336	ENSMICG00000017793	PRPF6	98	92.355	Microcebus_murinus
ENSCVAG00000010550	prpf6	96	93.411	ENSMOCG00000001701	Prpf6	100	92.986	Microtus_ochrogaster
ENSCVAG00000010550	prpf6	96	97.204	ENSMMOG00000020419	prpf6	100	97.204	Mola_mola
ENSCVAG00000010550	prpf6	96	93.958	ENSMODG00000017051	PRPF6	99	93.465	Monodelphis_domestica
ENSCVAG00000010550	prpf6	95	97.174	ENSMALG00000000089	prpf6	100	97.174	Monopterus_albus
ENSCVAG00000010550	prpf6	96	87.141	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSCVAG00000010550	prpf6	96	93.518	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSCVAG00000010550	prpf6	96	93.518	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSCVAG00000010550	prpf6	96	93.518	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSCVAG00000010550	prpf6	88	93.074	ENSMPUG00000008673	PRPF6	98	93.074	Mustela_putorius_furo
ENSCVAG00000010550	prpf6	96	93.624	ENSNGAG00000003365	Prpf6	100	93.199	Nannospalax_galili
ENSCVAG00000010550	prpf6	100	96.801	ENSNBRG00000015025	prpf6	100	96.801	Neolamprologus_brichardi
ENSCVAG00000010550	prpf6	96	92.667	ENSNLEG00000010208	PRPF6	100	92.242	Nomascus_leucogenys
ENSCVAG00000010550	prpf6	96	83.735	ENSMEUG00000009824	-	90	83.992	Notamacropus_eugenii
ENSCVAG00000010550	prpf6	96	87.673	ENSODEG00000004841	PRPF6	100	87.248	Octodon_degus
ENSCVAG00000010550	prpf6	100	96.698	ENSONIG00000017406	prpf6	100	96.698	Oreochromis_niloticus
ENSCVAG00000010550	prpf6	96	93.199	ENSOANG00000004920	PRPF6	100	92.774	Ornithorhynchus_anatinus
ENSCVAG00000010550	prpf6	95	91.309	ENSOCUG00000014151	PRPF6	100	90.880	Oryctolagus_cuniculus
ENSCVAG00000010550	prpf6	100	95.872	ENSORLG00000009592	prpf6	100	95.872	Oryzias_latipes
ENSCVAG00000010550	prpf6	100	95.975	ENSORLG00020001458	prpf6	100	95.975	Oryzias_latipes_hni
ENSCVAG00000010550	prpf6	100	95.975	ENSORLG00015018762	prpf6	100	95.975	Oryzias_latipes_hsok
ENSCVAG00000010550	prpf6	100	96.698	ENSOMEG00000012174	prpf6	100	96.698	Oryzias_melastigma
ENSCVAG00000010550	prpf6	96	86.200	ENSOGAG00000007573	PRPF6	100	85.775	Otolemur_garnettii
ENSCVAG00000010550	prpf6	96	92.667	ENSOARG00000008776	PRPF6	99	92.242	Ovis_aries
ENSCVAG00000010550	prpf6	96	92.774	ENSPPAG00000008686	PRPF6	100	92.349	Pan_paniscus
ENSCVAG00000010550	prpf6	96	93.092	ENSPPRG00000008497	PRPF6	100	92.667	Panthera_pardus
ENSCVAG00000010550	prpf6	93	93.021	ENSPTIG00000011184	PRPF6	97	92.585	Panthera_tigris_altaica
ENSCVAG00000010550	prpf6	96	92.774	ENSPTRG00000013765	PRPF6	100	92.349	Pan_troglodytes
ENSCVAG00000010550	prpf6	96	92.455	ENSPANG00000024135	PRPF6	100	92.030	Papio_anubis
ENSCVAG00000010550	prpf6	100	91.046	ENSPKIG00000005627	prpf6	99	94.149	Paramormyrops_kingsleyae
ENSCVAG00000010550	prpf6	90	92.857	ENSPSIG00000007717	PRPF6	100	92.404	Pelodiscus_sinensis
ENSCVAG00000010550	prpf6	99	94.421	ENSPMGG00000008925	prpf6	99	93.698	Periophthalmus_magnuspinnatus
ENSCVAG00000010550	prpf6	96	93.518	ENSPEMG00000016036	Prpf6	100	93.092	Peromyscus_maniculatus_bairdii
ENSCVAG00000010550	prpf6	96	88.593	ENSPMAG00000006144	prpf6	99	88.593	Petromyzon_marinus
ENSCVAG00000010550	prpf6	96	93.305	ENSPCIG00000017909	PRPF6	100	92.880	Phascolarctos_cinereus
ENSCVAG00000010550	prpf6	100	96.830	ENSPFOG00000006431	prpf6	99	96.830	Poecilia_formosa
ENSCVAG00000010550	prpf6	100	97.626	ENSPLAG00000005974	prpf6	100	97.626	Poecilia_latipinna
ENSCVAG00000010550	prpf6	100	97.833	ENSPMEG00000009977	prpf6	100	97.833	Poecilia_mexicana
ENSCVAG00000010550	prpf6	100	97.730	ENSPREG00000017993	prpf6	95	97.730	Poecilia_reticulata
ENSCVAG00000010550	prpf6	96	92.242	ENSPPYG00000011256	PRPF6	100	91.817	Pongo_abelii
ENSCVAG00000010550	prpf6	93	95.098	ENSPCAG00000006536	PRPF6	88	94.444	Procavia_capensis
ENSCVAG00000010550	prpf6	96	92.774	ENSPCOG00000016881	PRPF6	100	92.349	Propithecus_coquereli
ENSCVAG00000010550	prpf6	96	87.354	ENSPVAG00000014316	PRPF6	100	86.929	Pteropus_vampyrus
ENSCVAG00000010550	prpf6	100	82.957	ENSPNYG00000001939	prpf6	100	82.957	Pundamilia_nyererei
ENSCVAG00000010550	prpf6	97	95.021	ENSPNAG00000015606	prpf6	100	93.135	Pygocentrus_nattereri
ENSCVAG00000010550	prpf6	96	93.411	ENSRNOG00000051498	Prpf6	100	92.986	Rattus_norvegicus
ENSCVAG00000010550	prpf6	96	92.667	ENSRBIG00000043613	PRPF6	100	92.242	Rhinopithecus_bieti
ENSCVAG00000010550	prpf6	96	89.630	ENSRROG00000040969	PRPF6	98	92.215	Rhinopithecus_roxellana
ENSCVAG00000010550	prpf6	87	89.735	ENSSBOG00000020632	PRPF6	93	87.543	Saimiri_boliviensis_boliviensis
ENSCVAG00000010550	prpf6	96	93.305	ENSSHAG00000016810	PRPF6	100	92.880	Sarcophilus_harrisii
ENSCVAG00000010550	prpf6	95	94.516	ENSSFOG00015020859	prpf6	100	94.086	Scleropages_formosus
ENSCVAG00000010550	prpf6	100	96.078	ENSSMAG00000008112	prpf6	100	96.078	Scophthalmus_maximus
ENSCVAG00000010550	prpf6	100	96.801	ENSSDUG00000016142	prpf6	100	96.801	Seriola_dumerili
ENSCVAG00000010550	prpf6	100	96.801	ENSSLDG00000025283	prpf6	99	96.801	Seriola_lalandi_dorsalis
ENSCVAG00000010550	prpf6	90	91.487	ENSSPUG00000018260	PRPF6	100	91.033	Sphenodon_punctatus
ENSCVAG00000010550	prpf6	100	97.214	ENSSPAG00000015850	prpf6	100	97.214	Stegastes_partitus
ENSCVAG00000010550	prpf6	97	91.623	ENSSSCG00000029119	PRPF6	98	92.494	Sus_scrofa
ENSCVAG00000010550	prpf6	96	92.797	ENSTGUG00000007221	PRPF6	100	92.479	Taeniopygia_guttata
ENSCVAG00000010550	prpf6	100	95.872	ENSTRUG00000002920	prpf6	100	95.872	Takifugu_rubripes
ENSCVAG00000010550	prpf6	96	89.798	ENSTNIG00000017873	prpf6	100	89.798	Tetraodon_nigroviridis
ENSCVAG00000010550	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSCVAG00000010550	prpf6	96	92.880	ENSTTRG00000013068	PRPF6	100	92.455	Tursiops_truncatus
ENSCVAG00000010550	prpf6	98	88.554	ENSUMAG00000021631	PRPF6	98	91.087	Ursus_maritimus
ENSCVAG00000010550	prpf6	96	93.092	ENSVVUG00000014948	PRPF6	100	92.667	Vulpes_vulpes
ENSCVAG00000010550	prpf6	96	92.872	ENSXETG00000012054	prpf6	97	92.447	Xenopus_tropicalis
ENSCVAG00000010550	prpf6	100	97.730	ENSXCOG00000008082	prpf6	100	97.730	Xiphophorus_couchianus
ENSCVAG00000010550	prpf6	100	97.833	ENSXMAG00000015581	prpf6	100	97.833	Xiphophorus_maculatus