EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010679 (Gene tree)
Gene ID: 107103658
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8485 bases
Position: chrKL654000.1:102016-110500
Accession: 107103658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008825	GN3L_Grn1	PF08701.11	9.4e-23	1	1
ENSCVAP00000008825	MMR_HSR1	PF01926.23	3.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000978	-	3493	XM_015403446	ENSCVAP00000008825	551 (aa)	XP_015258932	UPI0007427869

Gene Model

Click here to download ENSCVAG00000010679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010679	gnl3	71	44.670	ENSCVAG00000001161	gnl3l	66	45.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010679	gnl3	99	43.238	ENSG00000163938	GNL3	100	52.482	Homo_sapiens
ENSCVAG00000010679	gnl3	100	73.250	ENSAPOG00000004048	gnl3	100	73.788	Acanthochromis_polyacanthus
ENSCVAG00000010679	gnl3	99	43.509	ENSAMEG00000008456	GNL3	99	42.807	Ailuropoda_melanoleuca
ENSCVAG00000010679	gnl3	100	68.058	ENSACIG00000000545	gnl3	100	67.877	Amphilophus_citrinellus
ENSCVAG00000010679	gnl3	100	73.070	ENSAOCG00000012879	gnl3	100	73.070	Amphiprion_ocellaris
ENSCVAG00000010679	gnl3	100	73.250	ENSAPEG00000006146	gnl3	100	73.250	Amphiprion_percula
ENSCVAG00000010679	gnl3	100	70.557	ENSATEG00000024242	gnl3	100	70.736	Anabas_testudineus
ENSCVAG00000010679	gnl3	96	44.790	ENSAPLG00000005171	GNL3	99	45.956	Anas_platyrhynchos
ENSCVAG00000010679	gnl3	99	47.133	ENSACAG00000007357	GNL3	99	47.173	Anolis_carolinensis
ENSCVAG00000010679	gnl3	99	43.060	ENSANAG00000033209	GNL3	99	43.060	Aotus_nancymaae
ENSCVAG00000010679	gnl3	100	68.297	ENSACLG00000007381	gnl3	100	68.240	Astatotilapia_calliptera
ENSCVAG00000010679	gnl3	99	52.557	ENSAMXG00000020880	gnl3	99	53.263	Astyanax_mexicanus
ENSCVAG00000010679	gnl3	99	44.563	ENSBTAG00000014549	GNL3	99	45.150	Bos_taurus
ENSCVAG00000010679	gnl3	99	44.144	ENSCJAG00000006864	-	99	44.144	Callithrix_jacchus
ENSCVAG00000010679	gnl3	99	44.144	ENSCJAG00000044256	-	99	44.144	Callithrix_jacchus
ENSCVAG00000010679	gnl3	99	42.984	ENSCAFG00000009004	GNL3	99	42.806	Canis_familiaris
ENSCVAG00000010679	gnl3	90	45.382	ENSCAFG00020002613	GNL3	93	45.691	Canis_lupus_dingo
ENSCVAG00000010679	gnl3	99	44.483	ENSCHIG00000022181	GNL3	99	44.483	Capra_hircus
ENSCVAG00000010679	gnl3	99	43.262	ENSTSYG00000006851	GNL3	99	43.517	Carlito_syrichta
ENSCVAG00000010679	gnl3	87	44.491	ENSCPOG00000000282	GNL3	88	43.451	Cavia_porcellus
ENSCVAG00000010679	gnl3	99	43.784	ENSCCAG00000033281	GNL3	99	43.784	Cebus_capucinus
ENSCVAG00000010679	gnl3	99	43.238	ENSCATG00000040886	GNL3	99	43.060	Cercocebus_atys
ENSCVAG00000010679	gnl3	99	42.883	ENSCLAG00000010109	-	90	44.758	Chinchilla_lanigera
ENSCVAG00000010679	gnl3	99	43.416	ENSCSAG00000013315	GNL3	99	43.416	Chlorocebus_sabaeus
ENSCVAG00000010679	gnl3	99	41.446	ENSCHOG00000002726	GNL3	99	42.105	Choloepus_hoffmanni
ENSCVAG00000010679	gnl3	76	47.936	ENSCPBG00000018330	-	96	48.055	Chrysemys_picta_bellii
ENSCVAG00000010679	gnl3	98	42.364	ENSCANG00000039969	GNL3	99	42.364	Colobus_angolensis_palliatus
ENSCVAG00000010679	gnl3	99	43.190	ENSCGRG00001020950	Gnl3	99	42.755	Cricetulus_griseus_chok1gshd
ENSCVAG00000010679	gnl3	99	43.190	ENSCGRG00000015225	Gnl3	99	42.755	Cricetulus_griseus_crigri
ENSCVAG00000010679	gnl3	99	64.065	ENSCSEG00000005009	gnl3	100	64.065	Cynoglossus_semilaevis
ENSCVAG00000010679	gnl3	99	54.885	ENSDARG00000006219	gnl3	99	54.885	Danio_rerio
ENSCVAG00000010679	gnl3	99	43.594	ENSDNOG00000001037	GNL3	99	44.050	Dasypus_novemcinctus
ENSCVAG00000010679	gnl3	99	42.883	ENSDORG00000000674	Gnl3	99	42.134	Dipodomys_ordii
ENSCVAG00000010679	gnl3	99	39.531	ENSETEG00000016534	-	99	38.779	Echinops_telfairi
ENSCVAG00000010679	gnl3	99	44.406	ENSEASG00005014636	GNL3	99	44.366	Equus_asinus_asinus
ENSCVAG00000010679	gnl3	99	43.979	ENSECAG00000014850	GNL3	99	44.700	Equus_caballus
ENSCVAG00000010679	gnl3	99	43.214	ENSEEUG00000004427	GNL3	99	43.036	Erinaceus_europaeus
ENSCVAG00000010679	gnl3	100	63.102	ENSELUG00000008767	gnl3	100	63.102	Esox_lucius
ENSCVAG00000010679	gnl3	99	43.571	ENSFCAG00000015719	GNL3	99	43.739	Felis_catus
ENSCVAG00000010679	gnl3	99	48.128	ENSFALG00000008957	GNL3	99	47.950	Ficedula_albicollis
ENSCVAG00000010679	gnl3	99	42.370	ENSFDAG00000020679	GNL3	99	42.190	Fukomys_damarensis
ENSCVAG00000010679	gnl3	100	82.065	ENSFHEG00000020897	gnl3	100	81.884	Fundulus_heteroclitus
ENSCVAG00000010679	gnl3	99	56.392	ENSGMOG00000001745	gnl3	100	56.863	Gadus_morhua
ENSCVAG00000010679	gnl3	99	45.250	ENSGALG00000001613	GNL3	99	45.078	Gallus_gallus
ENSCVAG00000010679	gnl3	99	68.132	ENSGAFG00000007184	gnl3	99	68.132	Gambusia_affinis
ENSCVAG00000010679	gnl3	99	65.000	ENSGACG00000000309	gnl3	99	65.474	Gasterosteus_aculeatus
ENSCVAG00000010679	gnl3	79	47.894	ENSGAGG00000021579	-	99	47.894	Gopherus_agassizii
ENSCVAG00000010679	gnl3	99	43.060	ENSGGOG00000011444	GNL3	89	45.908	Gorilla_gorilla
ENSCVAG00000010679	gnl3	100	71.351	ENSHBUG00000001340	gnl3	100	72.432	Haplochromis_burtoni
ENSCVAG00000010679	gnl3	99	42.294	ENSHGLG00000018299	GNL3	99	42.199	Heterocephalus_glaber_female
ENSCVAG00000010679	gnl3	99	62.206	ENSHCOG00000009446	gnl3	99	62.298	Hippocampus_comes
ENSCVAG00000010679	gnl3	99	48.270	ENSIPUG00000023677	gnl3	99	48.820	Ictalurus_punctatus
ENSCVAG00000010679	gnl3	99	42.857	ENSSTOG00000000356	GNL3	99	42.857	Ictidomys_tridecemlineatus
ENSCVAG00000010679	gnl3	99	43.863	ENSJJAG00000021993	Gnl3	100	44.424	Jaculus_jaculus
ENSCVAG00000010679	gnl3	100	74.007	ENSKMAG00000005965	gnl3	100	74.007	Kryptolebias_marmoratus
ENSCVAG00000010679	gnl3	100	69.801	ENSLBEG00000011394	gnl3	100	68.829	Labrus_bergylta
ENSCVAG00000010679	gnl3	86	52.830	ENSLACG00000001259	GNL3	99	48.517	Latimeria_chalumnae
ENSCVAG00000010679	gnl3	99	51.767	ENSLOCG00000010542	gnl3	99	53.180	Lepisosteus_oculatus
ENSCVAG00000010679	gnl3	99	40.569	ENSLAFG00000016056	GNL3	99	40.747	Loxodonta_africana
ENSCVAG00000010679	gnl3	99	43.416	ENSMFAG00000000613	GNL3	99	43.238	Macaca_fascicularis
ENSCVAG00000010679	gnl3	98	42.182	ENSMMUG00000012511	GNL3	99	42.000	Macaca_mulatta
ENSCVAG00000010679	gnl3	98	42.364	ENSMNEG00000041979	GNL3	99	42.182	Macaca_nemestrina
ENSCVAG00000010679	gnl3	99	43.594	ENSMLEG00000027696	GNL3	99	43.416	Mandrillus_leucophaeus
ENSCVAG00000010679	gnl3	100	73.514	ENSMAMG00000008904	gnl3	100	73.514	Mastacembelus_armatus
ENSCVAG00000010679	gnl3	100	72.252	ENSMZEG00005014857	gnl3	100	72.252	Maylandia_zebra
ENSCVAG00000010679	gnl3	87	66.253	ENSMZEG00005014957	-	96	65.323	Maylandia_zebra
ENSCVAG00000010679	gnl3	85	40.042	ENSMGAG00000000848	GNL3	99	36.762	Meleagris_gallopavo
ENSCVAG00000010679	gnl3	99	42.883	ENSMAUG00000020178	Gnl3	99	42.705	Mesocricetus_auratus
ENSCVAG00000010679	gnl3	99	41.012	ENSMICG00000016373	GNL3	99	41.696	Microcebus_murinus
ENSCVAG00000010679	gnl3	99	42.058	ENSMOCG00000018437	Gnl3	99	42.058	Microtus_ochrogaster
ENSCVAG00000010679	gnl3	99	67.216	ENSMMOG00000002815	gnl3	99	67.399	Mola_mola
ENSCVAG00000010679	gnl3	88	50.207	ENSMODG00000011257	GNL3	99	47.143	Monodelphis_domestica
ENSCVAG00000010679	gnl3	96	64.662	ENSMALG00000021043	gnl3	92	72.767	Monopterus_albus
ENSCVAG00000010679	gnl3	99	42.171	MGP_CAROLIEiJ_G0019063	Gnl3	99	42.218	Mus_caroli
ENSCVAG00000010679	gnl3	99	41.459	ENSMUSG00000042354	Gnl3	100	55.195	Mus_musculus
ENSCVAG00000010679	gnl3	99	42.500	MGP_PahariEiJ_G0030080	Gnl3	99	42.500	Mus_pahari
ENSCVAG00000010679	gnl3	99	42.376	MGP_SPRETEiJ_G0019948	Gnl3	99	41.918	Mus_spretus
ENSCVAG00000010679	gnl3	99	42.451	ENSMPUG00000016777	GNL3	99	43.649	Mustela_putorius_furo
ENSCVAG00000010679	gnl3	99	44.186	ENSMLUG00000000728	GNL3	99	44.186	Myotis_lucifugus
ENSCVAG00000010679	gnl3	99	43.060	ENSNGAG00000017202	Gnl3	99	41.906	Nannospalax_galili
ENSCVAG00000010679	gnl3	87	68.191	ENSNBRG00000013161	gnl3	99	66.802	Neolamprologus_brichardi
ENSCVAG00000010679	gnl3	99	43.672	ENSNLEG00000007173	GNL3	99	43.494	Nomascus_leucogenys
ENSCVAG00000010679	gnl3	75	41.205	ENSMEUG00000011502	-	87	41.727	Notamacropus_eugenii
ENSCVAG00000010679	gnl3	77	37.907	ENSOPRG00000009356	GNL3	96	37.931	Ochotona_princeps
ENSCVAG00000010679	gnl3	99	42.068	ENSODEG00000009492	GNL3	99	41.935	Octodon_degus
ENSCVAG00000010679	gnl3	100	72.122	ENSONIG00000019335	gnl3	100	71.223	Oreochromis_niloticus
ENSCVAG00000010679	gnl3	99	47.611	ENSOANG00000013437	GNL3	99	47.865	Ornithorhynchus_anatinus
ENSCVAG00000010679	gnl3	99	42.705	ENSOCUG00000009841	GNL3	99	42.553	Oryctolagus_cuniculus
ENSCVAG00000010679	gnl3	100	66.062	ENSORLG00000016030	gnl3	100	66.184	Oryzias_latipes
ENSCVAG00000010679	gnl3	100	66.243	ENSORLG00020014358	gnl3	100	66.365	Oryzias_latipes_hni
ENSCVAG00000010679	gnl3	100	66.243	ENSORLG00015009489	gnl3	100	66.365	Oryzias_latipes_hsok
ENSCVAG00000010679	gnl3	100	67.029	ENSOMEG00000005462	gnl3	100	67.151	Oryzias_melastigma
ENSCVAG00000010679	gnl3	99	42.657	ENSOGAG00000004101	GNL3	99	42.832	Otolemur_garnettii
ENSCVAG00000010679	gnl3	99	44.640	ENSOARG00000002470	GNL3	99	44.112	Ovis_aries
ENSCVAG00000010679	gnl3	99	43.416	ENSPPAG00000019253	GNL3	99	43.416	Pan_paniscus
ENSCVAG00000010679	gnl3	99	43.011	ENSPPRG00000009550	GNL3	99	43.363	Panthera_pardus
ENSCVAG00000010679	gnl3	99	42.832	ENSPTIG00000009356	GNL3	99	43.186	Panthera_tigris_altaica
ENSCVAG00000010679	gnl3	99	43.416	ENSPTRG00000015009	GNL3	99	43.416	Pan_troglodytes
ENSCVAG00000010679	gnl3	99	42.152	ENSPANG00000016579	GNL3	99	41.975	Papio_anubis
ENSCVAG00000010679	gnl3	100	56.351	ENSPKIG00000024295	gnl3	100	56.887	Paramormyrops_kingsleyae
ENSCVAG00000010679	gnl3	98	48.319	ENSPSIG00000011486	GNL3	99	48.161	Pelodiscus_sinensis
ENSCVAG00000010679	gnl3	99	60.766	ENSPMGG00000008210	gnl3	99	60.766	Periophthalmus_magnuspinnatus
ENSCVAG00000010679	gnl3	99	42.226	ENSPEMG00000017577	Gnl3	99	42.478	Peromyscus_maniculatus_bairdii
ENSCVAG00000010679	gnl3	87	49.064	ENSPCIG00000018642	GNL3	98	45.276	Phascolarctos_cinereus
ENSCVAG00000010679	gnl3	100	79.204	ENSPFOG00000017601	gnl3	97	82.625	Poecilia_formosa
ENSCVAG00000010679	gnl3	100	83.303	ENSPLAG00000016968	gnl3	100	83.303	Poecilia_latipinna
ENSCVAG00000010679	gnl3	99	76.374	ENSPMEG00000018775	gnl3	99	76.374	Poecilia_mexicana
ENSCVAG00000010679	gnl3	99	76.007	ENSPREG00000002909	gnl3	99	76.007	Poecilia_reticulata
ENSCVAG00000010679	gnl3	99	42.781	ENSPPYG00000013800	GNL3	88	45.582	Pongo_abelii
ENSCVAG00000010679	gnl3	81	45.898	ENSPCAG00000002006	GNL3	81	45.898	Procavia_capensis
ENSCVAG00000010679	gnl3	99	43.828	ENSPCOG00000026637	GNL3	99	43.717	Propithecus_coquereli
ENSCVAG00000010679	gnl3	99	43.617	ENSPVAG00000012586	GNL3	99	43.972	Pteropus_vampyrus
ENSCVAG00000010679	gnl3	93	62.095	ENSPNYG00000005130	gnl3	98	62.818	Pundamilia_nyererei
ENSCVAG00000010679	gnl3	99	52.548	ENSPNAG00000013096	gnl3	99	51.845	Pygocentrus_nattereri
ENSCVAG00000010679	gnl3	99	42.190	ENSRNOG00000028461	Gnl3	99	42.576	Rattus_norvegicus
ENSCVAG00000010679	gnl3	99	43.210	ENSRBIG00000031778	GNL3	99	43.060	Rhinopithecus_bieti
ENSCVAG00000010679	gnl3	99	43.210	ENSRROG00000030086	GNL3	99	43.060	Rhinopithecus_roxellana
ENSCVAG00000010679	gnl3	99	43.286	ENSSBOG00000019990	GNL3	99	43.386	Saimiri_boliviensis_boliviensis
ENSCVAG00000010679	gnl3	86	48.847	ENSSHAG00000006141	GNL3	99	45.144	Sarcophilus_harrisii
ENSCVAG00000010679	gnl3	100	57.168	ENSSFOG00015021228	gnl3	100	57.451	Scleropages_formosus
ENSCVAG00000010679	gnl3	100	69.259	ENSSMAG00000006662	gnl3	100	68.897	Scophthalmus_maximus
ENSCVAG00000010679	gnl3	100	73.960	ENSSDUG00000000972	gnl3	100	73.779	Seriola_dumerili
ENSCVAG00000010679	gnl3	100	74.141	ENSSLDG00000008692	gnl3	92	73.960	Seriola_lalandi_dorsalis
ENSCVAG00000010679	gnl3	89	43.600	ENSSARG00000002226	GNL3	90	44.000	Sorex_araneus
ENSCVAG00000010679	gnl3	99	47.405	ENSSPUG00000003582	GNL3	99	48.077	Sphenodon_punctatus
ENSCVAG00000010679	gnl3	100	72.842	ENSSPAG00000020180	gnl3	100	72.662	Stegastes_partitus
ENSCVAG00000010679	gnl3	99	43.137	ENSSSCG00000011449	GNL3	99	43.292	Sus_scrofa
ENSCVAG00000010679	gnl3	85	51.168	ENSTGUG00000005774	GNL3	99	48.214	Taeniopygia_guttata
ENSCVAG00000010679	gnl3	100	63.538	ENSTRUG00000005552	gnl3	100	63.899	Takifugu_rubripes
ENSCVAG00000010679	gnl3	100	63.225	ENSTNIG00000007263	gnl3	100	64.130	Tetraodon_nigroviridis
ENSCVAG00000010679	gnl3	97	38.628	ENSTBEG00000017518	GNL3	99	39.154	Tupaia_belangeri
ENSCVAG00000010679	gnl3	99	44.505	ENSUAMG00000012347	GNL3	99	43.423	Ursus_americanus
ENSCVAG00000010679	gnl3	99	43.684	ENSUMAG00000021001	GNL3	99	43.158	Ursus_maritimus
ENSCVAG00000010679	gnl3	99	42.077	ENSVVUG00000024536	-	100	49.296	Vulpes_vulpes
ENSCVAG00000010679	gnl3	81	82.405	ENSXCOG00000018425	gnl3	95	82.405	Xiphophorus_couchianus
ENSCVAG00000010679	gnl3	100	82.033	ENSXMAG00000022565	gnl3	100	82.033	Xiphophorus_maculatus