EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010727 (Gene tree)
Gene ID: 107092137
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4754 bases
Position: chrKL652869.1:277860-282613
Accession: 107092137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025724	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000942	-	992	-	ENSCVAP00000008849	238 (aa)	-	-
ENSCVAT00000000934	-	2077	XM_015386451	ENSCVAP00000025724	213 (aa)	XP_015241937	UPI00074276FB

Gene Model

Click here to download ENSCVAG00000010727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010727	rab4a	79	44.118	ENSCVAG00000014416	-	80	44.118
ENSCVAG00000010727	rab4a	100	42.254	ENSCVAG00000022799	-	99	42.254
ENSCVAG00000010727	rab4a	97	32.227	ENSCVAG00000019227	zgc:101559	85	32.227
ENSCVAG00000010727	rab4a	91	31.088	ENSCVAG00000020501	rab23	98	30.986
ENSCVAG00000010727	rab4a	96	36.098	ENSCVAG00000012889	rab6ba	93	36.098
ENSCVAG00000010727	rab4a	84	37.705	ENSCVAG00000000281	RAB7A	88	37.705
ENSCVAG00000010727	rab4a	76	40.994	ENSCVAG00000018433	rab22a	83	40.994
ENSCVAG00000010727	rab4a	75	37.195	ENSCVAG00000011665	rab33a	60	37.195
ENSCVAG00000010727	rab4a	80	46.784	ENSCVAG00000022585	-	83	46.784
ENSCVAG00000010727	rab4a	76	43.478	ENSCVAG00000008239	rab5aa	75	43.478
ENSCVAG00000010727	rab4a	76	33.333	ENSCVAG00000008670	hrasb	85	33.333
ENSCVAG00000010727	rab4a	96	36.098	ENSCVAG00000004751	rab6bb	94	36.098
ENSCVAG00000010727	rab4a	89	42.188	ENSCVAG00000015862	-	90	42.188
ENSCVAG00000010727	rab4a	80	52.632	ENSCVAG00000020016	rab11al	79	52.632
ENSCVAG00000010727	rab4a	75	34.545	ENSCVAG00000006083	si:cabz01085950.1	81	34.545
ENSCVAG00000010727	rab4a	77	37.500	ENSCVAG00000002953	RAB9A	84	37.500
ENSCVAG00000010727	rab4a	83	45.763	ENSCVAG00000018085	rab30	87	45.763
ENSCVAG00000010727	rab4a	82	34.807	ENSCVAG00000014038	RAB29	86	34.807
ENSCVAG00000010727	rab4a	82	46.286	ENSCVAG00000009222	zgc:171927	82	46.286
ENSCVAG00000010727	rab4a	68	40.000	ENSCVAG00000000862	-	71	39.181
ENSCVAG00000010727	rab4a	80	53.801	ENSCVAG00000019751	-	77	53.801
ENSCVAG00000010727	rab4a	83	47.727	ENSCVAG00000020003	rab25b	85	47.727
ENSCVAG00000010727	rab4a	80	54.386	ENSCVAG00000017021	-	77	54.386
ENSCVAG00000010727	rab4a	80	34.857	ENSCVAG00000001150	si:dkey-13a21.4	85	34.857
ENSCVAG00000010727	rab4a	81	45.930	ENSCVAG00000022649	-	86	45.930
ENSCVAG00000010727	rab4a	54	31.092	ENSCVAG00000006913	arl8	63	31.092
ENSCVAG00000010727	rab4a	78	40.936	ENSCVAG00000022249	rab6a	82	40.936
ENSCVAG00000010727	rab4a	77	36.905	ENSCVAG00000021826	rab9b	83	36.905
ENSCVAG00000010727	rab4a	80	54.386	ENSCVAG00000019718	-	77	54.386
ENSCVAG00000010727	rab4a	100	37.383	ENSCVAG00000008276	RAB15	100	37.383
ENSCVAG00000010727	rab4a	76	43.210	ENSCVAG00000012806	rab35b	80	43.210
ENSCVAG00000010727	rab4a	86	42.935	ENSCVAG00000015451	rab18a	89	42.935
ENSCVAG00000010727	rab4a	81	34.270	ENSCVAG00000006062	KRAS	93	34.270
ENSCVAG00000010727	rab4a	98	53.991	ENSCVAG00000017623	rab2a	98	53.991
ENSCVAG00000010727	rab4a	84	37.705	ENSCVAG00000005429	-	88	37.705
ENSCVAG00000010727	rab4a	76	43.478	ENSCVAG00000009550	rab5c	78	41.860
ENSCVAG00000010727	rab4a	76	33.951	ENSCVAG00000011432	rabl2	72	33.951
ENSCVAG00000010727	rab4a	82	37.931	ENSCVAG00000001618	rab41	81	37.931
ENSCVAG00000010727	rab4a	86	39.362	ENSCVAG00000017064	si:dkey-34d22.5	85	39.362
ENSCVAG00000010727	rab4a	72	30.519	ENSCVAG00000004027	rheb	84	30.519
ENSCVAG00000010727	rab4a	54	31.933	ENSCVAG00000012706	arl5c	63	31.933
ENSCVAG00000010727	rab4a	79	40.828	ENSCVAG00000003539	rab12	69	40.828
ENSCVAG00000010727	rab4a	79	41.071	ENSCVAG00000003537	si:dkey-16l2.16	86	39.444
ENSCVAG00000010727	rab4a	81	32.386	ENSCVAG00000001281	rhebl1	92	32.386
ENSCVAG00000010727	rab4a	99	59.048	ENSCVAG00000022353	rab14	97	59.048
ENSCVAG00000010727	rab4a	83	48.864	ENSCVAG00000008126	-	83	48.864
ENSCVAG00000010727	rab4a	74	35.000	ENSCVAG00000018191	rab34a	60	35.000
ENSCVAG00000010727	rab4a	89	41.667	ENSCVAG00000014915	RAB39B	90	41.667
ENSCVAG00000010727	rab4a	96	47.059	ENSCVAG00000013878	rab11a	94	47.059
ENSCVAG00000010727	rab4a	77	36.905	ENSCVAG00000016312	rab9a	78	36.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010727	rab4a	100	94.366	ENSELUG00000014785	rab4a	100	94.366	Esox_lucius
ENSCVAG00000010727	rab4a	100	99.061	ENSFHEG00000010509	rab4a	100	99.061	Fundulus_heteroclitus
ENSCVAG00000010727	rab4a	100	98.592	ENSGAFG00000005477	rab4a	100	98.592	Gambusia_affinis
ENSCVAG00000010727	rab4a	100	97.664	ENSGACG00000016164	rab4a	98	97.664	Gasterosteus_aculeatus
ENSCVAG00000010727	rab4a	100	99.061	ENSKMAG00000020250	rab4a	100	99.061	Kryptolebias_marmoratus
ENSCVAG00000010727	rab4a	100	98.592	ENSLBEG00000003101	rab4a	100	98.592	Labrus_bergylta
ENSCVAG00000010727	rab4a	100	96.714	ENSMMOG00000015287	rab4a	100	96.714	Mola_mola
ENSCVAG00000010727	rab4a	100	98.592	ENSPFOG00000014630	rab4a	100	98.592	Poecilia_formosa
ENSCVAG00000010727	rab4a	100	98.592	ENSPLAG00000014563	rab4a	100	98.592	Poecilia_latipinna
ENSCVAG00000010727	rab4a	100	98.592	ENSPMEG00000012205	rab4a	100	98.592	Poecilia_mexicana
ENSCVAG00000010727	rab4a	100	98.592	ENSPREG00000010154	rab4a	100	98.592	Poecilia_reticulata
ENSCVAG00000010727	rab4a	100	94.366	ENSSFOG00015015336	rab4a	100	94.366	Scleropages_formosus
ENSCVAG00000010727	rab4a	100	98.592	ENSXMAG00000026193	rab4a	100	98.592	Xiphophorus_maculatus