EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010815 (Gene tree)
Gene ID: 107083723
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5279 bases
Position: chrKL652581.1:1330219-1335497
Accession: 107083723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	1	6
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	2	6
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	3	6
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	4	6
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	5	6
ENSCVAP00000008890	zf-C2H2	PF00096.26	1e-32	6	6
ENSCVAP00000008890	zf-met	PF12874.7	6.5e-15	1	3
ENSCVAP00000008890	zf-met	PF12874.7	6.5e-15	2	3
ENSCVAP00000008890	zf-met	PF12874.7	6.5e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000846	-	3243	XM_015373151	ENSCVAP00000008890	1080 (aa)	XP_015228637	-

Gene Model

Click here to download ENSCVAG00000010815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010815	sall4	59	57.143	ENSCVAG00000010442	-	98	57.143
ENSCVAG00000010815	sall4	58	52.000	ENSCVAG00000014269	-	61	52.000
ENSCVAG00000010815	sall4	58	48.980	ENSCVAG00000002242	-	99	57.143
ENSCVAG00000010815	sall4	85	77.273	ENSCVAG00000020513	sall1a	76	77.273
ENSCVAG00000010815	sall4	57	55.556	ENSCVAG00000002506	-	95	55.556
ENSCVAG00000010815	sall4	58	53.061	ENSCVAG00000012543	-	87	53.061
ENSCVAG00000010815	sall4	58	55.102	ENSCVAG00000021107	-	93	55.102
ENSCVAG00000010815	sall4	57	50.000	ENSCVAG00000005112	-	74	50.000
ENSCVAG00000010815	sall4	57	49.057	ENSCVAG00000003514	-	75	49.057
ENSCVAG00000010815	sall4	74	56.716	ENSCVAG00000009684	sall3a	86	56.716
ENSCVAG00000010815	sall4	57	57.895	ENSCVAG00000002500	-	86	57.895
ENSCVAG00000010815	sall4	59	44.000	ENSCVAG00000003250	-	96	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010815	sall4	100	44.454	ENSG00000101115	SALL4	100	49.383	Homo_sapiens
ENSCVAG00000010815	sall4	100	78.197	ENSAPOG00000002465	sall4	100	78.197	Acanthochromis_polyacanthus
ENSCVAG00000010815	sall4	100	44.649	ENSAMEG00000013250	-	99	46.267	Ailuropoda_melanoleuca
ENSCVAG00000010815	sall4	100	76.888	ENSACIG00000017298	sall4	100	76.888	Amphilophus_citrinellus
ENSCVAG00000010815	sall4	100	79.117	ENSAOCG00000023678	sall4	100	79.117	Amphiprion_ocellaris
ENSCVAG00000010815	sall4	100	79.485	ENSAPEG00000000751	sall4	100	79.485	Amphiprion_percula
ENSCVAG00000010815	sall4	100	80.257	ENSATEG00000024480	sall4	100	79.890	Anabas_testudineus
ENSCVAG00000010815	sall4	100	50.948	ENSAPLG00000006498	SALL4	100	50.779	Anas_platyrhynchos
ENSCVAG00000010815	sall4	100	50.564	ENSACAG00000012748	SALL4	100	50.737	Anolis_carolinensis
ENSCVAG00000010815	sall4	100	44.415	ENSANAG00000023352	SALL4	100	44.415	Aotus_nancymaae
ENSCVAG00000010815	sall4	100	77.185	ENSACLG00000017851	sall4	100	77.185	Astatotilapia_calliptera
ENSCVAG00000010815	sall4	99	64.574	ENSAMXG00000001254	sall4	99	65.549	Astyanax_mexicanus
ENSCVAG00000010815	sall4	100	42.671	ENSBTAG00000003101	SALL4	100	42.820	Bos_taurus
ENSCVAG00000010815	sall4	81	45.616	ENSCJAG00000000591	SALL4	97	45.485	Callithrix_jacchus
ENSCVAG00000010815	sall4	100	44.987	ENSCAFG00000011738	-	100	44.978	Canis_familiaris
ENSCVAG00000010815	sall4	100	45.074	ENSCAFG00020021870	SALL4	100	45.066	Canis_lupus_dingo
ENSCVAG00000010815	sall4	100	42.807	ENSCHIG00000026270	SALL4	100	42.957	Capra_hircus
ENSCVAG00000010815	sall4	100	43.284	ENSTSYG00000007359	SALL4	92	67.308	Carlito_syrichta
ENSCVAG00000010815	sall4	97	44.424	ENSCAPG00000012135	SALL4	95	44.879	Cavia_aperea
ENSCVAG00000010815	sall4	100	40.493	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSCVAG00000010815	sall4	100	44.386	ENSCATG00000030757	SALL4	100	44.123	Cercocebus_atys
ENSCVAG00000010815	sall4	100	43.821	ENSCLAG00000010479	SALL4	92	65.385	Chinchilla_lanigera
ENSCVAG00000010815	sall4	100	44.211	ENSCSAG00000015269	SALL4	100	43.947	Chlorocebus_sabaeus
ENSCVAG00000010815	sall4	99	50.789	ENSCPBG00000014995	SALL4	99	50.226	Chrysemys_picta_bellii
ENSCVAG00000010815	sall4	100	44.298	ENSCANG00000036463	SALL4	100	44.035	Colobus_angolensis_palliatus
ENSCVAG00000010815	sall4	62	54.680	ENSCGRG00001019569	Sall4	100	52.018	Cricetulus_griseus_chok1gshd
ENSCVAG00000010815	sall4	82	63.462	ENSCGRG00000000462	Sall4	100	76.543	Cricetulus_griseus_crigri
ENSCVAG00000010815	sall4	100	75.938	ENSCSEG00000014604	sall4	100	75.846	Cynoglossus_semilaevis
ENSCVAG00000010815	sall4	99	64.098	ENSDARG00000044485	sall4	99	63.949	Danio_rerio
ENSCVAG00000010815	sall4	100	44.870	ENSDNOG00000040633	SALL4	100	44.755	Dasypus_novemcinctus
ENSCVAG00000010815	sall4	100	42.133	ENSDORG00000012841	Sall4	100	74.359	Dipodomys_ordii
ENSCVAG00000010815	sall4	74	65.385	ENSETEG00000012475	-	63	65.385	Echinops_telfairi
ENSCVAG00000010815	sall4	100	45.170	ENSECAG00000018533	SALL4	100	44.978	Equus_caballus
ENSCVAG00000010815	sall4	100	43.794	ENSEEUG00000003649	SALL4	99	42.544	Erinaceus_europaeus
ENSCVAG00000010815	sall4	100	65.190	ENSELUG00000005696	sall4	100	65.190	Esox_lucius
ENSCVAG00000010815	sall4	100	45.004	ENSFCAG00000002822	SALL4	100	44.813	Felis_catus
ENSCVAG00000010815	sall4	100	49.956	ENSFALG00000013149	SALL4	100	50.438	Ficedula_albicollis
ENSCVAG00000010815	sall4	100	43.257	ENSFDAG00000017812	SALL4	92	58.128	Fukomys_damarensis
ENSCVAG00000010815	sall4	100	85.517	ENSFHEG00000014187	sall4	100	85.517	Fundulus_heteroclitus
ENSCVAG00000010815	sall4	100	69.126	ENSGMOG00000003822	sall4	100	69.330	Gadus_morhua
ENSCVAG00000010815	sall4	100	51.476	ENSGALG00000041365	SALL4	100	51.510	Gallus_gallus
ENSCVAG00000010815	sall4	100	86.334	ENSGAFG00000019925	sall4	100	86.150	Gambusia_affinis
ENSCVAG00000010815	sall4	100	73.084	ENSGACG00000011124	sall4	100	72.901	Gasterosteus_aculeatus
ENSCVAG00000010815	sall4	99	51.049	ENSGAGG00000002297	SALL4	100	50.787	Gopherus_agassizii
ENSCVAG00000010815	sall4	100	44.231	ENSGGOG00000001832	SALL4	100	44.123	Gorilla_gorilla
ENSCVAG00000010815	sall4	100	77.277	ENSHBUG00000007327	sall4	100	77.277	Haplochromis_burtoni
ENSCVAG00000010815	sall4	98	43.384	ENSHGLG00000009043	SALL4	97	43.141	Heterocephalus_glaber_female
ENSCVAG00000010815	sall4	98	43.384	ENSHGLG00100002722	SALL4	97	43.141	Heterocephalus_glaber_male
ENSCVAG00000010815	sall4	100	74.335	ENSHCOG00000008519	sall4	100	74.152	Hippocampus_comes
ENSCVAG00000010815	sall4	99	64.882	ENSIPUG00000019170	sall4	99	65.336	Ictalurus_punctatus
ENSCVAG00000010815	sall4	63	54.146	ENSSTOG00000025002	SALL4	100	81.690	Ictidomys_tridecemlineatus
ENSCVAG00000010815	sall4	100	44.154	ENSJJAG00000020688	Sall4	99	83.099	Jaculus_jaculus
ENSCVAG00000010815	sall4	100	82.810	ENSKMAG00000002501	sall4	100	82.532	Kryptolebias_marmoratus
ENSCVAG00000010815	sall4	100	76.077	ENSLBEG00000019951	sall4	100	75.894	Labrus_bergylta
ENSCVAG00000010815	sall4	96	47.383	ENSLACG00000013898	SALL4	99	57.068	Latimeria_chalumnae
ENSCVAG00000010815	sall4	100	62.072	ENSLOCG00000002427	sall4	100	61.982	Lepisosteus_oculatus
ENSCVAG00000010815	sall4	100	45.486	ENSLAFG00000004309	SALL4	100	45.246	Loxodonta_africana
ENSCVAG00000010815	sall4	100	44.298	ENSMFAG00000027169	SALL4	100	43.947	Macaca_fascicularis
ENSCVAG00000010815	sall4	93	44.791	ENSMMUG00000003870	SALL4	100	55.172	Macaca_mulatta
ENSCVAG00000010815	sall4	93	44.791	ENSMNEG00000035995	SALL4	99	44.499	Macaca_nemestrina
ENSCVAG00000010815	sall4	100	44.386	ENSMLEG00000030467	SALL4	100	44.123	Mandrillus_leucophaeus
ENSCVAG00000010815	sall4	100	78.474	ENSMAMG00000005223	sall4	100	78.474	Mastacembelus_armatus
ENSCVAG00000010815	sall4	100	77.093	ENSMZEG00005023418	sall4	100	77.093	Maylandia_zebra
ENSCVAG00000010815	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSCVAG00000010815	sall4	100	42.474	ENSMAUG00000015814	Sall4	100	73.494	Mesocricetus_auratus
ENSCVAG00000010815	sall4	100	44.668	ENSMICG00000000027	SALL4	100	44.912	Microcebus_murinus
ENSCVAG00000010815	sall4	100	43.576	ENSMOCG00000018245	Sall4	100	80.822	Microtus_ochrogaster
ENSCVAG00000010815	sall4	100	79.155	ENSMMOG00000014929	sall4	100	78.880	Mola_mola
ENSCVAG00000010815	sall4	99	47.940	ENSMODG00000016387	SALL4	97	47.811	Monodelphis_domestica
ENSCVAG00000010815	sall4	100	79.614	ENSMALG00000018709	sall4	100	80.153	Monopterus_albus
ENSCVAG00000010815	sall4	100	41.767	MGP_CAROLIEiJ_G0024723	Sall4	100	83.333	Mus_caroli
ENSCVAG00000010815	sall4	100	42.351	ENSMUSG00000027547	Sall4	100	83.333	Mus_musculus
ENSCVAG00000010815	sall4	100	41.191	MGP_PahariEiJ_G0026164	Sall4	100	83.333	Mus_pahari
ENSCVAG00000010815	sall4	100	42.264	MGP_SPRETEiJ_G0025643	Sall4	100	83.333	Mus_spretus
ENSCVAG00000010815	sall4	100	44.541	ENSMPUG00000017543	SALL4	96	44.785	Mustela_putorius_furo
ENSCVAG00000010815	sall4	100	40.661	ENSMLUG00000008405	-	100	40.625	Myotis_lucifugus
ENSCVAG00000010815	sall4	99	34.461	ENSMLUG00000028073	-	99	34.201	Myotis_lucifugus
ENSCVAG00000010815	sall4	97	44.240	ENSMLUG00000007060	-	98	44.126	Myotis_lucifugus
ENSCVAG00000010815	sall4	100	43.168	ENSNGAG00000017833	Sall4	100	42.435	Nannospalax_galili
ENSCVAG00000010815	sall4	100	76.427	ENSNBRG00000001829	sall4	100	76.888	Neolamprologus_brichardi
ENSCVAG00000010815	sall4	100	43.969	ENSNLEG00000007013	SALL4	100	43.860	Nomascus_leucogenys
ENSCVAG00000010815	sall4	84	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSCVAG00000010815	sall4	100	44.115	ENSOPRG00000011640	SALL4	100	44.007	Ochotona_princeps
ENSCVAG00000010815	sall4	100	78.105	ENSONIG00000016557	sall4	100	78.105	Oreochromis_niloticus
ENSCVAG00000010815	sall4	100	51.084	ENSOANG00000008667	SALL4	97	51.943	Ornithorhynchus_anatinus
ENSCVAG00000010815	sall4	97	45.336	ENSOCUG00000011797	SALL4	98	45.421	Oryctolagus_cuniculus
ENSCVAG00000010815	sall4	100	77.079	ENSORLG00000016130	sall4	100	77.079	Oryzias_latipes
ENSCVAG00000010815	sall4	100	76.987	ENSORLG00020007339	sall4	100	76.987	Oryzias_latipes_hni
ENSCVAG00000010815	sall4	100	77.172	ENSORLG00015002265	sall4	100	77.172	Oryzias_latipes_hsok
ENSCVAG00000010815	sall4	100	77.932	ENSOMEG00000017344	sall4	100	77.932	Oryzias_melastigma
ENSCVAG00000010815	sall4	97	46.260	ENSOGAG00000013799	SALL4	99	46.168	Otolemur_garnettii
ENSCVAG00000010815	sall4	100	44.231	ENSPPAG00000038064	SALL4	100	44.123	Pan_paniscus
ENSCVAG00000010815	sall4	100	45.130	ENSPPRG00000008677	SALL4	100	44.957	Panthera_pardus
ENSCVAG00000010815	sall4	100	44.318	ENSPTRG00000013631	SALL4	100	44.211	Pan_troglodytes
ENSCVAG00000010815	sall4	93	44.791	ENSPANG00000021792	SALL4	99	44.499	Papio_anubis
ENSCVAG00000010815	sall4	100	61.580	ENSPKIG00000007074	sall4	100	61.399	Paramormyrops_kingsleyae
ENSCVAG00000010815	sall4	99	51.134	ENSPSIG00000009066	SALL4	100	50.917	Pelodiscus_sinensis
ENSCVAG00000010815	sall4	100	67.279	ENSPMGG00000022551	sall4	100	67.251	Periophthalmus_magnuspinnatus
ENSCVAG00000010815	sall4	100	42.646	ENSPEMG00000022706	Sall4	100	83.333	Peromyscus_maniculatus_bairdii
ENSCVAG00000010815	sall4	99	48.336	ENSPCIG00000022838	SALL4	97	48.556	Phascolarctos_cinereus
ENSCVAG00000010815	sall4	100	86.519	ENSPFOG00000001442	sall4	100	86.150	Poecilia_formosa
ENSCVAG00000010815	sall4	100	86.611	ENSPLAG00000008760	sall4	100	86.242	Poecilia_latipinna
ENSCVAG00000010815	sall4	100	86.519	ENSPMEG00000008497	sall4	100	86.334	Poecilia_mexicana
ENSCVAG00000010815	sall4	100	85.965	ENSPREG00000021140	sall4	100	85.780	Poecilia_reticulata
ENSCVAG00000010815	sall4	100	44.105	ENSPPYG00000011138	SALL4	100	43.996	Pongo_abelii
ENSCVAG00000010815	sall4	100	42.507	ENSPCAG00000004726	SALL4	99	42.544	Procavia_capensis
ENSCVAG00000010815	sall4	100	44.522	ENSPCOG00000016321	SALL4	93	58.128	Propithecus_coquereli
ENSCVAG00000010815	sall4	94	43.296	ENSPVAG00000002075	SALL4	94	43.551	Pteropus_vampyrus
ENSCVAG00000010815	sall4	100	77.164	ENSPNYG00000021738	sall4	100	77.164	Pundamilia_nyererei
ENSCVAG00000010815	sall4	99	66.576	ENSPNAG00000020929	sall4	99	66.667	Pygocentrus_nattereri
ENSCVAG00000010815	sall4	100	43.053	ENSRNOG00000050035	Sall4	100	43.310	Rattus_norvegicus
ENSCVAG00000010815	sall4	100	44.298	ENSRBIG00000039876	SALL4	100	44.035	Rhinopithecus_bieti
ENSCVAG00000010815	sall4	100	44.474	ENSRROG00000036585	SALL4	100	44.123	Rhinopithecus_roxellana
ENSCVAG00000010815	sall4	100	44.785	ENSSBOG00000030011	SALL4	91	56.931	Saimiri_boliviensis_boliviensis
ENSCVAG00000010815	sall4	95	62.437	ENSSHAG00000018013	SALL4	90	62.121	Sarcophilus_harrisii
ENSCVAG00000010815	sall4	100	61.456	ENSSFOG00015021075	sall4	100	62.206	Scleropages_formosus
ENSCVAG00000010815	sall4	100	78.571	ENSSMAG00000019218	sall4	99	78.480	Scophthalmus_maximus
ENSCVAG00000010815	sall4	100	80.935	ENSSDUG00000004657	sall4	100	80.660	Seriola_dumerili
ENSCVAG00000010815	sall4	100	79.835	ENSSLDG00000004973	sall4	100	80.385	Seriola_lalandi_dorsalis
ENSCVAG00000010815	sall4	100	79.853	ENSSPAG00000001978	sall4	100	79.945	Stegastes_partitus
ENSCVAG00000010815	sall4	100	43.864	ENSSSCG00000007479	SALL4	100	43.755	Sus_scrofa
ENSCVAG00000010815	sall4	100	75.710	ENSTRUG00000007410	sall4	100	75.344	Takifugu_rubripes
ENSCVAG00000010815	sall4	100	73.646	ENSTNIG00000012460	sall4	100	73.438	Tetraodon_nigroviridis
ENSCVAG00000010815	sall4	98	42.582	ENSTTRG00000007753	SALL4	69	43.852	Tursiops_truncatus
ENSCVAG00000010815	sall4	100	44.737	ENSUAMG00000010113	SALL4	100	44.815	Ursus_americanus
ENSCVAG00000010815	sall4	97	44.904	ENSUMAG00000024274	SALL4	98	44.720	Ursus_maritimus
ENSCVAG00000010815	sall4	100	48.668	ENSXETG00000012326	sall4	100	48.802	Xenopus_tropicalis
ENSCVAG00000010815	sall4	100	77.613	ENSXCOG00000015467	sall4	100	77.428	Xiphophorus_couchianus
ENSCVAG00000010815	sall4	100	78.538	ENSXMAG00000012692	sall4	100	78.353	Xiphophorus_maculatus