EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010848 (Gene tree)
Gene ID: 107087566
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4647 bases
Position: chrKL652687.1:911385-916031
Accession: 107087566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025790	PseudoU_synth_2	PF00849.22	2.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000746	-	1941	XM_015379213	ENSCVAP00000025790	552 (aa)	XP_015234699	UPI0007428652

Gene Model

Click here to download ENSCVAG00000010848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010848	rpusd2	86	58.058	ENSG00000166133	RPUSD2	80	60.314	Homo_sapiens
ENSCVAG00000010848	rpusd2	99	71.330	ENSAPOG00000000817	rpusd2	92	75.047	Acanthochromis_polyacanthus
ENSCVAG00000010848	rpusd2	90	56.064	ENSAMEG00000016996	RPUSD2	80	60.045	Ailuropoda_melanoleuca
ENSCVAG00000010848	rpusd2	88	80.448	ENSACIG00000024029	rpusd2	97	80.448	Amphilophus_citrinellus
ENSCVAG00000010848	rpusd2	99	71.773	ENSAOCG00000015237	rpusd2	92	75.468	Amphiprion_ocellaris
ENSCVAG00000010848	rpusd2	99	71.429	ENSAPEG00000021763	rpusd2	92	75.094	Amphiprion_percula
ENSCVAG00000010848	rpusd2	93	72.581	ENSATEG00000015242	rpusd2	91	73.492	Anabas_testudineus
ENSCVAG00000010848	rpusd2	77	60.613	ENSAPLG00000004723	RPUSD2	100	60.613	Anas_platyrhynchos
ENSCVAG00000010848	rpusd2	79	61.659	ENSACAG00000013893	RPUSD2	91	61.659	Anolis_carolinensis
ENSCVAG00000010848	rpusd2	90	56.324	ENSANAG00000009691	RPUSD2	80	60.045	Aotus_nancymaae
ENSCVAG00000010848	rpusd2	90	75.475	ENSACLG00000019531	rpusd2	91	75.475	Astatotilapia_calliptera
ENSCVAG00000010848	rpusd2	80	66.804	ENSAMXG00000013376	rpusd2	88	65.421	Astyanax_mexicanus
ENSCVAG00000010848	rpusd2	82	59.565	ENSBTAG00000003193	RPUSD2	79	60.360	Bos_taurus
ENSCVAG00000010848	rpusd2	85	32.484	WBGene00019498	K07E8.7	97	34.577	Caenorhabditis_elegans
ENSCVAG00000010848	rpusd2	82	58.621	ENSCJAG00000020841	RPUSD2	80	59.375	Callithrix_jacchus
ENSCVAG00000010848	rpusd2	90	55.467	ENSCAFG00000009165	RPUSD2	79	59.594	Canis_familiaris
ENSCVAG00000010848	rpusd2	90	55.268	ENSCAFG00020005849	RPUSD2	79	59.594	Canis_lupus_dingo
ENSCVAG00000010848	rpusd2	82	58.940	ENSCHIG00000006152	RPUSD2	89	54.635	Capra_hircus
ENSCVAG00000010848	rpusd2	90	56.016	ENSTSYG00000012844	RPUSD2	88	55.227	Carlito_syrichta
ENSCVAG00000010848	rpusd2	88	56.250	ENSCPOG00000013201	RPUSD2	80	59.865	Cavia_porcellus
ENSCVAG00000010848	rpusd2	82	59.052	ENSCCAG00000024378	RPUSD2	80	59.821	Cebus_capucinus
ENSCVAG00000010848	rpusd2	86	58.125	ENSCATG00000043734	RPUSD2	80	60.271	Cercocebus_atys
ENSCVAG00000010848	rpusd2	84	58.531	ENSCLAG00000011862	RPUSD2	80	60.274	Chinchilla_lanigera
ENSCVAG00000010848	rpusd2	82	59.524	ENSCSAG00000007538	RPUSD2	86	60.314	Chlorocebus_sabaeus
ENSCVAG00000010848	rpusd2	62	56.647	ENSCHOG00000004834	RPUSD2	63	56.647	Choloepus_hoffmanni
ENSCVAG00000010848	rpusd2	82	59.588	ENSCPBG00000013419	RPUSD2	88	60.128	Chrysemys_picta_bellii
ENSCVAG00000010848	rpusd2	86	58.333	ENSCANG00000003659	RPUSD2	80	60.045	Colobus_angolensis_palliatus
ENSCVAG00000010848	rpusd2	89	58.551	ENSCGRG00001009839	Rpusd2	76	61.883	Cricetulus_griseus_chok1gshd
ENSCVAG00000010848	rpusd2	89	58.551	ENSCGRG00000012348	Rpusd2	78	61.883	Cricetulus_griseus_crigri
ENSCVAG00000010848	rpusd2	91	68.391	ENSCSEG00000001953	rpusd2	89	68.391	Cynoglossus_semilaevis
ENSCVAG00000010848	rpusd2	87	69.495	ENSDARG00000060992	rpusd2	84	69.819	Danio_rerio
ENSCVAG00000010848	rpusd2	89	56.375	ENSDNOG00000047745	RPUSD2	81	59.284	Dasypus_novemcinctus
ENSCVAG00000010848	rpusd2	79	60.641	ENSDORG00000009092	Rpusd2	99	60.641	Dipodomys_ordii
ENSCVAG00000010848	rpusd2	77	48.492	FBgn0032256	RluA-2	78	48.492	Drosophila_melanogaster
ENSCVAG00000010848	rpusd2	78	45.824	FBgn0051719	RluA-1	63	45.824	Drosophila_melanogaster
ENSCVAG00000010848	rpusd2	94	54.784	ENSETEG00000008581	RPUSD2	98	54.631	Echinops_telfairi
ENSCVAG00000010848	rpusd2	75	35.484	ENSEBUG00000012149	rpusd2	83	35.484	Eptatretus_burgeri
ENSCVAG00000010848	rpusd2	90	55.534	ENSEASG00005016463	RPUSD2	78	59.060	Equus_asinus_asinus
ENSCVAG00000010848	rpusd2	90	55.534	ENSECAG00000024178	RPUSD2	78	59.060	Equus_caballus
ENSCVAG00000010848	rpusd2	91	48.936	ENSEEUG00000005132	RPUSD2	95	48.249	Erinaceus_europaeus
ENSCVAG00000010848	rpusd2	89	67.850	ENSELUG00000016786	rpusd2	91	67.258	Esox_lucius
ENSCVAG00000010848	rpusd2	88	56.212	ENSFCAG00000040796	RPUSD2	79	59.594	Felis_catus
ENSCVAG00000010848	rpusd2	78	61.872	ENSFALG00000001122	RPUSD2	97	62.054	Ficedula_albicollis
ENSCVAG00000010848	rpusd2	84	58.849	ENSFDAG00000003070	RPUSD2	85	60.455	Fukomys_damarensis
ENSCVAG00000010848	rpusd2	100	80.605	ENSFHEG00000007518	rpusd2	100	80.605	Fundulus_heteroclitus
ENSCVAG00000010848	rpusd2	85	72.765	ENSGMOG00000011014	rpusd2	98	72.614	Gadus_morhua
ENSCVAG00000010848	rpusd2	80	61.123	ENSGALG00000041216	RPUSD2	94	61.388	Gallus_gallus
ENSCVAG00000010848	rpusd2	100	78.481	ENSGAFG00000003390	rpusd2	97	78.481	Gambusia_affinis
ENSCVAG00000010848	rpusd2	87	74.603	ENSGACG00000008656	rpusd2	96	74.603	Gasterosteus_aculeatus
ENSCVAG00000010848	rpusd2	89	59.476	ENSGAGG00000013098	RPUSD2	94	58.669	Gopherus_agassizii
ENSCVAG00000010848	rpusd2	86	57.645	ENSGGOG00000006684	RPUSD2	80	59.865	Gorilla_gorilla
ENSCVAG00000010848	rpusd2	90	75.285	ENSHBUG00000023777	rpusd2	91	75.285	Haplochromis_burtoni
ENSCVAG00000010848	rpusd2	84	57.325	ENSHGLG00000012765	RPUSD2	80	58.969	Heterocephalus_glaber_female
ENSCVAG00000010848	rpusd2	84	57.325	ENSHGLG00100006653	RPUSD2	80	58.969	Heterocephalus_glaber_male
ENSCVAG00000010848	rpusd2	89	73.477	ENSHCOG00000015587	rpusd2	87	73.477	Hippocampus_comes
ENSCVAG00000010848	rpusd2	88	68.952	ENSIPUG00000021006	rpusd2	83	68.507	Ictalurus_punctatus
ENSCVAG00000010848	rpusd2	85	58.958	ENSSTOG00000025619	RPUSD2	79	60.444	Ictidomys_tridecemlineatus
ENSCVAG00000010848	rpusd2	80	61.591	ENSJJAG00000023160	Rpusd2	82	61.591	Jaculus_jaculus
ENSCVAG00000010848	rpusd2	99	69.915	ENSKMAG00000006618	rpusd2	98	70.427	Kryptolebias_marmoratus
ENSCVAG00000010848	rpusd2	89	75.342	ENSLBEG00000021571	rpusd2	94	72.527	Labrus_bergylta
ENSCVAG00000010848	rpusd2	79	60.526	ENSLACG00000017338	RPUSD2	99	60.526	Latimeria_chalumnae
ENSCVAG00000010848	rpusd2	87	67.975	ENSLOCG00000014755	rpusd2	97	67.975	Lepisosteus_oculatus
ENSCVAG00000010848	rpusd2	82	59.913	ENSLAFG00000015588	RPUSD2	83	60.538	Loxodonta_africana
ENSCVAG00000010848	rpusd2	82	59.740	ENSMFAG00000045062	RPUSD2	80	60.538	Macaca_fascicularis
ENSCVAG00000010848	rpusd2	86	58.592	ENSMMUG00000001483	RPUSD2	80	60.538	Macaca_mulatta
ENSCVAG00000010848	rpusd2	86	50.823	ENSMNEG00000041429	RPUSD2	80	52.339	Macaca_nemestrina
ENSCVAG00000010848	rpusd2	62	58.000	ENSMLEG00000036551	RPUSD2	80	58.000	Mandrillus_leucophaeus
ENSCVAG00000010848	rpusd2	87	74.131	ENSMAMG00000001077	rpusd2	85	74.131	Mastacembelus_armatus
ENSCVAG00000010848	rpusd2	88	76.608	ENSMZEG00005006947	rpusd2	99	75.862	Maylandia_zebra
ENSCVAG00000010848	rpusd2	80	61.184	ENSMGAG00000003058	RPUSD2	97	61.454	Meleagris_gallopavo
ENSCVAG00000010848	rpusd2	83	59.615	ENSMAUG00000020467	Rpusd2	78	60.850	Mesocricetus_auratus
ENSCVAG00000010848	rpusd2	94	54.281	ENSMICG00000028637	RPUSD2	80	60.310	Microcebus_murinus
ENSCVAG00000010848	rpusd2	89	57.895	ENSMOCG00000020061	Rpusd2	79	61.486	Microtus_ochrogaster
ENSCVAG00000010848	rpusd2	89	79.010	ENSMMOG00000012020	rpusd2	93	76.371	Mola_mola
ENSCVAG00000010848	rpusd2	83	59.870	ENSMODG00000000300	RPUSD2	80	60.948	Monodelphis_domestica
ENSCVAG00000010848	rpusd2	93	69.495	ENSMALG00000010024	rpusd2	92	70.000	Monopterus_albus
ENSCVAG00000010848	rpusd2	88	58.078	MGP_CAROLIEiJ_G0024130	Rpusd2	78	61.451	Mus_caroli
ENSCVAG00000010848	rpusd2	88	57.172	ENSMUSG00000027324	Rpusd2	78	60.403	Mus_musculus
ENSCVAG00000010848	rpusd2	88	57.746	MGP_PahariEiJ_G0025573	Rpusd2	78	60.811	Mus_pahari
ENSCVAG00000010848	rpusd2	88	57.374	MGP_SPRETEiJ_G0025046	Rpusd2	79	60.626	Mus_spretus
ENSCVAG00000010848	rpusd2	84	58.849	ENSMPUG00000008517	RPUSD2	79	60.722	Mustela_putorius_furo
ENSCVAG00000010848	rpusd2	82	60.131	ENSMLUG00000007971	RPUSD2	87	60.811	Myotis_lucifugus
ENSCVAG00000010848	rpusd2	90	57.258	ENSNGAG00000014126	Rpusd2	80	61.364	Nannospalax_galili
ENSCVAG00000010848	rpusd2	90	77.362	ENSNBRG00000010070	rpusd2	91	77.362	Neolamprologus_brichardi
ENSCVAG00000010848	rpusd2	87	56.911	ENSNLEG00000035735	RPUSD2	80	60.314	Nomascus_leucogenys
ENSCVAG00000010848	rpusd2	95	56.629	ENSMEUG00000008500	RPUSD2	98	56.167	Notamacropus_eugenii
ENSCVAG00000010848	rpusd2	82	59.211	ENSOPRG00000014177	-	81	60.000	Ochotona_princeps
ENSCVAG00000010848	rpusd2	90	56.548	ENSODEG00000017193	RPUSD2	81	60.538	Octodon_degus
ENSCVAG00000010848	rpusd2	86	81.042	ENSONIG00000020102	rpusd2	95	81.042	Oreochromis_niloticus
ENSCVAG00000010848	rpusd2	82	59.737	ENSOCUG00000015745	RPUSD2	78	60.544	Oryctolagus_cuniculus
ENSCVAG00000010848	rpusd2	94	72.023	ENSORLG00000015516	rpusd2	94	72.023	Oryzias_latipes
ENSCVAG00000010848	rpusd2	95	69.590	ENSORLG00020010533	rpusd2	95	69.590	Oryzias_latipes_hni
ENSCVAG00000010848	rpusd2	94	69.663	ENSORLG00015009206	rpusd2	94	69.663	Oryzias_latipes_hsok
ENSCVAG00000010848	rpusd2	90	74.950	ENSOMEG00000007355	rpusd2	83	74.950	Oryzias_melastigma
ENSCVAG00000010848	rpusd2	82	58.621	ENSOGAG00000004867	RPUSD2	84	59.375	Otolemur_garnettii
ENSCVAG00000010848	rpusd2	80	59.773	ENSOARG00000020235	RPUSD2	89	55.754	Ovis_aries
ENSCVAG00000010848	rpusd2	86	58.058	ENSPPAG00000032874	RPUSD2	80	60.314	Pan_paniscus
ENSCVAG00000010848	rpusd2	84	57.996	ENSPPRG00000010446	RPUSD2	80	59.819	Panthera_pardus
ENSCVAG00000010848	rpusd2	84	57.996	ENSPTIG00000013316	RPUSD2	80	59.819	Panthera_tigris_altaica
ENSCVAG00000010848	rpusd2	86	58.058	ENSPTRG00000006924	RPUSD2	80	60.314	Pan_troglodytes
ENSCVAG00000010848	rpusd2	86	57.971	ENSPANG00000019339	RPUSD2	80	60.090	Papio_anubis
ENSCVAG00000010848	rpusd2	90	60.954	ENSPKIG00000023017	rpusd2	84	60.954	Paramormyrops_kingsleyae
ENSCVAG00000010848	rpusd2	62	59.599	ENSPSIG00000012680	RPUSD2	100	59.599	Pelodiscus_sinensis
ENSCVAG00000010848	rpusd2	86	74.214	ENSPMGG00000018165	rpusd2	84	74.214	Periophthalmus_magnuspinnatus
ENSCVAG00000010848	rpusd2	84	58.351	ENSPEMG00000012878	Rpusd2	82	59.545	Peromyscus_maniculatus_bairdii
ENSCVAG00000010848	rpusd2	83	59.389	ENSPCIG00000023199	RPUSD2	80	60.227	Phascolarctos_cinereus
ENSCVAG00000010848	rpusd2	100	79.204	ENSPFOG00000006829	rpusd2	98	79.204	Poecilia_formosa
ENSCVAG00000010848	rpusd2	90	83.534	ENSPLAG00000022914	rpusd2	100	83.534	Poecilia_latipinna
ENSCVAG00000010848	rpusd2	100	79.204	ENSPMEG00000009835	rpusd2	100	83.735	Poecilia_mexicana
ENSCVAG00000010848	rpusd2	100	79.496	ENSPREG00000016441	rpusd2	95	79.279	Poecilia_reticulata
ENSCVAG00000010848	rpusd2	86	57.557	ENSPPYG00000006355	RPUSD2	80	59.775	Pongo_abelii
ENSCVAG00000010848	rpusd2	85	57.741	ENSPCOG00000028019	RPUSD2	80	59.598	Propithecus_coquereli
ENSCVAG00000010848	rpusd2	93	53.160	ENSPVAG00000001837	RPUSD2	80	59.819	Pteropus_vampyrus
ENSCVAG00000010848	rpusd2	85	81.915	ENSPNYG00000021507	rpusd2	93	81.915	Pundamilia_nyererei
ENSCVAG00000010848	rpusd2	88	56.674	ENSRNOG00000010528	LOC100911166	82	56.667	Rattus_norvegicus
ENSCVAG00000010848	rpusd2	88	56.674	ENSRNOG00000046797	Rpusd2	82	56.667	Rattus_norvegicus
ENSCVAG00000010848	rpusd2	86	58.385	ENSRBIG00000030813	RPUSD2	80	60.090	Rhinopithecus_bieti
ENSCVAG00000010848	rpusd2	86	58.178	ENSRROG00000026664	RPUSD2	80	59.865	Rhinopithecus_roxellana
ENSCVAG00000010848	rpusd2	74	37.767	YOL066C	RIB2	61	37.767	Saccharomyces_cerevisiae
ENSCVAG00000010848	rpusd2	82	59.052	ENSSBOG00000035031	RPUSD2	80	59.821	Saimiri_boliviensis_boliviensis
ENSCVAG00000010848	rpusd2	63	58.571	ENSSHAG00000015108	RPUSD2	91	58.571	Sarcophilus_harrisii
ENSCVAG00000010848	rpusd2	87	59.206	ENSSFOG00015019057	rpusd2	77	61.089	Scleropages_formosus
ENSCVAG00000010848	rpusd2	90	75.283	ENSSMAG00000000903	rpusd2	97	76.654	Scophthalmus_maximus
ENSCVAG00000010848	rpusd2	99	70.167	ENSSDUG00000019139	rpusd2	99	70.167	Seriola_dumerili
ENSCVAG00000010848	rpusd2	99	70.333	ENSSLDG00000005938	rpusd2	99	70.333	Seriola_lalandi_dorsalis
ENSCVAG00000010848	rpusd2	90	57.171	ENSSARG00000002792	RPUSD2	89	56.582	Sorex_araneus
ENSCVAG00000010848	rpusd2	85	57.320	ENSSPUG00000001206	RPUSD2	89	59.081	Sphenodon_punctatus
ENSCVAG00000010848	rpusd2	99	72.504	ENSSPAG00000003578	rpusd2	99	70.377	Stegastes_partitus
ENSCVAG00000010848	rpusd2	89	56.942	ENSSSCG00000036700	RPUSD2	79	60.360	Sus_scrofa
ENSCVAG00000010848	rpusd2	88	73.614	ENSTRUG00000025880	rpusd2	98	74.280	Takifugu_rubripes
ENSCVAG00000010848	rpusd2	89	74.900	ENSTNIG00000017329	rpusd2	100	74.900	Tetraodon_nigroviridis
ENSCVAG00000010848	rpusd2	84	51.907	ENSTBEG00000007933	RPUSD2	80	53.139	Tupaia_belangeri
ENSCVAG00000010848	rpusd2	91	54.286	ENSTTRG00000010585	RPUSD2	80	59.955	Tursiops_truncatus
ENSCVAG00000010848	rpusd2	84	58.723	ENSUAMG00000001470	RPUSD2	86	60.586	Ursus_americanus
ENSCVAG00000010848	rpusd2	84	58.723	ENSUMAG00000012487	RPUSD2	70	60.586	Ursus_maritimus
ENSCVAG00000010848	rpusd2	82	60.352	ENSVPAG00000003844	RPUSD2	80	61.086	Vicugna_pacos
ENSCVAG00000010848	rpusd2	86	56.315	ENSVVUG00000026590	RPUSD2	79	58.744	Vulpes_vulpes
ENSCVAG00000010848	rpusd2	84	59.746	ENSXETG00000015973	rpusd2	95	61.298	Xenopus_tropicalis
ENSCVAG00000010848	rpusd2	100	78.662	ENSXMAG00000021821	rpusd2	100	82.329	Xiphophorus_maculatus