EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010868 (Gene tree)
Gene ID: 107083131
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5489 bases
Position: chrKL652569.1:1545601-1551089
Accession: 107083131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025793	RRM_1	PF00076.22	6.3e-18	1	1
ENSCVAP00000008971	RRM_1	PF00076.22	6.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000716	RNPS1-201	1242	XM_015372131	ENSCVAP00000025793	280 (aa)	XP_015227617	UPI0007428674
ENSCVAT00000000721	RNPS1-202	1398	-	ENSCVAP00000008971	288 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000010868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010868	RNPS1	75	64.815	ENSG00000205937	RNPS1	86	65.306	Homo_sapiens
ENSCVAG00000010868	RNPS1	77	80.930	ENSAPOG00000017310	RNPS1	72	76.577	Acanthochromis_polyacanthus
ENSCVAG00000010868	RNPS1	76	70.093	ENSACIG00000014367	-	77	71.759	Amphilophus_citrinellus
ENSCVAG00000010868	RNPS1	77	75.000	ENSAOCG00000002404	RNPS1	77	84.651	Amphiprion_ocellaris
ENSCVAG00000010868	RNPS1	77	73.991	ENSAPEG00000006497	RNPS1	76	75.785	Amphiprion_percula
ENSCVAG00000010868	RNPS1	77	80.093	ENSATEG00000024267	RNPS1	77	85.581	Anabas_testudineus
ENSCVAG00000010868	RNPS1	75	50.455	ENSAPLG00000006231	RNPS1	51	77.670	Anas_platyrhynchos
ENSCVAG00000010868	RNPS1	75	64.352	ENSANAG00000028802	RNPS1	77	70.507	Aotus_nancymaae
ENSCVAG00000010868	RNPS1	76	66.667	ENSACLG00000021537	-	84	69.333	Astatotilapia_calliptera
ENSCVAG00000010868	RNPS1	77	78.605	ENSACLG00000025942	RNPS1	77	77.674	Astatotilapia_calliptera
ENSCVAG00000010868	RNPS1	77	69.333	ENSAMXG00000037447	RNPS1	69	75.336	Astyanax_mexicanus
ENSCVAG00000010868	RNPS1	77	73.853	ENSAMXG00000006330	-	81	67.327	Astyanax_mexicanus
ENSCVAG00000010868	RNPS1	75	64.815	ENSBTAG00000009969	RNPS1	77	70.968	Bos_taurus
ENSCVAG00000010868	RNPS1	75	64.815	ENSCJAG00000014969	RNPS1	90	65.741	Callithrix_jacchus
ENSCVAG00000010868	RNPS1	75	64.815	ENSTSYG00000001629	RNPS1	77	70.968	Carlito_syrichta
ENSCVAG00000010868	RNPS1	75	64.815	ENSCPOG00000002066	RNPS1	77	70.968	Cavia_porcellus
ENSCVAG00000010868	RNPS1	75	64.352	ENSCCAG00000034480	RNPS1	77	70.507	Cebus_capucinus
ENSCVAG00000010868	RNPS1	75	64.815	ENSCATG00000013756	RNPS1	84	67.647	Cercocebus_atys
ENSCVAG00000010868	RNPS1	75	64.815	ENSCLAG00000015546	RNPS1	76	70.833	Chinchilla_lanigera
ENSCVAG00000010868	RNPS1	76	69.266	ENSCSAG00000005219	-	72	67.742	Chlorocebus_sabaeus
ENSCVAG00000010868	RNPS1	75	64.486	ENSCHOG00000004866	RNPS1	71	70.833	Choloepus_hoffmanni
ENSCVAG00000010868	RNPS1	75	64.815	ENSCANG00000041307	RNPS1	85	67.805	Colobus_angolensis_palliatus
ENSCVAG00000010868	RNPS1	75	64.815	ENSCGRG00001020431	Rnps1	77	70.968	Cricetulus_griseus_chok1gshd
ENSCVAG00000010868	RNPS1	75	64.815	ENSCGRG00000014021	Rnps1	77	70.968	Cricetulus_griseus_crigri
ENSCVAG00000010868	RNPS1	76	77.315	ENSCSEG00000000402	RNPS1	71	70.046	Cynoglossus_semilaevis
ENSCVAG00000010868	RNPS1	76	73.023	ENSCSEG00000015997	RNPS1	76	82.949	Cynoglossus_semilaevis
ENSCVAG00000010868	RNPS1	77	72.603	ENSDARG00000100188	RNPS1	77	75.342	Danio_rerio
ENSCVAG00000010868	RNPS1	77	72.603	ENSDARG00000116743	rnps1	77	75.342	Danio_rerio
ENSCVAG00000010868	RNPS1	75	64.352	ENSDORG00000001755	Rnps1	77	70.507	Dipodomys_ordii
ENSCVAG00000010868	RNPS1	75	64.352	ENSFCAG00000007690	RNPS1	77	70.507	Felis_catus
ENSCVAG00000010868	RNPS1	75	64.352	ENSFDAG00000003386	RNPS1	77	70.507	Fukomys_damarensis
ENSCVAG00000010868	RNPS1	100	96.441	ENSFHEG00000011705	RNPS1	100	96.441	Fundulus_heteroclitus
ENSCVAG00000010868	RNPS1	73	64.651	ENSGALG00000009288	RNPS1	77	70.455	Gallus_gallus
ENSCVAG00000010868	RNPS1	100	97.143	ENSGAFG00000005457	RNPS1	100	97.143	Gambusia_affinis
ENSCVAG00000010868	RNPS1	77	80.184	ENSGACG00000011261	RNPS1	77	89.401	Gasterosteus_aculeatus
ENSCVAG00000010868	RNPS1	77	66.820	ENSGACG00000005641	-	77	67.742	Gasterosteus_aculeatus
ENSCVAG00000010868	RNPS1	70	63.285	ENSGGOG00000026421	-	79	66.346	Gorilla_gorilla
ENSCVAG00000010868	RNPS1	75	64.815	ENSGGOG00000014275	RNPS1	86	67.476	Gorilla_gorilla
ENSCVAG00000010868	RNPS1	77	78.140	ENSHBUG00000002494	RNPS1	77	77.209	Haplochromis_burtoni
ENSCVAG00000010868	RNPS1	76	66.667	ENSHBUG00000017337	-	77	71.429	Haplochromis_burtoni
ENSCVAG00000010868	RNPS1	75	64.815	ENSHGLG00000013957	RNPS1	77	70.968	Heterocephalus_glaber_female
ENSCVAG00000010868	RNPS1	75	65.741	ENSHGLG00100001721	-	70	61.927	Heterocephalus_glaber_male
ENSCVAG00000010868	RNPS1	75	64.815	ENSHGLG00100003539	RNPS1	77	70.968	Heterocephalus_glaber_male
ENSCVAG00000010868	RNPS1	75	57.339	ENSHGLG00100017879	-	73	54.545	Heterocephalus_glaber_male
ENSCVAG00000010868	RNPS1	75	80.184	ENSHCOG00000004424	RNPS1	78	81.448	Hippocampus_comes
ENSCVAG00000010868	RNPS1	77	71.041	ENSIPUG00000011746	rnps1	85	74.208	Ictalurus_punctatus
ENSCVAG00000010868	RNPS1	75	64.815	ENSJJAG00000015576	-	77	70.968	Jaculus_jaculus
ENSCVAG00000010868	RNPS1	76	93.427	ENSKMAG00000009135	RNPS1	77	93.488	Kryptolebias_marmoratus
ENSCVAG00000010868	RNPS1	75	76.190	ENSLBEG00000024091	RNPS1	77	76.636	Labrus_bergylta
ENSCVAG00000010868	RNPS1	77	66.972	ENSLOCG00000001758	RNPS1	77	66.972	Lepisosteus_oculatus
ENSCVAG00000010868	RNPS1	79	65.789	ENSMFAG00000044121	-	75	62.844	Macaca_fascicularis
ENSCVAG00000010868	RNPS1	75	64.815	ENSMFAG00000042142	RNPS1	77	70.968	Macaca_fascicularis
ENSCVAG00000010868	RNPS1	71	64.706	ENSMMUG00000019238	-	79	67.647	Macaca_mulatta
ENSCVAG00000010868	RNPS1	72	65.385	ENSMLEG00000040232	-	80	65.700	Mandrillus_leucophaeus
ENSCVAG00000010868	RNPS1	75	64.815	ENSMLEG00000036928	RNPS1	77	70.968	Mandrillus_leucophaeus
ENSCVAG00000010868	RNPS1	76	79.167	ENSMAMG00000021148	-	78	73.543	Mastacembelus_armatus
ENSCVAG00000010868	RNPS1	76	80.841	ENSMAMG00000021609	-	77	83.796	Mastacembelus_armatus
ENSCVAG00000010868	RNPS1	77	66.820	ENSMZEG00005006256	-	78	71.429	Maylandia_zebra
ENSCVAG00000010868	RNPS1	77	78.605	ENSMZEG00005012742	RNPS1	77	77.674	Maylandia_zebra
ENSCVAG00000010868	RNPS1	75	64.352	ENSMICG00000031543	RNPS1	77	70.507	Microcebus_murinus
ENSCVAG00000010868	RNPS1	75	64.815	ENSMOCG00000003429	Rnps1	77	70.968	Microtus_ochrogaster
ENSCVAG00000010868	RNPS1	76	75.000	ENSMMOG00000010863	RNPS1	77	75.701	Mola_mola
ENSCVAG00000010868	RNPS1	76	77.465	ENSMALG00000016619	RNPS1	68	80.465	Monopterus_albus
ENSCVAG00000010868	RNPS1	75	64.815	ENSMUSG00000034681	Rnps1	77	70.968	Mus_musculus
ENSCVAG00000010868	RNPS1	75	64.815	MGP_PahariEiJ_G0023498	Rnps1	77	70.968	Mus_pahari
ENSCVAG00000010868	RNPS1	75	64.815	MGP_SPRETEiJ_G0022092	Rnps1	77	70.968	Mus_spretus
ENSCVAG00000010868	RNPS1	75	64.815	ENSNGAG00000023702	Rnps1	77	70.968	Nannospalax_galili
ENSCVAG00000010868	RNPS1	76	67.290	ENSNBRG00000014540	-	79	71.429	Neolamprologus_brichardi
ENSCVAG00000010868	RNPS1	76	74.766	ENSNBRG00000023437	RNPS1	77	75.234	Neolamprologus_brichardi
ENSCVAG00000010868	RNPS1	88	65.339	ENSNLEG00000009243	RNPS1	87	70.507	Nomascus_leucogenys
ENSCVAG00000010868	RNPS1	77	66.820	ENSONIG00000019627	-	78	71.429	Oreochromis_niloticus
ENSCVAG00000010868	RNPS1	77	76.279	ENSORLG00000008033	RNPS1	94	71.220	Oryzias_latipes
ENSCVAG00000010868	RNPS1	76	77.103	ENSORLG00020020207	RNPS1	76	72.300	Oryzias_latipes_hni
ENSCVAG00000010868	RNPS1	76	76.636	ENSORLG00015000305	-	76	71.831	Oryzias_latipes_hsok
ENSCVAG00000010868	RNPS1	75	58.403	ENSORLG00015011183	RNPS1	67	69.626	Oryzias_latipes_hsok
ENSCVAG00000010868	RNPS1	69	63.415	ENSPPAG00000037836	-	86	67.476	Pan_paniscus
ENSCVAG00000010868	RNPS1	87	60.484	ENSPPAG00000011845	RNPS1	81	63.303	Pan_paniscus
ENSCVAG00000010868	RNPS1	75	64.352	ENSPPRG00000011255	RNPS1	77	70.507	Panthera_pardus
ENSCVAG00000010868	RNPS1	50	61.871	ENSPTIG00000015643	RNPS1	53	79.208	Panthera_tigris_altaica
ENSCVAG00000010868	RNPS1	72	63.942	ENSPTRG00000046326	-	81	66.827	Pan_troglodytes
ENSCVAG00000010868	RNPS1	75	64.815	ENSPTRG00000031310	RNPS1	77	70.968	Pan_troglodytes
ENSCVAG00000010868	RNPS1	75	64.815	ENSPANG00000015748	RNPS1	77	70.968	Papio_anubis
ENSCVAG00000010868	RNPS1	77	72.273	ENSPKIG00000023465	RNPS1	77	68.636	Paramormyrops_kingsleyae
ENSCVAG00000010868	RNPS1	68	73.016	ENSPMGG00000015888	-	77	74.299	Periophthalmus_magnuspinnatus
ENSCVAG00000010868	RNPS1	75	64.815	ENSPEMG00000012797	Rnps1	77	70.968	Peromyscus_maniculatus_bairdii
ENSCVAG00000010868	RNPS1	75	65.278	ENSPCIG00000025012	RNPS1	77	71.889	Phascolarctos_cinereus
ENSCVAG00000010868	RNPS1	100	97.500	ENSPFOG00000009978	RNPS1	100	97.500	Poecilia_formosa
ENSCVAG00000010868	RNPS1	100	97.500	ENSPLAG00000009343	RNPS1	100	97.500	Poecilia_latipinna
ENSCVAG00000010868	RNPS1	100	97.500	ENSPMEG00000008552	RNPS1	100	97.500	Poecilia_mexicana
ENSCVAG00000010868	RNPS1	100	97.500	ENSPREG00000001843	RNPS1	100	97.500	Poecilia_reticulata
ENSCVAG00000010868	RNPS1	75	64.352	ENSPCOG00000005478	RNPS1	82	67.157	Propithecus_coquereli
ENSCVAG00000010868	RNPS1	77	78.605	ENSPNYG00000000585	RNPS1	77	77.674	Pundamilia_nyererei
ENSCVAG00000010868	RNPS1	77	75.229	ENSPNAG00000025479	RNPS1	77	71.101	Pygocentrus_nattereri
ENSCVAG00000010868	RNPS1	72	63.981	ENSRBIG00000038965	-	92	63.111	Rhinopithecus_bieti
ENSCVAG00000010868	RNPS1	75	64.815	ENSRROG00000041252	RNPS1	85	67.805	Rhinopithecus_roxellana
ENSCVAG00000010868	RNPS1	75	64.815	ENSSBOG00000027927	RNPS1	77	70.968	Saimiri_boliviensis_boliviensis
ENSCVAG00000010868	RNPS1	75	79.812	ENSSFOG00015019341	-	73	78.818	Scleropages_formosus
ENSCVAG00000010868	RNPS1	78	77.027	ENSSFOG00015022746	RNPS1	80	72.273	Scleropages_formosus
ENSCVAG00000010868	RNPS1	77	82.791	ENSSMAG00000016933	RNPS1	77	81.395	Scophthalmus_maximus
ENSCVAG00000010868	RNPS1	77	80.093	ENSSDUG00000011453	RNPS1	77	82.870	Seriola_dumerili
ENSCVAG00000010868	RNPS1	74	82.692	ENSSLDG00000021341	RNPS1	76	79.808	Seriola_lalandi_dorsalis
ENSCVAG00000010868	RNPS1	77	78.241	ENSSPAG00000009383	RNPS1	77	83.721	Stegastes_partitus
ENSCVAG00000010868	RNPS1	75	63.721	ENSTGUG00000003237	RNPS1	77	69.545	Taeniopygia_guttata
ENSCVAG00000010868	RNPS1	76	73.611	ENSTRUG00000008602	RNPS1	77	76.147	Takifugu_rubripes
ENSCVAG00000010868	RNPS1	76	76.279	ENSTNIG00000009753	RNPS1	76	78.802	Tetraodon_nigroviridis
ENSCVAG00000010868	RNPS1	84	69.262	ENSXETG00000024439	rnps1	78	68.595	Xenopus_tropicalis
ENSCVAG00000010868	RNPS1	100	97.143	ENSXMAG00000004827	RNPS1	100	97.143	Xiphophorus_maculatus