EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000010877 (Gene tree)
Gene ID: 107087006
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 5B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10565 bases
Position: chrKL652670.1:242799-253363
Accession: 107087006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025806	zf-C2H2	PF00096.26	2.3e-14	1	2
ENSCVAP00000025806	zf-C2H2	PF00096.26	2.3e-14	2	2
ENSCVAP00000025806	zf-met	PF12874.7	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000704	-	4028	XM_015378332	ENSCVAP00000025806	439 (aa)	XP_015233818	UPI00074278F5

Gene Model

Click here to download ENSCVAG00000010877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010877	-	100	50.106	ENSORLG00000027494	-	89	50.743	Oryzias_latipes
ENSCVAG00000010877	-	100	50.427	ENSORLG00020019354	-	89	51.068	Oryzias_latipes_hni
ENSCVAG00000010877	-	100	51.183	ENSORLG00015018295	-	97	52.043	Oryzias_latipes_hsok
ENSCVAG00000010877	-	100	51.562	ENSOMEG00000020943	-	92	51.562	Oryzias_melastigma
ENSCVAG00000010877	-	100	69.488	ENSPMEG00000006754	-	94	70.379	Poecilia_mexicana
ENSCVAG00000010877	-	100	68.764	ENSPREG00000021116	-	94	69.866	Poecilia_reticulata