EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000010887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7718 bases
Position: chrKL652670.1:235240-242957
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025801	zf-C2H2	PF00096.26	1e-15	1	2
ENSCVAP00000025801	zf-C2H2	PF00096.26	1e-15	2	2
ENSCVAP00000025801	zf-met	PF12874.7	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000699	-	570	-	ENSCVAP00000025801	189 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000010887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000010887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000010887	-	61	47.674	ENSCVAG00000012216	-	80	47.674
ENSCVAG00000010887	-	79	47.436	ENSCVAG00000003417	-	66	47.436
ENSCVAG00000010887	-	52	41.860	ENSCVAG00000001568	-	68	41.860
ENSCVAG00000010887	-	76	54.667	ENSCVAG00000018383	-	85	53.247
ENSCVAG00000010887	-	74	43.210	ENSCVAG00000002252	-	90	43.210
ENSCVAG00000010887	-	56	43.182	ENSCVAG00000007073	-	72	43.860
ENSCVAG00000010887	-	51	40.206	ENSCVAG00000020141	-	62	40.206
ENSCVAG00000010887	-	52	46.032	ENSCVAG00000009103	-	88	46.032
ENSCVAG00000010887	-	57	49.412	ENSCVAG00000012302	-	84	49.412
ENSCVAG00000010887	-	54	50.649	ENSCVAG00000002242	-	90	50.649
ENSCVAG00000010887	-	50	49.057	ENSCVAG00000004508	-	60	49.057
ENSCVAG00000010887	-	50	50.000	ENSCVAG00000012520	-	75	50.000
ENSCVAG00000010887	-	51	48.750	ENSCVAG00000009747	-	53	48.750
ENSCVAG00000010887	-	51	45.283	ENSCVAG00000011213	-	91	44.615
ENSCVAG00000010887	-	51	45.349	ENSCVAG00000010160	-	76	45.349
ENSCVAG00000010887	-	63	49.123	ENSCVAG00000012180	-	92	48.276
ENSCVAG00000010887	-	51	47.500	ENSCVAG00000006667	-	50	47.500
ENSCVAG00000010887	-	63	46.067	ENSCVAG00000020126	-	76	46.067
ENSCVAG00000010887	-	53	45.055	ENSCVAG00000003396	-	59	45.055
ENSCVAG00000010887	-	56	47.368	ENSCVAG00000004958	-	59	47.368
ENSCVAG00000010887	-	50	46.575	ENSCVAG00000009827	-	96	46.575
ENSCVAG00000010887	-	95	43.478	ENSCVAG00000012543	-	99	50.000
ENSCVAG00000010887	-	59	46.753	ENSCVAG00000012284	-	78	46.753
ENSCVAG00000010887	-	95	46.512	ENSCVAG00000014322	-	93	46.512
ENSCVAG00000010887	-	60	47.436	ENSCVAG00000012399	-	90	47.436
ENSCVAG00000010887	-	56	50.794	ENSCVAG00000010442	-	98	50.000
ENSCVAG00000010887	-	67	47.436	ENSCVAG00000001417	-	97	47.436
ENSCVAG00000010887	-	51	47.778	ENSCVAG00000019764	-	60	47.778
ENSCVAG00000010887	-	50	49.180	ENSCVAG00000002488	-	72	49.180
ENSCVAG00000010887	-	54	50.000	ENSCVAG00000006673	-	54	50.000
ENSCVAG00000010887	-	60	47.619	ENSCVAG00000011469	-	84	47.619
ENSCVAG00000010887	-	75	46.032	ENSCVAG00000014622	-	60	46.032
ENSCVAG00000010887	-	56	45.000	ENSCVAG00000003250	-	60	45.000
ENSCVAG00000010887	-	56	43.590	ENSCVAG00000007051	-	98	43.590
ENSCVAG00000010887	-	54	44.578	ENSCVAG00000019705	-	65	44.578
ENSCVAG00000010887	-	53	52.500	ENSCVAG00000002506	-	96	52.500
ENSCVAG00000010887	-	89	50.000	ENSCVAG00000013337	-	92	56.962
ENSCVAG00000010887	-	54	49.351	ENSCVAG00000012248	-	90	49.351
ENSCVAG00000010887	-	52	44.186	ENSCVAG00000017515	-	89	44.186
ENSCVAG00000010887	-	100	50.000	ENSCVAG00000003497	-	92	50.000
ENSCVAG00000010887	-	77	43.373	ENSCVAG00000003601	ZNF319	69	43.373
ENSCVAG00000010887	-	84	47.619	ENSCVAG00000003512	-	97	47.619
ENSCVAG00000010887	-	87	39.362	ENSCVAG00000020968	-	64	39.362
ENSCVAG00000010887	-	77	44.086	ENSCVAG00000020414	-	64	44.086
ENSCVAG00000010887	-	52	48.718	ENSCVAG00000014269	-	91	45.000
ENSCVAG00000010887	-	53	48.718	ENSCVAG00000012343	-	88	48.718
ENSCVAG00000010887	-	56	51.316	ENSCVAG00000002500	-	85	51.316
ENSCVAG00000010887	-	58	45.545	ENSCVAG00000013382	-	59	45.545
ENSCVAG00000010887	-	53	47.761	ENSCVAG00000000419	-	65	47.761
ENSCVAG00000010887	-	55	52.564	ENSCVAG00000006460	-	70	52.564
ENSCVAG00000010887	-	51	46.753	ENSCVAG00000000144	-	65	46.753
ENSCVAG00000010887	-	53	45.455	ENSCVAG00000018507	-	74	43.860
ENSCVAG00000010887	-	83	48.718	ENSCVAG00000004368	-	73	48.718
ENSCVAG00000010887	-	64	50.000	ENSCVAG00000022991	-	90	46.739
ENSCVAG00000010887	-	52	42.353	ENSCVAG00000002307	-	63	42.353
ENSCVAG00000010887	-	61	43.182	ENSCVAG00000017511	-	90	43.182
ENSCVAG00000010887	-	57	48.214	ENSCVAG00000001444	-	97	48.214
ENSCVAG00000010887	-	70	46.753	ENSCVAG00000008836	-	66	46.753
ENSCVAG00000010887	-	83	49.351	ENSCVAG00000021107	-	93	51.316
ENSCVAG00000010887	-	56	46.154	ENSCVAG00000006389	-	95	46.154
ENSCVAG00000010887	-	53	43.750	ENSCVAG00000014404	-	93	43.750
ENSCVAG00000010887	-	88	42.222	ENSCVAG00000006484	-	63	42.222
ENSCVAG00000010887	-	50	47.458	ENSCVAG00000000423	-	90	47.458
ENSCVAG00000010887	-	61	47.297	ENSCVAG00000017890	-	88	45.882
ENSCVAG00000010887	-	51	45.902	ENSCVAG00000005494	-	89	45.902
ENSCVAG00000010887	-	53	53.448	ENSCVAG00000003428	-	94	53.448
ENSCVAG00000010887	-	52	44.262	ENSCVAG00000019646	-	67	44.262
ENSCVAG00000010887	-	69	45.455	ENSCVAG00000001369	-	76	45.455
ENSCVAG00000010887	-	60	43.210	ENSCVAG00000003434	-	73	43.210
ENSCVAG00000010887	-	51	50.000	ENSCVAG00000016796	-	80	50.000
ENSCVAG00000010887	-	53	53.571	ENSCVAG00000023054	-	58	53.571
ENSCVAG00000010887	-	54	50.943	ENSCVAG00000016862	-	90	50.943
ENSCVAG00000010887	-	50	47.059	ENSCVAG00000015153	-	73	47.059
ENSCVAG00000010887	-	51	45.882	ENSCVAG00000020745	-	98	44.706
ENSCVAG00000010887	-	54	50.649	ENSCVAG00000012228	-	80	50.649
ENSCVAG00000010887	-	56	42.500	ENSCVAG00000000351	-	58	42.500
ENSCVAG00000010887	-	93	47.191	ENSCVAG00000006491	-	79	47.191
ENSCVAG00000010887	-	54	42.857	ENSCVAG00000001609	-	76	43.636
ENSCVAG00000010887	-	55	47.727	ENSCVAG00000014734	-	90	48.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000010887	-	83	46.667	ENSAPOG00000021966	-	61	46.667	Acanthochromis_polyacanthus
ENSCVAG00000010887	-	51	46.753	ENSAPOG00000023008	-	60	46.753	Acanthochromis_polyacanthus
ENSCVAG00000010887	-	53	47.727	ENSAPOG00000009709	-	56	51.807	Acanthochromis_polyacanthus
ENSCVAG00000010887	-	51	47.619	ENSACIG00000022738	-	90	47.619	Amphilophus_citrinellus
ENSCVAG00000010887	-	62	44.186	ENSACIG00000007096	-	84	44.186	Amphilophus_citrinellus
ENSCVAG00000010887	-	84	40.984	ENSAOCG00000020652	-	66	40.984	Amphiprion_ocellaris
ENSCVAG00000010887	-	51	48.000	ENSAOCG00000016409	-	60	48.000	Amphiprion_ocellaris
ENSCVAG00000010887	-	54	46.667	ENSAOCG00000022529	-	52	46.667	Amphiprion_ocellaris
ENSCVAG00000010887	-	77	47.368	ENSAPEG00000009553	-	63	47.368	Amphiprion_percula
ENSCVAG00000010887	-	51	46.429	ENSAPEG00000008746	-	59	46.667	Amphiprion_percula
ENSCVAG00000010887	-	62	81.818	ENSATEG00000014684	-	92	84.091	Anabas_testudineus
ENSCVAG00000010887	-	57	50.000	ENSATEG00000022064	-	95	47.126	Anabas_testudineus
ENSCVAG00000010887	-	50	42.553	ENSATEG00000021602	-	68	42.553	Anabas_testudineus
ENSCVAG00000010887	-	56	48.750	ENSATEG00000015238	-	59	48.750	Anabas_testudineus
ENSCVAG00000010887	-	53	46.753	ENSACLG00000001368	-	84	46.753	Astatotilapia_calliptera
ENSCVAG00000010887	-	51	48.235	ENSACLG00000014365	-	90	48.235	Astatotilapia_calliptera
ENSCVAG00000010887	-	51	47.619	ENSACLG00000015462	-	61	47.619	Astatotilapia_calliptera
ENSCVAG00000010887	-	51	49.254	ENSACLG00000020333	-	74	49.254	Astatotilapia_calliptera
ENSCVAG00000010887	-	51	49.398	ENSACLG00000019349	-	69	49.398	Astatotilapia_calliptera
ENSCVAG00000010887	-	51	49.254	ENSACLG00000006718	-	74	49.254	Astatotilapia_calliptera
ENSCVAG00000010887	-	61	51.351	ENSACLG00000008374	-	54	51.351	Astatotilapia_calliptera
ENSCVAG00000010887	-	52	49.383	ENSAMXG00000007973	-	90	44.444	Astyanax_mexicanus
ENSCVAG00000010887	-	56	39.362	ENSCSEG00000019848	-	54	39.362	Cynoglossus_semilaevis
ENSCVAG00000010887	-	83	68.452	ENSFHEG00000008354	-	60	68.452	Fundulus_heteroclitus
ENSCVAG00000010887	-	51	45.882	ENSFHEG00000007985	-	76	40.351	Fundulus_heteroclitus
ENSCVAG00000010887	-	51	50.000	ENSFHEG00000013228	-	50	44.086	Fundulus_heteroclitus
ENSCVAG00000010887	-	51	47.423	ENSFHEG00000003460	-	62	47.423	Fundulus_heteroclitus
ENSCVAG00000010887	-	90	49.412	ENSGAFG00000001481	-	98	50.909	Gambusia_affinis
ENSCVAG00000010887	-	53	45.455	ENSGAFG00000007532	-	66	45.455	Gambusia_affinis
ENSCVAG00000010887	-	84	50.943	ENSHBUG00000020527	-	88	50.943	Haplochromis_burtoni
ENSCVAG00000010887	-	51	47.500	ENSHBUG00000009274	-	84	47.500	Haplochromis_burtoni
ENSCVAG00000010887	-	61	51.351	ENSHBUG00000017924	-	54	51.351	Haplochromis_burtoni
ENSCVAG00000010887	-	52	46.988	ENSHBUG00000013065	-	53	46.988	Haplochromis_burtoni
ENSCVAG00000010887	-	55	46.296	ENSHBUG00000020544	-	84	46.296	Haplochromis_burtoni
ENSCVAG00000010887	-	51	47.619	ENSHBUG00000019377	-	61	47.619	Haplochromis_burtoni
ENSCVAG00000010887	-	51	45.349	ENSIPUG00000022266	ZNF135	60	45.349	Ictalurus_punctatus
ENSCVAG00000010887	-	82	50.000	ENSKMAG00000015304	-	64	50.000	Kryptolebias_marmoratus
ENSCVAG00000010887	-	87	53.535	ENSLBEG00000009663	-	74	53.535	Labrus_bergylta
ENSCVAG00000010887	-	87	53.030	ENSLBEG00000026060	-	51	53.947	Labrus_bergylta
ENSCVAG00000010887	-	85	85.484	ENSLBEG00000026457	-	92	86.905	Labrus_bergylta
ENSCVAG00000010887	-	56	44.828	ENSLOCG00000017422	-	71	44.828	Lepisosteus_oculatus
ENSCVAG00000010887	-	52	49.438	ENSMAMG00000002083	-	93	49.438	Mastacembelus_armatus
ENSCVAG00000010887	-	56	47.674	ENSMAMG00000010902	-	58	47.674	Mastacembelus_armatus
ENSCVAG00000010887	-	52	46.250	ENSMZEG00005012676	-	88	46.250	Maylandia_zebra
ENSCVAG00000010887	-	55	46.053	ENSMZEG00005028563	-	79	46.053	Maylandia_zebra
ENSCVAG00000010887	-	53	47.945	ENSMZEG00005023565	-	74	47.945	Maylandia_zebra
ENSCVAG00000010887	-	50	47.619	ENSMZEG00005025125	-	91	47.619	Maylandia_zebra
ENSCVAG00000010887	-	55	44.872	ENSMZEG00005027551	-	91	53.846	Maylandia_zebra
ENSCVAG00000010887	-	51	49.254	ENSMZEG00005025965	-	69	49.254	Maylandia_zebra
ENSCVAG00000010887	-	51	47.619	ENSMZEG00005018502	-	61	47.619	Maylandia_zebra
ENSCVAG00000010887	-	51	51.562	ENSMZEG00005022884	-	89	49.091	Maylandia_zebra
ENSCVAG00000010887	-	50	46.875	ENSMZEG00005025725	-	95	46.875	Maylandia_zebra
ENSCVAG00000010887	-	61	51.351	ENSMZEG00005011431	-	76	44.643	Maylandia_zebra
ENSCVAG00000010887	-	83	48.810	ENSMMOG00000009252	-	77	48.810	Mola_mola
ENSCVAG00000010887	-	52	51.807	ENSMALG00000010959	-	88	51.807	Monopterus_albus
ENSCVAG00000010887	-	62	41.538	ENSMALG00000002956	-	97	41.538	Monopterus_albus
ENSCVAG00000010887	-	51	46.429	ENSMALG00000011756	-	78	46.429	Monopterus_albus
ENSCVAG00000010887	-	66	50.685	ENSNBRG00000004792	-	59	50.685	Neolamprologus_brichardi
ENSCVAG00000010887	-	55	72.174	ENSNBRG00000016639	-	52	72.174	Neolamprologus_brichardi
ENSCVAG00000010887	-	51	47.619	ENSNBRG00000024179	-	61	47.619	Neolamprologus_brichardi
ENSCVAG00000010887	-	51	50.000	ENSNBRG00000004723	-	83	50.000	Neolamprologus_brichardi
ENSCVAG00000010887	-	51	45.455	ENSNBRG00000019004	-	75	43.373	Neolamprologus_brichardi
ENSCVAG00000010887	-	53	45.455	ENSONIG00000001986	-	85	45.455	Oreochromis_niloticus
ENSCVAG00000010887	-	51	45.283	ENSONIG00000014012	-	84	45.283	Oreochromis_niloticus
ENSCVAG00000010887	-	55	52.381	ENSOMEG00000015179	-	64	52.381	Oryzias_melastigma
ENSCVAG00000010887	-	56	45.263	ENSPKIG00000015951	-	66	45.263	Paramormyrops_kingsleyae
ENSCVAG00000010887	-	51	44.318	ENSPMGG00000020606	-	86	44.318	Periophthalmus_magnuspinnatus
ENSCVAG00000010887	-	87	49.383	ENSPMGG00000008518	-	95	49.383	Periophthalmus_magnuspinnatus
ENSCVAG00000010887	-	52	48.148	ENSPFOG00000018771	-	80	49.383	Poecilia_formosa
ENSCVAG00000010887	-	73	48.235	ENSPFOG00000000667	-	70	48.235	Poecilia_formosa
ENSCVAG00000010887	-	52	51.515	ENSPLAG00000005106	-	65	51.515	Poecilia_latipinna
ENSCVAG00000010887	-	73	48.235	ENSPLAG00000013745	-	82	48.235	Poecilia_latipinna
ENSCVAG00000010887	-	51	48.101	ENSPMEG00000020864	-	76	48.101	Poecilia_mexicana
ENSCVAG00000010887	-	93	48.148	ENSPMEG00000022651	-	82	48.148	Poecilia_mexicana
ENSCVAG00000010887	-	61	51.351	ENSPNYG00000016157	-	54	51.351	Pundamilia_nyererei
ENSCVAG00000010887	-	50	56.863	ENSPNYG00000020737	-	81	56.863	Pundamilia_nyererei
ENSCVAG00000010887	-	67	50.602	ENSPNAG00000011660	-	53	50.602	Pygocentrus_nattereri
ENSCVAG00000010887	-	50	48.750	ENSPNAG00000025882	-	61	48.750	Pygocentrus_nattereri
ENSCVAG00000010887	-	55	53.846	ENSSFOG00015006083	-	58	53.846	Scleropages_formosus
ENSCVAG00000010887	-	73	50.617	ENSSMAG00000013663	-	91	50.617	Scophthalmus_maximus
ENSCVAG00000010887	-	90	54.902	ENSSMAG00000006902	-	65	54.902	Scophthalmus_maximus
ENSCVAG00000010887	-	51	50.000	ENSSMAG00000013828	-	60	50.000	Scophthalmus_maximus
ENSCVAG00000010887	-	90	50.820	ENSSMAG00000006155	-	69	50.820	Scophthalmus_maximus
ENSCVAG00000010887	-	50	49.180	ENSSDUG00000023765	-	65	49.180	Seriola_dumerili
ENSCVAG00000010887	-	51	48.750	ENSSDUG00000015013	-	60	48.750	Seriola_dumerili
ENSCVAG00000010887	-	51	48.750	ENSSLDG00000021278	-	60	48.750	Seriola_lalandi_dorsalis
ENSCVAG00000010887	-	59	94.828	ENSSPAG00000008950	-	57	94.828	Stegastes_partitus
ENSCVAG00000010887	-	52	53.731	ENSSPAG00000007403	-	80	61.905	Stegastes_partitus
ENSCVAG00000010887	-	77	42.683	ENSTRUG00000023491	-	70	42.683	Takifugu_rubripes
ENSCVAG00000010887	-	53	47.778	ENSTNIG00000002344	-	88	47.778	Tetraodon_nigroviridis
ENSCVAG00000010887	-	78	52.000	ENSXCOG00000013306	-	74	52.000	Xiphophorus_couchianus
ENSCVAG00000010887	-	53	46.575	ENSXCOG00000020769	-	76	46.575	Xiphophorus_couchianus
ENSCVAG00000010887	-	94	63.277	ENSXMAG00000022894	-	61	63.277	Xiphophorus_maculatus