EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011006 (Gene tree)
Gene ID: 107095522
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 21731 bases
Position: chrKL653053.1:435931-457661
Accession: 107095522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025857	DEAD	PF00270.29	3.1e-42	1	1
ENSCVAP00000009059	DEAD	PF00270.29	1.3e-25	1	2
ENSCVAP00000009059	DEAD	PF00270.29	1.3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000556	-	5076	XM_015391654	ENSCVAP00000025857	482 (aa)	XP_015247140	UPI0007426F89
ENSCVAT00000000580	-	1302	-	ENSCVAP00000009059	433 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000011006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011006	-	73	40.741	ENSCVAG00000011003	-	57	30.788
ENSCVAG00000011006	-	68	45.098	ENSCVAG00000020927	ddx1	53	45.098
ENSCVAG00000011006	-	77	31.095	ENSCVAG00000001784	-	62	31.095
ENSCVAG00000011006	-	78	37.566	ENSCVAG00000006864	eif4a3	92	37.566
ENSCVAG00000011006	-	77	32.368	ENSCVAG00000010466	ddx49	80	32.368
ENSCVAG00000011006	-	73	32.222	ENSCVAG00000010921	si:dkey-156n14.5	54	32.222
ENSCVAG00000011006	-	83	30.602	ENSCVAG00000008721	zgc:193690	81	35.769
ENSCVAG00000011006	-	80	31.963	ENSCVAG00000015745	ddx23	59	31.963
ENSCVAG00000011006	-	80	33.668	ENSCVAG00000014821	ddx20	52	33.668
ENSCVAG00000011006	-	77	39.247	ENSCVAG00000019209	eif4a1b	92	39.247
ENSCVAG00000011006	-	74	36.559	ENSCVAG00000012986	ddx19	78	36.559
ENSCVAG00000011006	-	82	35.589	ENSCVAG00000007477	DDX39A	93	35.589
ENSCVAG00000011006	-	96	81.342	ENSCVAG00000002540	ddx6	99	81.342
ENSCVAG00000011006	-	72	30.618	ENSCVAG00000018093	ddx5	72	30.618
ENSCVAG00000011006	-	66	31.818	ENSCVAG00000017936	ddx18	51	31.818
ENSCVAG00000011006	-	70	30.556	ENSCVAG00000014462	DDX41	55	30.556
ENSCVAG00000011006	-	77	40.323	ENSCVAG00000003186	eif4a2	90	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011006	-	98	85.804	ENSAPOG00000014829	ddx61	98	85.804	Acanthochromis_polyacanthus
ENSCVAG00000011006	-	78	96.533	ENSAPOG00000023627	-	95	96.533	Acanthochromis_polyacanthus
ENSCVAG00000011006	-	100	85.276	ENSACIG00000018355	-	100	85.276	Amphilophus_citrinellus
ENSCVAG00000011006	-	100	91.820	ENSAOCG00000006269	-	100	92.025	Amphiprion_ocellaris
ENSCVAG00000011006	-	98	86.848	ENSAOCG00000007627	ddx61	98	86.848	Amphiprion_ocellaris
ENSCVAG00000011006	-	100	91.820	ENSAPEG00000021368	-	100	92.025	Amphiprion_percula
ENSCVAG00000011006	-	98	86.848	ENSAPEG00000007293	ddx61	98	86.848	Amphiprion_percula
ENSCVAG00000011006	-	100	91.820	ENSAPEG00000020642	-	100	92.025	Amphiprion_percula
ENSCVAG00000011006	-	96	87.207	ENSATEG00000011302	ddx61	99	86.229	Anabas_testudineus
ENSCVAG00000011006	-	100	90.798	ENSATEG00000005424	-	100	90.798	Anabas_testudineus
ENSCVAG00000011006	-	98	85.685	ENSACLG00000027620	ddx61	99	85.685	Astatotilapia_calliptera
ENSCVAG00000011006	-	100	92.638	ENSACLG00000003260	-	100	92.638	Astatotilapia_calliptera
ENSCVAG00000011006	-	96	86.864	ENSAMXG00000032542	ddx61	99	85.714	Astyanax_mexicanus
ENSCVAG00000011006	-	99	87.780	ENSAMXG00000033980	-	99	87.780	Astyanax_mexicanus
ENSCVAG00000011006	-	100	91.429	ENSCSEG00000009893	-	100	91.429	Cynoglossus_semilaevis
ENSCVAG00000011006	-	97	85.865	ENSDARG00000018425	ddx61	98	85.865	Danio_rerio
ENSCVAG00000011006	-	99	88.344	ENSELUG00000022538	-	99	88.344	Esox_lucius
ENSCVAG00000011006	-	98	87.759	ENSELUG00000020545	ddx61	99	87.759	Esox_lucius
ENSCVAG00000011006	-	100	96.473	ENSFHEG00000015487	-	100	96.473	Fundulus_heteroclitus
ENSCVAG00000011006	-	66	86.239	ENSGMOG00000003561	-	100	86.850	Gadus_morhua
ENSCVAG00000011006	-	96	87.049	ENSGMOG00000013762	ddx61	99	86.526	Gadus_morhua
ENSCVAG00000011006	-	100	95.445	ENSGAFG00000015865	-	100	95.445	Gambusia_affinis
ENSCVAG00000011006	-	97	86.458	ENSGACG00000003401	ddx61	99	86.458	Gasterosteus_aculeatus
ENSCVAG00000011006	-	99	91.718	ENSGACG00000002413	-	100	91.718	Gasterosteus_aculeatus
ENSCVAG00000011006	-	100	92.638	ENSHBUG00000017033	-	100	92.638	Haplochromis_burtoni
ENSCVAG00000011006	-	98	85.890	ENSHBUG00000017832	ddx61	99	85.890	Haplochromis_burtoni
ENSCVAG00000011006	-	100	87.730	ENSHCOG00000012238	-	100	87.730	Hippocampus_comes
ENSCVAG00000011006	-	96	85.161	ENSHCOG00000008184	ddx61	97	85.161	Hippocampus_comes
ENSCVAG00000011006	-	96	85.097	ENSIPUG00000012823	DDX6	99	83.824	Ictalurus_punctatus
ENSCVAG00000011006	-	96	87.500	ENSIPUG00000008367	-	100	86.128	Ictalurus_punctatus
ENSCVAG00000011006	-	100	92.843	ENSKMAG00000007213	-	100	92.843	Kryptolebias_marmoratus
ENSCVAG00000011006	-	100	89.718	ENSLBEG00000016890	-	100	90.157	Labrus_bergylta
ENSCVAG00000011006	-	97	86.737	ENSLBEG00000001740	ddx61	98	86.737	Labrus_bergylta
ENSCVAG00000011006	-	97	84.232	ENSLACG00000015214	ddx61	100	84.232	Latimeria_chalumnae
ENSCVAG00000011006	-	97	50.116	ENSLOCG00000004352	ddx61	97	50.000	Lepisosteus_oculatus
ENSCVAG00000011006	-	96	87.975	ENSMAMG00000005321	ddx61	97	87.975	Mastacembelus_armatus
ENSCVAG00000011006	-	100	91.837	ENSMAMG00000005559	-	100	91.837	Mastacembelus_armatus
ENSCVAG00000011006	-	98	85.890	ENSMZEG00005003556	ddx61	99	85.890	Maylandia_zebra
ENSCVAG00000011006	-	100	92.638	ENSMZEG00005026268	-	100	92.638	Maylandia_zebra
ENSCVAG00000011006	-	100	91.364	ENSMMOG00000013694	-	100	91.364	Mola_mola
ENSCVAG00000011006	-	73	76.204	ENSMMOG00000008825	-	98	71.307	Mola_mola
ENSCVAG00000011006	-	96	86.780	ENSMMOG00000007415	ddx61	97	86.780	Mola_mola
ENSCVAG00000011006	-	97	76.042	ENSMALG00000013776	ddx61	96	76.042	Monopterus_albus
ENSCVAG00000011006	-	100	90.184	ENSMALG00000013817	-	100	90.184	Monopterus_albus
ENSCVAG00000011006	-	98	79.381	ENSNBRG00000015800	ddx61	99	79.381	Neolamprologus_brichardi
ENSCVAG00000011006	-	100	86.094	ENSNBRG00000015075	-	100	86.094	Neolamprologus_brichardi
ENSCVAG00000011006	-	100	92.843	ENSONIG00000013748	-	100	92.843	Oreochromis_niloticus
ENSCVAG00000011006	-	98	86.186	ENSONIG00000011418	ddx61	99	86.186	Oreochromis_niloticus
ENSCVAG00000011006	-	100	90.000	ENSORLG00000009178	-	100	90.000	Oryzias_latipes
ENSCVAG00000011006	-	100	90.249	ENSORLG00020015515	-	100	90.249	Oryzias_latipes_hni
ENSCVAG00000011006	-	100	90.023	ENSORLG00015006764	-	100	90.023	Oryzias_latipes_hsok
ENSCVAG00000011006	-	96	91.962	ENSOMEG00000022326	-	99	91.962	Oryzias_melastigma
ENSCVAG00000011006	-	96	89.076	ENSPKIG00000024264	ddx61	98	88.773	Paramormyrops_kingsleyae
ENSCVAG00000011006	-	100	82.377	ENSPMGG00000013355	-	100	82.377	Periophthalmus_magnuspinnatus
ENSCVAG00000011006	-	100	96.266	ENSPFOG00000005750	-	100	96.266	Poecilia_formosa
ENSCVAG00000011006	-	100	96.266	ENSPLAG00000000403	-	100	96.266	Poecilia_latipinna
ENSCVAG00000011006	-	100	96.273	ENSPMEG00000023737	-	100	96.273	Poecilia_mexicana
ENSCVAG00000011006	-	100	92.638	ENSPNYG00000003986	-	100	92.638	Pundamilia_nyererei
ENSCVAG00000011006	-	98	79.848	ENSPNYG00000015045	ddx61	99	79.848	Pundamilia_nyererei
ENSCVAG00000011006	-	99	87.780	ENSPNAG00000008742	-	100	87.780	Pygocentrus_nattereri
ENSCVAG00000011006	-	97	85.921	ENSPNAG00000024072	ddx61	99	85.921	Pygocentrus_nattereri
ENSCVAG00000011006	-	96	88.397	ENSSFOG00015021404	ddx61	99	86.735	Scleropages_formosus
ENSCVAG00000011006	-	100	90.612	ENSSMAG00000001793	-	100	90.612	Scophthalmus_maximus
ENSCVAG00000011006	-	96	87.207	ENSSMAG00000006591	ddx61	97	86.681	Scophthalmus_maximus
ENSCVAG00000011006	-	96	88.675	ENSSDUG00000009713	ddx61	97	88.136	Seriola_dumerili
ENSCVAG00000011006	-	100	92.041	ENSSDUG00000007530	-	100	92.041	Seriola_dumerili
ENSCVAG00000011006	-	96	88.486	ENSSLDG00000000132	ddx61	97	87.949	Seriola_lalandi_dorsalis
ENSCVAG00000011006	-	100	92.041	ENSSLDG00000007608	-	100	92.041	Seriola_lalandi_dorsalis
ENSCVAG00000011006	-	96	88.248	ENSSPAG00000001578	ddx61	98	87.002	Stegastes_partitus
ENSCVAG00000011006	-	100	92.638	ENSSPAG00000013878	-	100	92.638	Stegastes_partitus
ENSCVAG00000011006	-	99	88.730	ENSTRUG00000012432	-	99	88.730	Takifugu_rubripes
ENSCVAG00000011006	-	98	89.375	ENSTNIG00000003560	-	100	89.375	Tetraodon_nigroviridis
ENSCVAG00000011006	-	100	95.392	ENSXCOG00000001406	-	100	95.392	Xiphophorus_couchianus
ENSCVAG00000011006	-	100	95.859	ENSXMAG00000016090	-	100	95.859	Xiphophorus_maculatus