EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000011011 (Gene tree)
Gene ID: 107092151
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 25823 bases
Position: chrKL652869.1:43444-69266
Accession: 107092151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009107	Urb2	PF10441.9	4.3e-16	1	1
ENSCVAP00000025874	Urb2	PF10441.9	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000501	-	5909	XM_015386468	ENSCVAP00000009107	1603 (aa)	XP_015241954	UPI00074276A1
ENSCVAT00000000517	-	5914	-	ENSCVAP00000025874	1603 (aa)	-	UPI00074276A1

Gene Model

Click here to download ENSCVAG00000011011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011011	urb2	99	34.211	ENSG00000135763	URB2	96	59.756	Homo_sapiens
ENSCVAG00000011011	urb2	91	62.254	ENSAPOG00000000608	urb2	100	61.861	Acanthochromis_polyacanthus
ENSCVAG00000011011	urb2	100	34.476	ENSAMEG00000009206	URB2	100	34.375	Ailuropoda_melanoleuca
ENSCVAG00000011011	urb2	100	64.081	ENSAOCG00000019961	urb2	100	63.842	Amphiprion_ocellaris
ENSCVAG00000011011	urb2	100	63.962	ENSAPEG00000005263	urb2	100	63.723	Amphiprion_percula
ENSCVAG00000011011	urb2	100	61.088	ENSATEG00000020930	urb2	100	60.695	Anabas_testudineus
ENSCVAG00000011011	urb2	97	34.944	ENSAPLG00000002998	URB2	99	35.210	Anas_platyrhynchos
ENSCVAG00000011011	urb2	99	36.170	ENSACAG00000001285	URB2	99	36.170	Anolis_carolinensis
ENSCVAG00000011011	urb2	99	34.777	ENSANAG00000033963	URB2	99	34.716	Aotus_nancymaae
ENSCVAG00000011011	urb2	91	60.237	ENSACLG00000009254	urb2	100	60.237	Astatotilapia_calliptera
ENSCVAG00000011011	urb2	99	40.590	ENSAMXG00000003474	urb2	99	40.590	Astyanax_mexicanus
ENSCVAG00000011011	urb2	100	34.409	ENSBTAG00000010180	URB2	100	34.265	Bos_taurus
ENSCVAG00000011011	urb2	96	55.195	ENSCJAG00000010968	URB2	99	55.195	Callithrix_jacchus
ENSCVAG00000011011	urb2	99	34.275	ENSCAFG00000012118	URB2	99	34.294	Canis_familiaris
ENSCVAG00000011011	urb2	93	32.980	ENSCAFG00020027217	URB2	98	33.003	Canis_lupus_dingo
ENSCVAG00000011011	urb2	100	34.308	ENSCHIG00000014513	URB2	100	34.126	Capra_hircus
ENSCVAG00000011011	urb2	100	34.108	ENSTSYG00000006924	URB2	100	34.270	Carlito_syrichta
ENSCVAG00000011011	urb2	61	41.808	ENSCPOG00000020777	-	99	41.808	Cavia_porcellus
ENSCVAG00000011011	urb2	99	34.695	ENSCCAG00000023932	URB2	99	34.493	Cebus_capucinus
ENSCVAG00000011011	urb2	99	34.615	ENSCATG00000043366	URB2	99	34.655	Cercocebus_atys
ENSCVAG00000011011	urb2	99	34.831	ENSCLAG00000006268	URB2	99	35.280	Chinchilla_lanigera
ENSCVAG00000011011	urb2	99	34.254	ENSCSAG00000010599	URB2	99	34.294	Chlorocebus_sabaeus
ENSCVAG00000011011	urb2	69	41.447	ENSCHOG00000010163	URB2	70	41.447	Choloepus_hoffmanni
ENSCVAG00000011011	urb2	99	37.910	ENSCPBG00000006191	URB2	99	37.789	Chrysemys_picta_bellii
ENSCVAG00000011011	urb2	99	34.396	ENSCANG00000023711	URB2	99	34.436	Colobus_angolensis_palliatus
ENSCVAG00000011011	urb2	99	34.401	ENSCGRG00001009591	Urb2	99	34.220	Cricetulus_griseus_chok1gshd
ENSCVAG00000011011	urb2	99	34.401	ENSCGRG00000011259	Urb2	99	34.220	Cricetulus_griseus_crigri
ENSCVAG00000011011	urb2	100	52.453	ENSCSEG00000000299	urb2	100	52.392	Cynoglossus_semilaevis
ENSCVAG00000011011	urb2	100	42.495	ENSDARG00000003217	urb2	100	60.000	Danio_rerio
ENSCVAG00000011011	urb2	97	32.238	ENSDNOG00000043064	URB2	99	32.552	Dasypus_novemcinctus
ENSCVAG00000011011	urb2	99	34.411	ENSDORG00000014975	Urb2	99	34.350	Dipodomys_ordii
ENSCVAG00000011011	urb2	95	38.028	ENSETEG00000002869	URB2	95	38.028	Echinops_telfairi
ENSCVAG00000011011	urb2	100	35.172	ENSEASG00005012060	URB2	100	35.172	Equus_asinus_asinus
ENSCVAG00000011011	urb2	93	58.621	ENSECAG00000012338	URB2	100	58.621	Equus_caballus
ENSCVAG00000011011	urb2	93	53.147	ENSEEUG00000002669	URB2	92	53.147	Erinaceus_europaeus
ENSCVAG00000011011	urb2	100	47.847	ENSELUG00000014647	urb2	100	47.818	Esox_lucius
ENSCVAG00000011011	urb2	99	34.841	ENSFCAG00000007662	URB2	99	34.881	Felis_catus
ENSCVAG00000011011	urb2	99	36.253	ENSFALG00000003385	URB2	99	35.922	Ficedula_albicollis
ENSCVAG00000011011	urb2	99	35.377	ENSFDAG00000021079	URB2	99	35.254	Fukomys_damarensis
ENSCVAG00000011011	urb2	100	77.854	ENSFHEG00000010357	urb2	100	77.854	Fundulus_heteroclitus
ENSCVAG00000011011	urb2	99	51.386	ENSGMOG00000012459	urb2	100	51.879	Gadus_morhua
ENSCVAG00000011011	urb2	99	36.996	ENSGALG00000011101	URB2	99	36.602	Gallus_gallus
ENSCVAG00000011011	urb2	100	59.778	ENSGACG00000016179	urb2	100	59.655	Gasterosteus_aculeatus
ENSCVAG00000011011	urb2	99	38.130	ENSGAGG00000021879	URB2	99	38.009	Gopherus_agassizii
ENSCVAG00000011011	urb2	99	34.049	ENSGGOG00000025643	URB2	99	34.090	Gorilla_gorilla
ENSCVAG00000011011	urb2	100	61.285	ENSHBUG00000018469	urb2	100	61.285	Haplochromis_burtoni
ENSCVAG00000011011	urb2	97	34.357	ENSHGLG00000016561	URB2	99	34.440	Heterocephalus_glaber_female
ENSCVAG00000011011	urb2	93	36.462	ENSHGLG00100001838	URB2	99	34.455	Heterocephalus_glaber_male
ENSCVAG00000011011	urb2	100	41.394	ENSIPUG00000020315	urb2	100	41.394	Ictalurus_punctatus
ENSCVAG00000011011	urb2	99	34.862	ENSSTOG00000025323	URB2	99	34.902	Ictidomys_tridecemlineatus
ENSCVAG00000011011	urb2	56	36.802	ENSJJAG00000011998	Urb2	99	34.128	Jaculus_jaculus
ENSCVAG00000011011	urb2	100	65.862	ENSKMAG00000020129	urb2	100	65.621	Kryptolebias_marmoratus
ENSCVAG00000011011	urb2	99	37.469	ENSLACG00000002038	URB2	99	37.714	Latimeria_chalumnae
ENSCVAG00000011011	urb2	99	42.298	ENSLOCG00000015462	urb2	99	42.359	Lepisosteus_oculatus
ENSCVAG00000011011	urb2	99	33.945	ENSLAFG00000012484	URB2	100	33.945	Loxodonta_africana
ENSCVAG00000011011	urb2	99	34.453	ENSMFAG00000039905	URB2	99	34.493	Macaca_fascicularis
ENSCVAG00000011011	urb2	99	34.453	ENSMMUG00000009509	URB2	99	34.493	Macaca_mulatta
ENSCVAG00000011011	urb2	99	34.392	ENSMNEG00000038762	URB2	99	34.432	Macaca_nemestrina
ENSCVAG00000011011	urb2	99	34.615	ENSMLEG00000043252	URB2	99	34.655	Mandrillus_leucophaeus
ENSCVAG00000011011	urb2	100	58.482	ENSMAMG00000020365	urb2	100	58.348	Mastacembelus_armatus
ENSCVAG00000011011	urb2	100	61.224	ENSMZEG00005011027	urb2	100	61.224	Maylandia_zebra
ENSCVAG00000011011	urb2	95	34.777	ENSMGAG00000012073	URB2	99	34.258	Meleagris_gallopavo
ENSCVAG00000011011	urb2	96	56.579	ENSMAUG00000017980	Urb2	99	56.579	Mesocricetus_auratus
ENSCVAG00000011011	urb2	100	34.476	ENSMICG00000033302	URB2	100	34.476	Microcebus_murinus
ENSCVAG00000011011	urb2	99	34.327	ENSMOCG00000020369	Urb2	99	34.426	Microtus_ochrogaster
ENSCVAG00000011011	urb2	100	61.758	ENSMALG00000006529	urb2	100	61.639	Monopterus_albus
ENSCVAG00000011011	urb2	99	34.065	ENSMUSG00000031976	Urb2	99	34.018	Mus_musculus
ENSCVAG00000011011	urb2	99	35.046	ENSMPUG00000012438	URB2	99	35.046	Mustela_putorius_furo
ENSCVAG00000011011	urb2	99	34.287	ENSNGAG00000016524	Urb2	99	34.388	Nannospalax_galili
ENSCVAG00000011011	urb2	99	34.113	ENSNLEG00000014450	URB2	99	34.154	Nomascus_leucogenys
ENSCVAG00000011011	urb2	92	41.892	ENSMEUG00000016434	URB2	94	41.892	Notamacropus_eugenii
ENSCVAG00000011011	urb2	87	80.952	ENSOPRG00000009906	URB2	86	80.952	Ochotona_princeps
ENSCVAG00000011011	urb2	99	34.700	ENSODEG00000005593	URB2	99	34.884	Octodon_degus
ENSCVAG00000011011	urb2	100	60.829	ENSONIG00000017078	urb2	100	60.829	Oreochromis_niloticus
ENSCVAG00000011011	urb2	99	33.684	ENSOANG00000013732	URB2	99	33.849	Ornithorhynchus_anatinus
ENSCVAG00000011011	urb2	100	35.409	ENSOCUG00000010700	URB2	100	35.509	Oryctolagus_cuniculus
ENSCVAG00000011011	urb2	100	61.684	ENSORLG00000010915	urb2	100	61.318	Oryzias_latipes
ENSCVAG00000011011	urb2	100	61.829	ENSORLG00020003361	urb2	100	61.829	Oryzias_latipes_hni
ENSCVAG00000011011	urb2	100	61.365	ENSORLG00015001534	urb2	100	61.060	Oryzias_latipes_hsok
ENSCVAG00000011011	urb2	100	62.157	ENSOMEG00000010076	urb2	100	62.302	Oryzias_melastigma
ENSCVAG00000011011	urb2	100	33.738	ENSOGAG00000003021	URB2	100	33.899	Otolemur_garnettii
ENSCVAG00000011011	urb2	100	33.887	ENSOARG00000003102	URB2	100	33.764	Ovis_aries
ENSCVAG00000011011	urb2	99	34.128	ENSPPAG00000040629	URB2	99	34.169	Pan_paniscus
ENSCVAG00000011011	urb2	99	34.812	ENSPPRG00000012767	URB2	99	34.851	Panthera_pardus
ENSCVAG00000011011	urb2	95	55.385	ENSPTIG00000012577	URB2	99	55.385	Panthera_tigris_altaica
ENSCVAG00000011011	urb2	99	34.128	ENSPTRG00000002092	URB2	99	34.169	Pan_troglodytes
ENSCVAG00000011011	urb2	99	33.822	ENSPANG00000002245	URB2	99	33.862	Papio_anubis
ENSCVAG00000011011	urb2	99	42.038	ENSPKIG00000005787	urb2	99	41.987	Paramormyrops_kingsleyae
ENSCVAG00000011011	urb2	99	37.165	ENSPSIG00000002690	URB2	99	36.983	Pelodiscus_sinensis
ENSCVAG00000011011	urb2	96	32.718	ENSPEMG00000019551	Urb2	100	32.871	Peromyscus_maniculatus_bairdii
ENSCVAG00000011011	urb2	99	34.951	ENSPCIG00000030071	URB2	99	35.110	Phascolarctos_cinereus
ENSCVAG00000011011	urb2	100	75.435	ENSPFOG00000014330	urb2	100	75.062	Poecilia_formosa
ENSCVAG00000011011	urb2	100	75.311	ENSPLAG00000014654	urb2	100	74.938	Poecilia_latipinna
ENSCVAG00000011011	urb2	100	75.684	ENSPMEG00000012356	urb2	100	75.310	Poecilia_mexicana
ENSCVAG00000011011	urb2	100	75.871	ENSPREG00000010268	urb2	100	75.435	Poecilia_reticulata
ENSCVAG00000011011	urb2	100	33.822	ENSPPYG00000000123	URB2	100	33.862	Pongo_abelii
ENSCVAG00000011011	urb2	100	34.854	ENSPCOG00000023537	URB2	100	35.380	Propithecus_coquereli
ENSCVAG00000011011	urb2	99	32.326	ENSPVAG00000002108	URB2	99	32.366	Pteropus_vampyrus
ENSCVAG00000011011	urb2	91	60.369	ENSPNYG00000016840	urb2	100	60.369	Pundamilia_nyererei
ENSCVAG00000011011	urb2	99	42.362	ENSPNAG00000013684	urb2	99	42.284	Pygocentrus_nattereri
ENSCVAG00000011011	urb2	99	33.856	ENSRNOG00000026853	Urb2	97	33.836	Rattus_norvegicus
ENSCVAG00000011011	urb2	99	34.735	ENSRBIG00000037937	URB2	99	34.775	Rhinopithecus_bieti
ENSCVAG00000011011	urb2	99	34.674	ENSRROG00000039854	URB2	99	34.714	Rhinopithecus_roxellana
ENSCVAG00000011011	urb2	99	34.613	ENSSBOG00000023055	URB2	99	34.491	Saimiri_boliviensis_boliviensis
ENSCVAG00000011011	urb2	99	34.294	ENSSHAG00000014735	URB2	99	34.419	Sarcophilus_harrisii
ENSCVAG00000011011	urb2	97	42.254	ENSSFOG00015015432	urb2	98	42.211	Scleropages_formosus
ENSCVAG00000011011	urb2	91	59.845	ENSSMAG00000004984	urb2	100	59.417	Scophthalmus_maximus
ENSCVAG00000011011	urb2	100	62.156	ENSSDUG00000000902	urb2	100	62.111	Seriola_dumerili
ENSCVAG00000011011	urb2	99	36.501	ENSSPUG00000018549	URB2	99	37.312	Sphenodon_punctatus
ENSCVAG00000011011	urb2	100	63.761	ENSSPAG00000013632	urb2	100	63.463	Stegastes_partitus
ENSCVAG00000011011	urb2	100	34.820	ENSSSCG00000010186	URB2	100	34.979	Sus_scrofa
ENSCVAG00000011011	urb2	99	35.929	ENSTGUG00000009990	URB2	99	35.929	Taeniopygia_guttata
ENSCVAG00000011011	urb2	100	54.052	ENSTRUG00000008173	urb2	100	53.874	Takifugu_rubripes
ENSCVAG00000011011	urb2	93	59.351	ENSTNIG00000017689	urb2	96	59.351	Tetraodon_nigroviridis
ENSCVAG00000011011	urb2	95	80.952	ENSTTRG00000014864	URB2	95	80.952	Tursiops_truncatus
ENSCVAG00000011011	urb2	100	34.457	ENSUAMG00000015022	URB2	100	34.436	Ursus_americanus
ENSCVAG00000011011	urb2	100	34.641	ENSUMAG00000004728	URB2	100	34.620	Ursus_maritimus
ENSCVAG00000011011	urb2	52	57.971	ENSVPAG00000001750	-	51	57.971	Vicugna_pacos
ENSCVAG00000011011	urb2	99	34.356	ENSVVUG00000006747	URB2	99	34.375	Vulpes_vulpes
ENSCVAG00000011011	urb2	99	32.705	ENSXETG00000023331	urb2	99	32.644	Xenopus_tropicalis
ENSCVAG00000011011	urb2	100	76.182	ENSXMAG00000015059	urb2	100	75.871	Xiphophorus_maculatus