EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011047 (Gene tree)
Gene ID: 107082252
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1914 bases
Position: chrKL652502.1:1568166-1570079
Accession: 107082252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000025900	RRM_1	PF00076.22	2.8e-33	1	3
ENSCVAP00000025900	RRM_1	PF00076.22	2.8e-33	2	3
ENSCVAP00000025900	RRM_1	PF00076.22	2.8e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000000444	-	1914	XM_015370838	ENSCVAP00000025900	637 (aa)	XP_015226324	UPI0007424D6E

Gene Model

Click here to download ENSCVAG00000011047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011047	rbm12b	97	36.111	ENSCVAG00000009259	-	99	36.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011047	rbm12b	86	46.753	ENSG00000183808	RBM12B	98	75.000	Homo_sapiens
ENSCVAG00000011047	rbm12b	72	30.252	ENSAPOG00000008836	zgc:153215	95	30.252	Acanthochromis_polyacanthus
ENSCVAG00000011047	rbm12b	100	59.688	ENSAPOG00000013963	rbm12b	100	59.688	Acanthochromis_polyacanthus
ENSCVAG00000011047	rbm12b	86	45.455	ENSAMEG00000007134	RBM12B	66	45.455	Ailuropoda_melanoleuca
ENSCVAG00000011047	rbm12b	93	58.140	ENSACIG00000014943	rbm12b	97	57.807	Amphilophus_citrinellus
ENSCVAG00000011047	rbm12b	100	60.781	ENSAOCG00000024270	rbm12b	100	60.781	Amphiprion_ocellaris
ENSCVAG00000011047	rbm12b	98	40.241	ENSAPEG00000022079	rbm12b	99	58.632	Amphiprion_percula
ENSCVAG00000011047	rbm12b	100	58.870	ENSATEG00000004578	rbm12b	97	58.556	Anabas_testudineus
ENSCVAG00000011047	rbm12b	74	50.000	ENSATEG00000001886	zgc:153215	83	39.394	Anabas_testudineus
ENSCVAG00000011047	rbm12b	100	37.411	ENSAPLG00000002020	RBM12B	100	38.202	Anas_platyrhynchos
ENSCVAG00000011047	rbm12b	87	44.156	ENSACAG00000003463	RBM12B	57	44.156	Anolis_carolinensis
ENSCVAG00000011047	rbm12b	86	46.753	ENSANAG00000034015	RBM12B	67	46.753	Aotus_nancymaae
ENSCVAG00000011047	rbm12b	100	52.174	ENSACLG00000005578	rbm12b	100	52.174	Astatotilapia_calliptera
ENSCVAG00000011047	rbm12b	100	58.998	ENSACLG00000005575	rbm12b	98	58.998	Astatotilapia_calliptera
ENSCVAG00000011047	rbm12b	100	44.753	ENSAMXG00000041973	rbm12b	100	42.986	Astyanax_mexicanus
ENSCVAG00000011047	rbm12b	86	48.052	ENSBTAG00000013408	RBM12B	65	48.052	Bos_taurus
ENSCVAG00000011047	rbm12b	86	45.455	ENSCAFG00000009109	RBM12B	56	45.455	Canis_familiaris
ENSCVAG00000011047	rbm12b	86	45.455	ENSCAFG00020012203	RBM12B	64	45.455	Canis_lupus_dingo
ENSCVAG00000011047	rbm12b	74	41.344	ENSCHIG00000006790	RBM12B	67	41.344	Capra_hircus
ENSCVAG00000011047	rbm12b	86	46.753	ENSTSYG00000012515	RBM12B	57	46.753	Carlito_syrichta
ENSCVAG00000011047	rbm12b	86	49.351	ENSCAPG00000003543	RBM12B	59	49.351	Cavia_aperea
ENSCVAG00000011047	rbm12b	86	49.351	ENSCPOG00000007815	RBM12B	59	49.351	Cavia_porcellus
ENSCVAG00000011047	rbm12b	86	46.753	ENSCATG00000030769	RBM12B	65	46.753	Cercocebus_atys
ENSCVAG00000011047	rbm12b	86	49.351	ENSCLAG00000017617	RBM12B	59	49.351	Chinchilla_lanigera
ENSCVAG00000011047	rbm12b	86	46.753	ENSCSAG00000018559	RBM12B	56	46.753	Chlorocebus_sabaeus
ENSCVAG00000011047	rbm12b	84	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSCVAG00000011047	rbm12b	100	38.034	ENSCPBG00000003061	RBM12B	100	37.500	Chrysemys_picta_bellii
ENSCVAG00000011047	rbm12b	86	46.753	ENSCANG00000030379	RBM12B	65	46.753	Colobus_angolensis_palliatus
ENSCVAG00000011047	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSCVAG00000011047	rbm12b	100	52.879	ENSCSEG00000004610	rbm12b	97	52.879	Cynoglossus_semilaevis
ENSCVAG00000011047	rbm12b	89	60.870	ENSDARG00000079717	rbm12b	83	63.529	Danio_rerio
ENSCVAG00000011047	rbm12b	66	51.136	ENSDARG00000055889	zgc:153215	80	51.136	Danio_rerio
ENSCVAG00000011047	rbm12b	88	45.161	ENSDNOG00000041608	RBM12B	56	48.052	Dasypus_novemcinctus
ENSCVAG00000011047	rbm12b	86	48.052	ENSDORG00000024034	-	60	48.052	Dipodomys_ordii
ENSCVAG00000011047	rbm12b	79	39.098	ENSETEG00000013005	-	70	38.783	Echinops_telfairi
ENSCVAG00000011047	rbm12b	86	48.052	ENSEASG00005016297	RBM12B	64	48.052	Equus_asinus_asinus
ENSCVAG00000011047	rbm12b	86	48.052	ENSECAG00000017870	RBM12B	57	48.052	Equus_caballus
ENSCVAG00000011047	rbm12b	86	48.052	ENSFCAG00000029274	RBM12B	65	48.052	Felis_catus
ENSCVAG00000011047	rbm12b	100	35.933	ENSFALG00000014893	RBM12B	100	36.606	Ficedula_albicollis
ENSCVAG00000011047	rbm12b	86	49.351	ENSFDAG00000005576	RBM12B	58	49.351	Fukomys_damarensis
ENSCVAG00000011047	rbm12b	100	72.741	ENSFHEG00000016425	rbm12b	100	72.741	Fundulus_heteroclitus
ENSCVAG00000011047	rbm12b	99	51.708	ENSGMOG00000013467	rbm12b	100	51.719	Gadus_morhua
ENSCVAG00000011047	rbm12b	100	37.027	ENSGALG00000035129	RBM12B	100	37.183	Gallus_gallus
ENSCVAG00000011047	rbm12b	73	31.102	ENSGAFG00000007845	zgc:153215	98	30.315	Gambusia_affinis
ENSCVAG00000011047	rbm12b	100	75.196	ENSGAFG00000007224	rbm12b	100	75.196	Gambusia_affinis
ENSCVAG00000011047	rbm12b	100	56.192	ENSGACG00000008682	rbm12b	99	56.192	Gasterosteus_aculeatus
ENSCVAG00000011047	rbm12b	100	37.464	ENSGAGG00000009774	RBM12B	100	36.932	Gopherus_agassizii
ENSCVAG00000011047	rbm12b	86	45.455	ENSGGOG00000011909	RBM12B	64	45.455	Gorilla_gorilla
ENSCVAG00000011047	rbm12b	100	57.143	ENSHBUG00000016227	rbm12b	100	57.143	Haplochromis_burtoni
ENSCVAG00000011047	rbm12b	86	49.351	ENSHGLG00000009063	RBM12B	58	49.351	Heterocephalus_glaber_female
ENSCVAG00000011047	rbm12b	86	49.351	ENSHGLG00100021324	RBM12B	58	49.351	Heterocephalus_glaber_male
ENSCVAG00000011047	rbm12b	100	51.097	ENSHCOG00000014952	rbm12b	100	50.935	Hippocampus_comes
ENSCVAG00000011047	rbm12b	100	43.807	ENSIPUG00000001167	RBM12B	97	43.353	Ictalurus_punctatus
ENSCVAG00000011047	rbm12b	74	30.483	ENSIPUG00000019731	zgc:153215	76	55.128	Ictalurus_punctatus
ENSCVAG00000011047	rbm12b	86	49.351	ENSSTOG00000027445	RBM12B	67	49.351	Ictidomys_tridecemlineatus
ENSCVAG00000011047	rbm12b	99	48.052	ENSJJAG00000004165	-	69	48.052	Jaculus_jaculus
ENSCVAG00000011047	rbm12b	100	58.594	ENSKMAG00000013715	rbm12b	100	58.594	Kryptolebias_marmoratus
ENSCVAG00000011047	rbm12b	100	59.062	ENSKMAG00000013704	rbm12b	97	59.062	Kryptolebias_marmoratus
ENSCVAG00000011047	rbm12b	74	30.417	ENSKMAG00000004958	zgc:153215	99	30.208	Kryptolebias_marmoratus
ENSCVAG00000011047	rbm12b	74	31.474	ENSLBEG00000002597	zgc:153215	99	31.373	Labrus_bergylta
ENSCVAG00000011047	rbm12b	100	38.109	ENSLACG00000007177	RBM12B	100	38.252	Latimeria_chalumnae
ENSCVAG00000011047	rbm12b	100	45.414	ENSLOCG00000018344	rbm12b	100	44.962	Lepisosteus_oculatus
ENSCVAG00000011047	rbm12b	86	45.455	ENSLAFG00000029949	RBM12B	66	45.455	Loxodonta_africana
ENSCVAG00000011047	rbm12b	86	46.753	ENSMFAG00000045430	RBM12B	65	46.753	Macaca_fascicularis
ENSCVAG00000011047	rbm12b	86	46.753	ENSMMUG00000005558	RBM12B	64	46.753	Macaca_mulatta
ENSCVAG00000011047	rbm12b	86	46.753	ENSMNEG00000041292	RBM12B	65	46.753	Macaca_nemestrina
ENSCVAG00000011047	rbm12b	86	46.753	ENSMLEG00000037288	RBM12B	63	46.753	Mandrillus_leucophaeus
ENSCVAG00000011047	rbm12b	74	37.500	ENSMAMG00000012038	zgc:153215	92	37.500	Mastacembelus_armatus
ENSCVAG00000011047	rbm12b	100	59.969	ENSMAMG00000011998	rbm12b	100	60.031	Mastacembelus_armatus
ENSCVAG00000011047	rbm12b	100	58.842	ENSMZEG00005015005	rbm12b	100	58.842	Maylandia_zebra
ENSCVAG00000011047	rbm12b	100	56.964	ENSMZEG00005014845	rbm12b	99	56.761	Maylandia_zebra
ENSCVAG00000011047	rbm12b	75	39.238	ENSMGAG00000011985	RBM12B	99	39.579	Meleagris_gallopavo
ENSCVAG00000011047	rbm12b	86	49.351	ENSMAUG00000021752	-	67	49.351	Mesocricetus_auratus
ENSCVAG00000011047	rbm12b	86	48.052	ENSMICG00000036969	RBM12B	66	48.052	Microcebus_murinus
ENSCVAG00000011047	rbm12b	86	48.052	ENSMOCG00000005603	-	67	48.052	Microtus_ochrogaster
ENSCVAG00000011047	rbm12b	99	55.730	ENSMMOG00000002404	rbm12b	94	55.416	Mola_mola
ENSCVAG00000011047	rbm12b	86	45.455	ENSMODG00000007436	RBM12B	75	45.455	Monodelphis_domestica
ENSCVAG00000011047	rbm12b	100	56.502	ENSMALG00000012059	rbm12b	100	56.347	Monopterus_albus
ENSCVAG00000011047	rbm12b	74	31.667	ENSMALG00000001222	zgc:153215	98	31.458	Monopterus_albus
ENSCVAG00000011047	rbm12b	86	48.000	ENSMUSG00000052137	Rbm12b2	67	48.000	Mus_musculus
ENSCVAG00000011047	rbm12b	86	49.333	ENSMUSG00000046667	Rbm12b1	67	49.333	Mus_musculus
ENSCVAG00000011047	rbm12b	86	48.000	MGP_SPRETEiJ_G0026766	-	67	48.000	Mus_spretus
ENSCVAG00000011047	rbm12b	86	48.000	MGP_SPRETEiJ_G0026765	-	61	48.000	Mus_spretus
ENSCVAG00000011047	rbm12b	86	48.052	ENSMPUG00000018637	RBM12B	56	48.052	Mustela_putorius_furo
ENSCVAG00000011047	rbm12b	91	46.753	ENSMLUG00000002359	RBM12B	63	46.753	Myotis_lucifugus
ENSCVAG00000011047	rbm12b	86	45.455	ENSNGAG00000002801	-	61	45.455	Nannospalax_galili
ENSCVAG00000011047	rbm12b	100	59.624	ENSNBRG00000015057	rbm12b	100	59.624	Neolamprologus_brichardi
ENSCVAG00000011047	rbm12b	86	46.753	ENSNLEG00000032050	RBM12B	63	46.753	Nomascus_leucogenys
ENSCVAG00000011047	rbm12b	97	49.351	ENSODEG00000019204	RBM12B	66	49.351	Octodon_degus
ENSCVAG00000011047	rbm12b	100	60.250	ENSONIG00000020612	rbm12b	100	60.250	Oreochromis_niloticus
ENSCVAG00000011047	rbm12b	100	36.782	ENSOANG00000015735	-	97	37.016	Ornithorhynchus_anatinus
ENSCVAG00000011047	rbm12b	86	48.052	ENSOCUG00000010353	RBM12B	64	48.052	Oryctolagus_cuniculus
ENSCVAG00000011047	rbm12b	100	58.814	ENSORLG00000008228	rbm12b	97	58.814	Oryzias_latipes
ENSCVAG00000011047	rbm12b	100	59.126	ENSORLG00020013619	rbm12b	97	59.126	Oryzias_latipes_hni
ENSCVAG00000011047	rbm12b	100	59.126	ENSORLG00015019999	rbm12b	97	59.126	Oryzias_latipes_hsok
ENSCVAG00000011047	rbm12b	100	60.342	ENSOMEG00000022523	rbm12b	97	60.342	Oryzias_melastigma
ENSCVAG00000011047	rbm12b	86	48.052	ENSOGAG00000002979	RBM12B	61	48.052	Otolemur_garnettii
ENSCVAG00000011047	rbm12b	86	48.052	ENSPTIG00000020071	RBM12B	65	48.052	Panthera_tigris_altaica
ENSCVAG00000011047	rbm12b	86	46.753	ENSPTRG00000020420	RBM12B	64	46.753	Pan_troglodytes
ENSCVAG00000011047	rbm12b	86	46.753	ENSPANG00000035535	RBM12B	63	46.753	Papio_anubis
ENSCVAG00000011047	rbm12b	100	46.927	ENSPKIG00000018719	rbm12b	99	46.246	Paramormyrops_kingsleyae
ENSCVAG00000011047	rbm12b	76	32.742	ENSPKIG00000014851	zgc:153215	99	32.742	Paramormyrops_kingsleyae
ENSCVAG00000011047	rbm12b	100	37.642	ENSPSIG00000001348	RBM12B	100	37.500	Pelodiscus_sinensis
ENSCVAG00000011047	rbm12b	86	49.351	ENSPEMG00000008279	-	67	49.351	Peromyscus_maniculatus_bairdii
ENSCVAG00000011047	rbm12b	86	45.455	ENSPCIG00000008556	RBM12B	77	45.455	Phascolarctos_cinereus
ENSCVAG00000011047	rbm12b	71	41.803	ENSPFOG00000017451	zgc:153215	68	50.000	Poecilia_formosa
ENSCVAG00000011047	rbm12b	100	73.940	ENSPFOG00000020937	rbm12b	97	73.824	Poecilia_formosa
ENSCVAG00000011047	rbm12b	100	75.667	ENSPLAG00000018782	rbm12b	100	75.667	Poecilia_latipinna
ENSCVAG00000011047	rbm12b	74	30.247	ENSPMEG00000016662	zgc:153215	99	30.041	Poecilia_mexicana
ENSCVAG00000011047	rbm12b	100	75.353	ENSPMEG00000011418	rbm12b	100	75.353	Poecilia_mexicana
ENSCVAG00000011047	rbm12b	100	75.824	ENSPREG00000020770	rbm12b	100	75.824	Poecilia_reticulata
ENSCVAG00000011047	rbm12b	86	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSCVAG00000011047	rbm12b	86	46.753	ENSPCOG00000023546	RBM12B	70	46.753	Propithecus_coquereli
ENSCVAG00000011047	rbm12b	86	48.052	ENSPVAG00000011803	RBM12B	60	48.052	Pteropus_vampyrus
ENSCVAG00000011047	rbm12b	100	58.842	ENSPNYG00000016696	rbm12b	100	58.842	Pundamilia_nyererei
ENSCVAG00000011047	rbm12b	100	43.175	ENSPNAG00000008126	rbm12b	97	43.263	Pygocentrus_nattereri
ENSCVAG00000011047	rbm12b	86	48.000	ENSRNOG00000016330	Rbm12b	66	48.000	Rattus_norvegicus
ENSCVAG00000011047	rbm12b	74	41.616	ENSRNOG00000055292	LOC679087	65	41.365	Rattus_norvegicus
ENSCVAG00000011047	rbm12b	86	46.753	ENSRBIG00000035046	RBM12B	64	46.753	Rhinopithecus_bieti
ENSCVAG00000011047	rbm12b	92	46.753	ENSRROG00000023660	RBM12B	73	46.753	Rhinopithecus_roxellana
ENSCVAG00000011047	rbm12b	86	46.753	ENSSBOG00000027592	RBM12B	63	46.753	Saimiri_boliviensis_boliviensis
ENSCVAG00000011047	rbm12b	86	45.455	ENSSHAG00000015335	RBM12B	77	45.455	Sarcophilus_harrisii
ENSCVAG00000011047	rbm12b	100	44.807	ENSSFOG00015001584	rbm12b	100	44.065	Scleropages_formosus
ENSCVAG00000011047	rbm12b	75	33.004	ENSSFOG00015009427	zgc:153215	99	33.004	Scleropages_formosus
ENSCVAG00000011047	rbm12b	100	57.746	ENSSMAG00000019708	rbm12b	100	57.746	Scophthalmus_maximus
ENSCVAG00000011047	rbm12b	77	31.349	ENSSDUG00000012545	zgc:153215	98	31.028	Seriola_dumerili
ENSCVAG00000011047	rbm12b	100	58.321	ENSSDUG00000006856	rbm12b	100	58.321	Seriola_dumerili
ENSCVAG00000011047	rbm12b	75	51.250	ENSSLDG00000013581	zgc:153215	80	48.315	Seriola_lalandi_dorsalis
ENSCVAG00000011047	rbm12b	100	58.321	ENSSLDG00000016156	rbm12b	100	58.321	Seriola_lalandi_dorsalis
ENSCVAG00000011047	rbm12b	85	38.609	ENSSARG00000011845	-	77	38.569	Sorex_araneus
ENSCVAG00000011047	rbm12b	75	38.196	ENSSPUG00000016954	RBM12B	91	38.104	Sphenodon_punctatus
ENSCVAG00000011047	rbm12b	100	60.094	ENSSPAG00000006774	rbm12b	100	60.094	Stegastes_partitus
ENSCVAG00000011047	rbm12b	74	30.786	ENSSPAG00000023584	zgc:153215	98	30.591	Stegastes_partitus
ENSCVAG00000011047	rbm12b	86	46.667	ENSSSCG00000006110	RBM12B	57	46.667	Sus_scrofa
ENSCVAG00000011047	rbm12b	74	38.632	ENSTGUG00000011860	RBM12B	95	38.632	Taeniopygia_guttata
ENSCVAG00000011047	rbm12b	100	54.460	ENSTRUG00000013738	rbm12b	100	54.460	Takifugu_rubripes
ENSCVAG00000011047	rbm12b	75	41.036	ENSTBEG00000000449	RBM12B	63	41.082	Tupaia_belangeri
ENSCVAG00000011047	rbm12b	86	46.753	ENSUAMG00000023639	RBM12B	63	46.753	Ursus_americanus
ENSCVAG00000011047	rbm12b	86	46.753	ENSUMAG00000016008	RBM12B	61	46.753	Ursus_maritimus
ENSCVAG00000011047	rbm12b	86	45.455	ENSVVUG00000002694	RBM12B	64	45.455	Vulpes_vulpes
ENSCVAG00000011047	rbm12b	97	34.534	ENSXETG00000014696	rbm12b	67	34.468	Xenopus_tropicalis
ENSCVAG00000011047	rbm12b	100	34.897	ENSXETG00000014694	rbm12b	99	37.895	Xenopus_tropicalis
ENSCVAG00000011047	rbm12b	66	70.915	ENSXCOG00000019735	-	99	70.915	Xiphophorus_couchianus
ENSCVAG00000011047	rbm12b	74	30.966	ENSXCOG00000019654	zgc:153215	98	30.137	Xiphophorus_couchianus
ENSCVAG00000011047	rbm12b	100	75.039	ENSXMAG00000014213	rbm12b	100	75.039	Xiphophorus_maculatus