EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000011342 (Gene tree)
Gene ID: -
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5437 bases
Position: chrKL652502.1:1440493-1445929
Accession: ZDB-GENE-040801-108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009384	cwf18	PF08315.12	8.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015781	-	405	-	ENSCVAP00000009384	134 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000011342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011342	ccdc12	100	69.630	ENSG00000160799	CCDC12	76	72.222	Homo_sapiens
ENSCVAG00000011342	ccdc12	100	71.111	ENSAMEG00000012658	CCDC12	81	71.111	Ailuropoda_melanoleuca
ENSCVAG00000011342	ccdc12	91	95.082	ENSACIG00000022676	-	87	95.082	Amphilophus_citrinellus
ENSCVAG00000011342	ccdc12	84	96.429	ENSACIG00000015192	ccdc12	80	96.429	Amphilophus_citrinellus
ENSCVAG00000011342	ccdc12	100	92.537	ENSAOCG00000024127	ccdc12	80	92.537	Amphiprion_ocellaris
ENSCVAG00000011342	ccdc12	100	92.537	ENSAPEG00000009155	ccdc12	71	92.537	Amphiprion_percula
ENSCVAG00000011342	ccdc12	100	93.284	ENSATEG00000004807	ccdc12	100	93.284	Anabas_testudineus
ENSCVAG00000011342	ccdc12	96	73.643	ENSAPLG00000005482	CCDC12	94	73.643	Anas_platyrhynchos
ENSCVAG00000011342	ccdc12	99	77.612	ENSACAG00000004727	CCDC12	69	77.612	Anolis_carolinensis
ENSCVAG00000011342	ccdc12	99	70.149	ENSANAG00000024483	CCDC12	100	70.149	Aotus_nancymaae
ENSCVAG00000011342	ccdc12	100	90.299	ENSACLG00000005356	ccdc12	82	90.299	Astatotilapia_calliptera
ENSCVAG00000011342	ccdc12	100	76.866	ENSACLG00000012742	-	82	76.866	Astatotilapia_calliptera
ENSCVAG00000011342	ccdc12	100	85.185	ENSAMXG00000016319	ccdc12	82	85.185	Astyanax_mexicanus
ENSCVAG00000011342	ccdc12	89	73.950	ENSBTAG00000011311	CCDC12	82	69.343	Bos_taurus
ENSCVAG00000011342	ccdc12	72	44.898	WBGene00022092	Y69A2AR.21	67	41.739	Caenorhabditis_elegans
ENSCVAG00000011342	ccdc12	100	69.630	ENSCJAG00000002280	CCDC12	81	69.630	Callithrix_jacchus
ENSCVAG00000011342	ccdc12	100	71.111	ENSCAFG00000013588	CCDC12	81	71.111	Canis_familiaris
ENSCVAG00000011342	ccdc12	100	71.111	ENSCAFG00020014024	CCDC12	75	71.111	Canis_lupus_dingo
ENSCVAG00000011342	ccdc12	89	73.950	ENSCHIG00000014512	CCDC12	82	69.343	Capra_hircus
ENSCVAG00000011342	ccdc12	100	70.370	ENSTSYG00000032837	CCDC12	81	70.370	Carlito_syrichta
ENSCVAG00000011342	ccdc12	57	79.487	ENSCAPG00000007935	CCDC12	79	78.571	Cavia_aperea
ENSCVAG00000011342	ccdc12	100	71.111	ENSCPOG00000032515	CCDC12	81	71.111	Cavia_porcellus
ENSCVAG00000011342	ccdc12	100	69.630	ENSCCAG00000020126	CCDC12	70	72.222	Cebus_capucinus
ENSCVAG00000011342	ccdc12	100	71.111	ENSCLAG00000016013	CCDC12	81	71.111	Chinchilla_lanigera
ENSCVAG00000011342	ccdc12	100	68.889	ENSCSAG00000016154	CCDC12	75	68.889	Chlorocebus_sabaeus
ENSCVAG00000011342	ccdc12	84	84.956	ENSCPBG00000015804	CCDC12	54	84.956	Chrysemys_picta_bellii
ENSCVAG00000011342	ccdc12	90	54.545	ENSCING00000005261	-	72	54.545	Ciona_intestinalis
ENSCVAG00000011342	ccdc12	100	68.889	ENSCANG00000020857	CCDC12	70	71.429	Colobus_angolensis_palliatus
ENSCVAG00000011342	ccdc12	100	70.370	ENSCGRG00001000459	Ccdc12	81	70.370	Cricetulus_griseus_chok1gshd
ENSCVAG00000011342	ccdc12	100	70.370	ENSCGRG00000012816	Ccdc12	81	70.370	Cricetulus_griseus_crigri
ENSCVAG00000011342	ccdc12	100	91.791	ENSCSEG00000004543	ccdc12	82	91.791	Cynoglossus_semilaevis
ENSCVAG00000011342	ccdc12	97	89.313	ENSDARG00000023003	ccdc12	80	89.313	Danio_rerio
ENSCVAG00000011342	ccdc12	100	71.852	ENSDORG00000016567	-	82	71.852	Dipodomys_ordii
ENSCVAG00000011342	ccdc12	97	64.885	ENSDORG00000024399	-	79	64.885	Dipodomys_ordii
ENSCVAG00000011342	ccdc12	79	46.729	FBgn0039732	CG15525	66	46.729	Drosophila_melanogaster
ENSCVAG00000011342	ccdc12	61	67.073	ENSETEG00000000030	CCDC12	73	67.073	Echinops_telfairi
ENSCVAG00000011342	ccdc12	84	65.487	ENSEBUG00000005674	ccdc12	81	63.359	Eptatretus_burgeri
ENSCVAG00000011342	ccdc12	100	70.370	ENSEASG00005008148	-	56	70.370	Equus_asinus_asinus
ENSCVAG00000011342	ccdc12	100	63.704	ENSECAG00000008649	CCDC12	81	63.704	Equus_caballus
ENSCVAG00000011342	ccdc12	100	83.824	ENSELUG00000024105	ccdc12	91	90.265	Esox_lucius
ENSCVAG00000011342	ccdc12	100	70.370	ENSFCAG00000015474	CCDC12	81	70.370	Felis_catus
ENSCVAG00000011342	ccdc12	99	71.852	ENSFALG00000001895	CCDC12	83	71.852	Ficedula_albicollis
ENSCVAG00000011342	ccdc12	100	71.111	ENSFDAG00000002549	CCDC12	82	71.111	Fukomys_damarensis
ENSCVAG00000011342	ccdc12	100	97.761	ENSFHEG00000016247	ccdc12	76	97.761	Fundulus_heteroclitus
ENSCVAG00000011342	ccdc12	82	94.545	ENSGMOG00000016901	ccdc12	67	94.545	Gadus_morhua
ENSCVAG00000011342	ccdc12	99	96.992	ENSGAFG00000006762	ccdc12	91	91.597	Gambusia_affinis
ENSCVAG00000011342	ccdc12	100	91.045	ENSGACG00000008629	ccdc12	82	91.045	Gasterosteus_aculeatus
ENSCVAG00000011342	ccdc12	100	75.182	ENSGAGG00000019688	CCDC12	80	75.182	Gopherus_agassizii
ENSCVAG00000011342	ccdc12	94	72.222	ENSGGOG00000009012	CCDC12	70	72.222	Gorilla_gorilla
ENSCVAG00000011342	ccdc12	100	90.299	ENSHBUG00000016447	ccdc12	82	90.299	Haplochromis_burtoni
ENSCVAG00000011342	ccdc12	100	71.111	ENSHGLG00000014058	CCDC12	81	71.111	Heterocephalus_glaber_female
ENSCVAG00000011342	ccdc12	100	71.111	ENSHGLG00100005918	CCDC12	81	71.111	Heterocephalus_glaber_male
ENSCVAG00000011342	ccdc12	100	86.667	ENSHCOG00000015164	ccdc12	82	86.667	Hippocampus_comes
ENSCVAG00000011342	ccdc12	100	79.851	ENSIPUG00000001310	Ccdc12	82	79.851	Ictalurus_punctatus
ENSCVAG00000011342	ccdc12	100	71.111	ENSSTOG00000003085	CCDC12	81	71.111	Ictidomys_tridecemlineatus
ENSCVAG00000011342	ccdc12	100	69.630	ENSJJAG00000014918	Ccdc12	81	69.630	Jaculus_jaculus
ENSCVAG00000011342	ccdc12	99	90.299	ENSKMAG00000013891	ccdc12	81	90.299	Kryptolebias_marmoratus
ENSCVAG00000011342	ccdc12	98	93.130	ENSLBEG00000024714	ccdc12	70	93.130	Labrus_bergylta
ENSCVAG00000011342	ccdc12	100	85.821	ENSLOCG00000005683	ccdc12	75	85.821	Lepisosteus_oculatus
ENSCVAG00000011342	ccdc12	83	77.679	ENSLAFG00000022573	-	98	77.679	Loxodonta_africana
ENSCVAG00000011342	ccdc12	99	69.403	ENSLAFG00000027745	-	85	69.403	Loxodonta_africana
ENSCVAG00000011342	ccdc12	100	68.889	ENSMFAG00000002976	CCDC12	75	68.889	Macaca_fascicularis
ENSCVAG00000011342	ccdc12	100	68.889	ENSMMUG00000019810	CCDC12	75	68.889	Macaca_mulatta
ENSCVAG00000011342	ccdc12	100	68.889	ENSMNEG00000035785	CCDC12	75	68.889	Macaca_nemestrina
ENSCVAG00000011342	ccdc12	100	68.889	ENSMLEG00000038060	CCDC12	75	68.889	Mandrillus_leucophaeus
ENSCVAG00000011342	ccdc12	100	92.537	ENSMAMG00000012165	ccdc12	85	97.321	Mastacembelus_armatus
ENSCVAG00000011342	ccdc12	100	77.612	ENSMZEG00005019013	-	82	77.612	Maylandia_zebra
ENSCVAG00000011342	ccdc12	100	91.045	ENSMZEG00005014728	ccdc12	82	91.045	Maylandia_zebra
ENSCVAG00000011342	ccdc12	96	72.868	ENSMGAG00000002815	CCDC12	74	72.868	Meleagris_gallopavo
ENSCVAG00000011342	ccdc12	100	68.889	ENSMAUG00000008879	Ccdc12	81	68.889	Mesocricetus_auratus
ENSCVAG00000011342	ccdc12	100	69.118	ENSMICG00000032886	CCDC12	81	69.853	Microcebus_murinus
ENSCVAG00000011342	ccdc12	100	69.630	ENSMOCG00000004483	Ccdc12	81	69.630	Microtus_ochrogaster
ENSCVAG00000011342	ccdc12	83	92.793	ENSMMOG00000001860	ccdc12	77	92.793	Mola_mola
ENSCVAG00000011342	ccdc12	100	75.000	ENSMODG00000013967	-	81	75.000	Monodelphis_domestica
ENSCVAG00000011342	ccdc12	100	67.153	ENSMODG00000025021	-	81	67.153	Monodelphis_domestica
ENSCVAG00000011342	ccdc12	85	72.807	ENSMODG00000022615	-	68	72.807	Monodelphis_domestica
ENSCVAG00000011342	ccdc12	100	93.284	ENSMALG00000011850	ccdc12	82	93.284	Monopterus_albus
ENSCVAG00000011342	ccdc12	100	70.370	MGP_CAROLIEiJ_G0032737	-	71	91.379	Mus_caroli
ENSCVAG00000011342	ccdc12	100	70.803	ENSMUSG00000019659	Ccdc12	66	91.379	Mus_musculus
ENSCVAG00000011342	ccdc12	100	70.370	MGP_PahariEiJ_G0015604	Ccdc12	67	91.379	Mus_pahari
ENSCVAG00000011342	ccdc12	100	70.803	MGP_SPRETEiJ_G0033885	Ccdc12	67	91.379	Mus_spretus
ENSCVAG00000011342	ccdc12	100	67.407	ENSMLUG00000009547	CCDC12	92	68.548	Myotis_lucifugus
ENSCVAG00000011342	ccdc12	100	71.111	ENSNGAG00000004149	Ccdc12	81	71.111	Nannospalax_galili
ENSCVAG00000011342	ccdc12	88	92.373	ENSNBRG00000015275	ccdc12	71	92.373	Neolamprologus_brichardi
ENSCVAG00000011342	ccdc12	100	69.630	ENSNLEG00000006219	CCDC12	81	69.630	Nomascus_leucogenys
ENSCVAG00000011342	ccdc12	78	78.095	ENSOPRG00000005086	CCDC12	65	78.302	Ochotona_princeps
ENSCVAG00000011342	ccdc12	100	71.111	ENSODEG00000012202	CCDC12	81	71.111	Octodon_degus
ENSCVAG00000011342	ccdc12	100	91.045	ENSONIG00000003061	ccdc12	82	91.045	Oreochromis_niloticus
ENSCVAG00000011342	ccdc12	99	73.684	ENSOANG00000004263	-	100	73.684	Ornithorhynchus_anatinus
ENSCVAG00000011342	ccdc12	100	71.111	ENSOCUG00000012431	CCDC12	69	71.111	Oryctolagus_cuniculus
ENSCVAG00000011342	ccdc12	100	90.299	ENSORLG00000008126	ccdc12	100	75.940	Oryzias_latipes
ENSCVAG00000011342	ccdc12	99	92.481	ENSORLG00020013927	ccdc12	82	92.481	Oryzias_latipes_hni
ENSCVAG00000011342	ccdc12	99	92.481	ENSORLG00015020115	ccdc12	82	92.481	Oryzias_latipes_hsok
ENSCVAG00000011342	ccdc12	99	93.985	ENSOMEG00000014082	ccdc12	82	93.985	Oryzias_melastigma
ENSCVAG00000011342	ccdc12	99	93.985	ENSOMEG00000022304	ccdc12	82	93.985	Oryzias_melastigma
ENSCVAG00000011342	ccdc12	83	75.000	ENSOGAG00000016807	CCDC12	100	75.000	Otolemur_garnettii
ENSCVAG00000011342	ccdc12	89	73.950	ENSOARG00000006426	CCDC12	100	69.343	Ovis_aries
ENSCVAG00000011342	ccdc12	94	72.222	ENSPPAG00000028782	CCDC12	70	72.222	Pan_paniscus
ENSCVAG00000011342	ccdc12	100	70.370	ENSPPRG00000013547	CCDC12	81	70.370	Panthera_pardus
ENSCVAG00000011342	ccdc12	100	70.370	ENSPTIG00000014875	CCDC12	78	70.370	Panthera_tigris_altaica
ENSCVAG00000011342	ccdc12	94	72.222	ENSPTRG00000014862	CCDC12	70	72.222	Pan_troglodytes
ENSCVAG00000011342	ccdc12	100	68.889	ENSPANG00000017485	CCDC12	72	71.429	Papio_anubis
ENSCVAG00000011342	ccdc12	81	86.239	ENSPKIG00000019130	ccdc12	80	80.303	Paramormyrops_kingsleyae
ENSCVAG00000011342	ccdc12	83	85.586	ENSPSIG00000010867	CCDC12	100	85.586	Pelodiscus_sinensis
ENSCVAG00000011342	ccdc12	100	90.299	ENSPMGG00000012211	ccdc12	82	90.299	Periophthalmus_magnuspinnatus
ENSCVAG00000011342	ccdc12	100	57.353	ENSPEMG00000001376	-	83	57.353	Peromyscus_maniculatus_bairdii
ENSCVAG00000011342	ccdc12	100	70.370	ENSPEMG00000022196	-	81	70.370	Peromyscus_maniculatus_bairdii
ENSCVAG00000011342	ccdc12	99	74.242	ENSPMAG00000000005	ccdc12	77	74.242	Petromyzon_marinus
ENSCVAG00000011342	ccdc12	100	76.119	ENSPCIG00000025941	CCDC12	81	76.119	Phascolarctos_cinereus
ENSCVAG00000011342	ccdc12	100	97.761	ENSPFOG00000000343	ccdc12	82	97.761	Poecilia_formosa
ENSCVAG00000011342	ccdc12	100	98.507	ENSPLAG00000019010	ccdc12	82	98.507	Poecilia_latipinna
ENSCVAG00000011342	ccdc12	100	97.761	ENSPMEG00000022371	ccdc12	66	97.761	Poecilia_mexicana
ENSCVAG00000011342	ccdc12	100	97.761	ENSPREG00000020932	ccdc12	66	97.761	Poecilia_reticulata
ENSCVAG00000011342	ccdc12	100	69.630	ENSPPYG00000013924	CCDC12	62	72.222	Pongo_abelii
ENSCVAG00000011342	ccdc12	100	70.588	ENSPCAG00000005800	CCDC12	82	70.588	Procavia_capensis
ENSCVAG00000011342	ccdc12	100	69.118	ENSPCOG00000018682	CCDC12	76	69.853	Propithecus_coquereli
ENSCVAG00000011342	ccdc12	100	70.370	ENSPVAG00000004204	CCDC12	81	70.370	Pteropus_vampyrus
ENSCVAG00000011342	ccdc12	100	91.045	ENSPNYG00000016295	ccdc12	82	91.045	Pundamilia_nyererei
ENSCVAG00000011342	ccdc12	84	92.857	ENSPNAG00000028558	ccdc12	90	92.857	Pygocentrus_nattereri
ENSCVAG00000011342	ccdc12	100	70.370	ENSRNOG00000020946	Ccdc12	81	70.370	Rattus_norvegicus
ENSCVAG00000011342	ccdc12	94	71.429	ENSRBIG00000039910	CCDC12	70	71.429	Rhinopithecus_bieti
ENSCVAG00000011342	ccdc12	100	68.889	ENSRROG00000039721	CCDC12	81	68.889	Rhinopithecus_roxellana
ENSCVAG00000011342	ccdc12	100	69.630	ENSSBOG00000035443	CCDC12	70	72.222	Saimiri_boliviensis_boliviensis
ENSCVAG00000011342	ccdc12	100	74.627	ENSSHAG00000003265	-	81	74.627	Sarcophilus_harrisii
ENSCVAG00000011342	ccdc12	98	80.303	ENSSFOG00015001307	ccdc12	80	80.303	Scleropages_formosus
ENSCVAG00000011342	ccdc12	89	94.958	ENSSMAG00000019856	ccdc12	82	93.333	Scophthalmus_maximus
ENSCVAG00000011342	ccdc12	100	96.269	ENSSDUG00000006549	ccdc12	82	96.269	Seriola_dumerili
ENSCVAG00000011342	ccdc12	100	96.269	ENSSLDG00000015956	ccdc12	82	96.269	Seriola_lalandi_dorsalis
ENSCVAG00000011342	ccdc12	84	61.607	ENSSPUG00000013054	CCDC12	69	61.607	Sphenodon_punctatus
ENSCVAG00000011342	ccdc12	100	93.284	ENSSPAG00000007010	ccdc12	82	93.284	Stegastes_partitus
ENSCVAG00000011342	ccdc12	100	70.149	ENSSSCG00000011329	-	81	70.149	Sus_scrofa
ENSCVAG00000011342	ccdc12	75	51.485	ENSSSCG00000007882	-	69	51.485	Sus_scrofa
ENSCVAG00000011342	ccdc12	60	71.951	ENSTGUG00000000186	CCDC12	66	71.951	Taeniopygia_guttata
ENSCVAG00000011342	ccdc12	82	95.455	ENSTRUG00000014023	ccdc12	61	95.455	Takifugu_rubripes
ENSCVAG00000011342	ccdc12	99	86.364	ENSTNIG00000018407	ccdc12	80	86.364	Tetraodon_nigroviridis
ENSCVAG00000011342	ccdc12	100	43.382	ENSTBEG00000000048	CCDC12	81	43.382	Tupaia_belangeri
ENSCVAG00000011342	ccdc12	84	78.261	ENSTTRG00000015854	CCDC12	69	78.448	Tursiops_truncatus
ENSCVAG00000011342	ccdc12	100	62.222	ENSUAMG00000025548	CCDC12	76	76.147	Ursus_americanus
ENSCVAG00000011342	ccdc12	100	71.111	ENSUMAG00000004346	CCDC12	81	71.111	Ursus_maritimus
ENSCVAG00000011342	ccdc12	100	71.111	ENSVVUG00000004582	CCDC12	81	71.111	Vulpes_vulpes
ENSCVAG00000011342	ccdc12	99	76.119	ENSXETG00000013123	ccdc12	99	76.119	Xenopus_tropicalis
ENSCVAG00000011342	ccdc12	99	98.496	ENSXCOG00000019741	ccdc12	82	98.496	Xiphophorus_couchianus
ENSCVAG00000011342	ccdc12	99	97.744	ENSXMAG00000014098	ccdc12	66	97.744	Xiphophorus_maculatus