EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011381 (Gene tree)
Gene ID: 107089245
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: ADP-ribosylation factor 5-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6384 bases
Position: chrKL652744.1:561226-567609
Accession: 107089245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009422	MMR_HSR1	PF01926.23	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015826	-	1923	XM_015381922	ENSCVAP00000009422	180 (aa)	XP_015237408	UPI000742CA0C
ENSCVAT00000015821	-	471	-	ENSCVAP00000026075	156 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000011381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011381	-	99	91.620	ENSCVAG00000007314	-	99	91.620
ENSCVAG00000011381	-	99	45.699	ENSCVAG00000023139	-	94	45.699
ENSCVAG00000011381	-	100	79.444	ENSCVAG00000021619	-	100	79.444
ENSCVAG00000011381	-	98	44.068	ENSCVAG00000012706	arl5c	98	44.068
ENSCVAG00000011381	-	98	40.884	ENSCVAG00000015183	ARL6	97	40.884
ENSCVAG00000011381	-	92	34.337	ENSCVAG00000020378	arl8ba	89	34.337
ENSCVAG00000011381	-	99	91.620	ENSCVAG00000009124	ARF5	99	91.620
ENSCVAG00000011381	-	89	30.058	ENSCVAG00000022959	sar1b	87	30.058
ENSCVAG00000011381	-	91	47.059	ENSCVAG00000004305	arl4aa	85	47.059
ENSCVAG00000011381	-	78	36.250	ENSCVAG00000016249	ARL6	84	36.250
ENSCVAG00000011381	-	89	45.963	ENSCVAG00000016797	-	88	45.963
ENSCVAG00000011381	-	98	45.763	ENSCVAG00000020833	ARL5A	98	45.763
ENSCVAG00000011381	-	97	45.402	ENSCVAG00000006913	arl8	97	45.402
ENSCVAG00000011381	-	77	65.217	ENSCVAG00000013902	-	84	65.217
ENSCVAG00000011381	-	91	46.626	ENSCVAG00000021960	arl3	90	46.626
ENSCVAG00000011381	-	98	83.051	ENSCVAG00000000745	arf2b	98	83.051
ENSCVAG00000011381	-	100	79.444	ENSCVAG00000018314	-	100	79.444
ENSCVAG00000011381	-	95	45.763	ENSCVAG00000020902	arl4cb	92	45.763
ENSCVAG00000011381	-	98	59.322	ENSCVAG00000001731	arl1	98	59.322
ENSCVAG00000011381	-	98	80.226	ENSCVAG00000001271	arf3b	98	80.226
ENSCVAG00000011381	-	91	49.091	ENSCVAG00000008445	arl2	89	49.091
ENSCVAG00000011381	-	92	32.184	ENSCVAG00000001545	arl13b	69	32.184
ENSCVAG00000011381	-	97	82.184	ENSCVAG00000013374	-	97	82.184
ENSCVAG00000011381	-	87	33.121	ENSCVAG00000005239	ARL8B	95	33.121
ENSCVAG00000011381	-	95	42.197	ENSCVAG00000010611	arl3l2	93	42.197
ENSCVAG00000011381	-	89	32.000	ENSCVAG00000015162	sar1ab	87	32.000
ENSCVAG00000011381	-	91	41.818	ENSCVAG00000019595	arl11	96	41.818
ENSCVAG00000011381	-	98	80.226	ENSCVAG00000013760	-	86	80.226
ENSCVAG00000011381	-	89	32.000	ENSCVAG00000006500	-	87	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011381	-	99	87.709	ENSG00000004059	ARF5	100	88.158	Homo_sapiens
ENSCVAG00000011381	-	100	93.889	ENSAPOG00000000667	-	100	93.889	Acanthochromis_polyacanthus
ENSCVAG00000011381	-	99	87.709	ENSAMEG00000004635	ARF5	99	87.709	Ailuropoda_melanoleuca
ENSCVAG00000011381	-	98	70.056	ENSACIG00000014610	zgc:110286	98	70.056	Amphilophus_citrinellus
ENSCVAG00000011381	-	100	96.111	ENSACIG00000000467	-	100	96.111	Amphilophus_citrinellus
ENSCVAG00000011381	-	99	91.061	ENSACIG00000005843	arf5	99	91.061	Amphilophus_citrinellus
ENSCVAG00000011381	-	100	93.333	ENSAOCG00000008113	-	100	93.333	Amphiprion_ocellaris
ENSCVAG00000011381	-	100	90.000	ENSAOCG00000023329	arf5	100	90.000	Amphiprion_ocellaris
ENSCVAG00000011381	-	100	90.000	ENSAPEG00000024614	arf5	100	90.000	Amphiprion_percula
ENSCVAG00000011381	-	100	93.333	ENSAPEG00000003087	-	100	93.333	Amphiprion_percula
ENSCVAG00000011381	-	99	90.503	ENSATEG00000003053	ARF5	99	90.503	Anabas_testudineus
ENSCVAG00000011381	-	100	95.000	ENSATEG00000001302	-	100	95.000	Anabas_testudineus
ENSCVAG00000011381	-	99	87.709	ENSANAG00000026446	ARF5	99	87.709	Aotus_nancymaae
ENSCVAG00000011381	-	100	95.000	ENSACLG00000025604	-	100	95.000	Astatotilapia_calliptera
ENSCVAG00000011381	-	99	91.620	ENSACLG00000005705	arf5	99	91.620	Astatotilapia_calliptera
ENSCVAG00000011381	-	99	88.827	ENSAMXG00000031467	arf4a	99	88.827	Astyanax_mexicanus
ENSCVAG00000011381	-	99	92.179	ENSAMXG00000004249	-	99	92.179	Astyanax_mexicanus
ENSCVAG00000011381	-	99	91.061	ENSAMXG00000031774	ARF5	99	91.061	Astyanax_mexicanus
ENSCVAG00000011381	-	99	91.620	ENSAMXG00000038224	-	99	91.620	Astyanax_mexicanus
ENSCVAG00000011381	-	99	87.709	ENSBTAG00000009366	ARF5	99	87.709	Bos_taurus
ENSCVAG00000011381	-	99	86.592	WBGene00000183	arf-3	99	86.592	Caenorhabditis_elegans
ENSCVAG00000011381	-	99	87.709	ENSCJAG00000017604	ARF5	99	87.709	Callithrix_jacchus
ENSCVAG00000011381	-	99	73.709	ENSCAFG00020021629	ARF5	99	73.709	Canis_lupus_dingo
ENSCVAG00000011381	-	99	87.709	ENSCHIG00000018906	ARF5	99	87.709	Capra_hircus
ENSCVAG00000011381	-	99	86.111	ENSCPOG00000006239	ARF5	99	86.111	Cavia_porcellus
ENSCVAG00000011381	-	99	87.709	ENSCCAG00000027943	-	99	87.709	Cebus_capucinus
ENSCVAG00000011381	-	99	87.709	ENSCATG00000010217	ARF5	99	87.709	Cercocebus_atys
ENSCVAG00000011381	-	99	87.709	ENSCLAG00000007930	ARF5	99	87.709	Chinchilla_lanigera
ENSCVAG00000011381	-	99	87.709	ENSCSAG00000010208	ARF5	99	87.709	Chlorocebus_sabaeus
ENSCVAG00000011381	-	100	74.444	ENSCING00000004846	-	100	74.444	Ciona_intestinalis
ENSCVAG00000011381	-	100	72.527	ENSCSAVG00000001959	-	100	72.527	Ciona_savignyi
ENSCVAG00000011381	-	89	87.500	ENSCANG00000037234	ARF5	98	87.500	Colobus_angolensis_palliatus
ENSCVAG00000011381	-	99	87.709	ENSCGRG00001024919	Arf5	99	87.709	Cricetulus_griseus_chok1gshd
ENSCVAG00000011381	-	99	83.799	ENSCSEG00000006004	arf5	99	83.799	Cynoglossus_semilaevis
ENSCVAG00000011381	-	99	91.620	ENSDARG00000113899	zgc:77650	99	91.620	Danio_rerio
ENSCVAG00000011381	-	99	71.111	ENSDARG00000074210	ARF5	88	71.111	Danio_rerio
ENSCVAG00000011381	-	99	92.179	ENSDARG00000070472	arf5	99	92.179	Danio_rerio
ENSCVAG00000011381	-	99	88.827	ENSDARG00000045989	arf4a	99	88.827	Danio_rerio
ENSCVAG00000011381	-	99	87.709	ENSDORG00000000325	Arf5	99	87.709	Dipodomys_ordii
ENSCVAG00000011381	-	99	85.475	FBgn0013749	Arf102F	99	85.475	Drosophila_melanogaster
ENSCVAG00000011381	-	97	84.483	ENSETEG00000009275	ARF5	99	84.483	Echinops_telfairi
ENSCVAG00000011381	-	99	71.508	ENSEBUG00000004484	-	99	71.508	Eptatretus_burgeri
ENSCVAG00000011381	-	99	84.916	ENSEBUG00000014420	-	99	84.916	Eptatretus_burgeri
ENSCVAG00000011381	-	99	73.184	ENSELUG00000014428	arf4	99	73.184	Esox_lucius
ENSCVAG00000011381	-	99	87.709	ENSFCAG00000005482	ARF5	99	87.709	Felis_catus
ENSCVAG00000011381	-	99	91.061	ENSFHEG00000023119	arf5	99	91.061	Fundulus_heteroclitus
ENSCVAG00000011381	-	99	86.034	ENSGMOG00000019109	-	99	86.034	Gadus_morhua
ENSCVAG00000011381	-	99	86.592	ENSGMOG00000008747	arf5	99	86.592	Gadus_morhua
ENSCVAG00000011381	-	99	91.620	ENSGAFG00000018703	arf5	99	91.620	Gambusia_affinis
ENSCVAG00000011381	-	100	96.667	ENSGAFG00000005163	-	100	96.667	Gambusia_affinis
ENSCVAG00000011381	-	99	91.061	ENSGACG00000000686	arf5	99	91.061	Gasterosteus_aculeatus
ENSCVAG00000011381	-	100	89.444	ENSGACG00000012500	-	100	89.444	Gasterosteus_aculeatus
ENSCVAG00000011381	-	99	88.268	ENSGAGG00000000231	ARF5	99	88.268	Gopherus_agassizii
ENSCVAG00000011381	-	99	87.709	ENSGGOG00000016749	ARF5	99	87.709	Gorilla_gorilla
ENSCVAG00000011381	-	99	91.620	ENSHBUG00000008546	arf5	99	91.620	Haplochromis_burtoni
ENSCVAG00000011381	-	100	95.000	ENSHBUG00000011041	-	100	95.000	Haplochromis_burtoni
ENSCVAG00000011381	-	99	87.709	ENSHGLG00000007494	ARF5	99	87.709	Heterocephalus_glaber_female
ENSCVAG00000011381	-	99	86.592	ENSHGLG00100006040	ARF5	60	86.592	Heterocephalus_glaber_male
ENSCVAG00000011381	-	99	88.268	ENSHCOG00000015577	-	100	88.268	Hippocampus_comes
ENSCVAG00000011381	-	99	91.061	ENSIPUG00000004215	arf5	99	91.061	Ictalurus_punctatus
ENSCVAG00000011381	-	99	91.061	ENSIPUG00000004159	Arf5	99	91.061	Ictalurus_punctatus
ENSCVAG00000011381	-	99	70.391	ENSIPUG00000006913	-	70	70.391	Ictalurus_punctatus
ENSCVAG00000011381	-	99	88.827	ENSIPUG00000007016	arf4	99	88.827	Ictalurus_punctatus
ENSCVAG00000011381	-	99	87.709	ENSSTOG00000002104	ARF5	99	87.709	Ictidomys_tridecemlineatus
ENSCVAG00000011381	-	99	87.709	ENSJJAG00000005105	Arf5	99	87.709	Jaculus_jaculus
ENSCVAG00000011381	-	100	97.222	ENSKMAG00000012816	-	100	97.222	Kryptolebias_marmoratus
ENSCVAG00000011381	-	99	84.831	ENSLBEG00000012002	-	98	84.831	Labrus_bergylta
ENSCVAG00000011381	-	99	90.503	ENSLBEG00000026532	arf5	99	90.503	Labrus_bergylta
ENSCVAG00000011381	-	99	87.709	ENSLAFG00000011469	ARF5	99	87.709	Loxodonta_africana
ENSCVAG00000011381	-	99	87.709	ENSMFAG00000019772	ARF5	99	87.709	Macaca_fascicularis
ENSCVAG00000011381	-	99	87.709	ENSMMUG00000046381	ARF5	99	87.709	Macaca_mulatta
ENSCVAG00000011381	-	99	87.709	ENSMNEG00000040893	ARF5	99	87.709	Macaca_nemestrina
ENSCVAG00000011381	-	99	89.944	ENSMAMG00000021160	arf5	99	89.944	Mastacembelus_armatus
ENSCVAG00000011381	-	100	93.889	ENSMAMG00000008223	-	100	93.889	Mastacembelus_armatus
ENSCVAG00000011381	-	99	91.620	ENSMZEG00005015033	arf5	66	91.620	Maylandia_zebra
ENSCVAG00000011381	-	88	94.304	ENSMZEG00005019741	-	94	94.304	Maylandia_zebra
ENSCVAG00000011381	-	99	87.709	ENSMAUG00000014825	Arf5	99	87.709	Mesocricetus_auratus
ENSCVAG00000011381	-	99	87.709	ENSMICG00000000091	ARF5	99	87.709	Microcebus_murinus
ENSCVAG00000011381	-	99	87.709	ENSMOCG00000022861	Arf5	99	87.709	Microtus_ochrogaster
ENSCVAG00000011381	-	99	87.151	ENSMODG00000015229	ARF5	99	87.151	Monodelphis_domestica
ENSCVAG00000011381	-	99	90.503	ENSMALG00000010117	-	99	90.503	Monopterus_albus
ENSCVAG00000011381	-	100	95.000	ENSMALG00000006020	-	100	95.000	Monopterus_albus
ENSCVAG00000011381	-	99	68.715	ENSMALG00000022638	zgc:110286	100	68.715	Monopterus_albus
ENSCVAG00000011381	-	99	87.709	MGP_CAROLIEiJ_G0028156	Arf5	99	87.709	Mus_caroli
ENSCVAG00000011381	-	99	87.709	ENSMUSG00000020440	Arf5	99	87.709	Mus_musculus
ENSCVAG00000011381	-	99	87.709	MGP_PahariEiJ_G0021914	Arf5	99	87.709	Mus_pahari
ENSCVAG00000011381	-	99	87.709	MGP_SPRETEiJ_G0029156	Arf5	99	87.709	Mus_spretus
ENSCVAG00000011381	-	99	87.709	ENSMPUG00000006675	ARF5	99	87.709	Mustela_putorius_furo
ENSCVAG00000011381	-	99	87.709	ENSMLUG00000017122	ARF5	99	87.709	Myotis_lucifugus
ENSCVAG00000011381	-	99	87.709	ENSNGAG00000011743	Arf5	99	87.709	Nannospalax_galili
ENSCVAG00000011381	-	99	91.620	ENSNBRG00000018854	arf5	99	91.620	Neolamprologus_brichardi
ENSCVAG00000011381	-	99	87.709	ENSODEG00000011800	ARF5	99	87.709	Octodon_degus
ENSCVAG00000011381	-	99	91.620	ENSONIG00000007594	arf5	99	91.620	Oreochromis_niloticus
ENSCVAG00000011381	-	100	95.000	ENSONIG00000014890	-	100	95.000	Oreochromis_niloticus
ENSCVAG00000011381	-	99	87.709	ENSOCUG00000024365	ARF5	99	87.709	Oryctolagus_cuniculus
ENSCVAG00000011381	-	100	94.444	ENSORLG00020001755	-	100	94.444	Oryzias_latipes_hni
ENSCVAG00000011381	-	99	91.061	ENSOMEG00000020821	ARF5	99	91.061	Oryzias_melastigma
ENSCVAG00000011381	-	100	93.889	ENSOMEG00000000211	-	65	93.889	Oryzias_melastigma
ENSCVAG00000011381	-	99	87.709	ENSOGAG00000013336	ARF5	99	87.709	Otolemur_garnettii
ENSCVAG00000011381	-	99	87.709	ENSPPAG00000037755	ARF5	99	87.709	Pan_paniscus
ENSCVAG00000011381	-	99	87.709	ENSPPRG00000004674	ARF5	99	87.709	Panthera_pardus
ENSCVAG00000011381	-	99	87.709	ENSPTRG00000019651	ARF5	99	87.709	Pan_troglodytes
ENSCVAG00000011381	-	99	87.709	ENSPANG00000032970	ARF5	99	87.709	Papio_anubis
ENSCVAG00000011381	-	99	89.944	ENSPKIG00000025381	-	99	89.944	Paramormyrops_kingsleyae
ENSCVAG00000011381	-	100	90.000	ENSPKIG00000013814	-	100	90.000	Paramormyrops_kingsleyae
ENSCVAG00000011381	-	99	87.709	ENSPKIG00000025349	arf4a	99	87.709	Paramormyrops_kingsleyae
ENSCVAG00000011381	-	99	85.475	ENSPMGG00000009985	-	99	85.475	Periophthalmus_magnuspinnatus
ENSCVAG00000011381	-	99	87.709	ENSPEMG00000021476	Arf5	99	87.709	Peromyscus_maniculatus_bairdii
ENSCVAG00000011381	-	99	78.771	ENSPMAG00000009600	arf4a	100	78.771	Petromyzon_marinus
ENSCVAG00000011381	-	100	96.133	ENSPFOG00000017992	-	100	96.133	Poecilia_formosa
ENSCVAG00000011381	-	99	91.620	ENSPFOG00000015817	arf5	99	91.620	Poecilia_formosa
ENSCVAG00000011381	-	100	96.667	ENSPLAG00000015630	-	100	96.667	Poecilia_latipinna
ENSCVAG00000011381	-	99	91.620	ENSPLAG00000006742	arf5	99	91.620	Poecilia_latipinna
ENSCVAG00000011381	-	99	91.620	ENSPMEG00000009605	arf5	99	91.620	Poecilia_mexicana
ENSCVAG00000011381	-	100	96.667	ENSPMEG00000004624	-	100	96.667	Poecilia_mexicana
ENSCVAG00000011381	-	99	87.709	ENSPCOG00000027640	ARF5	99	87.709	Propithecus_coquereli
ENSCVAG00000011381	-	99	87.709	ENSPVAG00000013940	ARF5	99	87.709	Pteropus_vampyrus
ENSCVAG00000011381	-	99	91.620	ENSPNYG00000001663	arf5	99	91.620	Pundamilia_nyererei
ENSCVAG00000011381	-	100	95.000	ENSPNYG00000004931	-	100	95.000	Pundamilia_nyererei
ENSCVAG00000011381	-	99	70.950	ENSPNAG00000004475	-	99	70.950	Pygocentrus_nattereri
ENSCVAG00000011381	-	99	87.709	ENSPNAG00000004745	arf4a	99	87.709	Pygocentrus_nattereri
ENSCVAG00000011381	-	99	74.860	ENSPNAG00000005054	-	99	74.860	Pygocentrus_nattereri
ENSCVAG00000011381	-	99	91.620	ENSPNAG00000024427	-	99	91.620	Pygocentrus_nattereri
ENSCVAG00000011381	-	99	87.709	ENSRNOG00000007806	Arf5	99	87.709	Rattus_norvegicus
ENSCVAG00000011381	-	99	87.709	ENSRBIG00000039868	ARF5	99	87.709	Rhinopithecus_bieti
ENSCVAG00000011381	-	99	87.709	ENSRROG00000041157	ARF5	99	87.709	Rhinopithecus_roxellana
ENSCVAG00000011381	-	99	87.709	ENSSBOG00000021669	ARF5	99	87.709	Saimiri_boliviensis_boliviensis
ENSCVAG00000011381	-	99	87.151	ENSSHAG00000015053	ARF5	99	87.151	Sarcophilus_harrisii
ENSCVAG00000011381	-	99	90.503	ENSSFOG00015020707	ARF5	99	90.503	Scleropages_formosus
ENSCVAG00000011381	-	99	81.006	ENSSFOG00015007701	-	99	81.006	Scleropages_formosus
ENSCVAG00000011381	-	100	91.111	ENSSMAG00000004541	-	100	91.111	Scophthalmus_maximus
ENSCVAG00000011381	-	99	89.385	ENSSMAG00000011361	arf5	99	89.385	Scophthalmus_maximus
ENSCVAG00000011381	-	99	90.503	ENSSDUG00000005105	arf5	99	90.503	Seriola_dumerili
ENSCVAG00000011381	-	99	90.503	ENSSLDG00000017188	arf5	99	90.503	Seriola_lalandi_dorsalis
ENSCVAG00000011381	-	99	89.385	ENSSPAG00000014434	arf5	99	89.385	Stegastes_partitus
ENSCVAG00000011381	-	100	93.889	ENSSPAG00000022680	-	100	93.889	Stegastes_partitus
ENSCVAG00000011381	-	99	87.709	ENSSSCG00000016593	ARF5	99	87.709	Sus_scrofa
ENSCVAG00000011381	-	99	87.709	ENSTRUG00000025462	-	100	87.709	Takifugu_rubripes
ENSCVAG00000011381	-	99	89.385	ENSTNIG00000003348	arf5	100	89.385	Tetraodon_nigroviridis
ENSCVAG00000011381	-	99	84.916	ENSTNIG00000017954	-	100	84.916	Tetraodon_nigroviridis
ENSCVAG00000011381	-	89	88.820	ENSTTRG00000006043	ARF5	99	88.820	Tursiops_truncatus
ENSCVAG00000011381	-	99	87.709	ENSUAMG00000012982	ARF5	99	87.709	Ursus_americanus
ENSCVAG00000011381	-	99	87.709	ENSVVUG00000007062	ARF5	99	87.709	Vulpes_vulpes
ENSCVAG00000011381	-	100	96.667	ENSXCOG00000020384	-	100	96.667	Xiphophorus_couchianus
ENSCVAG00000011381	-	100	96.667	ENSXMAG00000004558	-	100	96.667	Xiphophorus_maculatus
ENSCVAG00000011381	-	99	91.620	ENSXMAG00000015306	arf5	99	91.620	Xiphophorus_maculatus