EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011404 (Gene tree)
Gene ID: 107084802
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8257 bases
Position: chrKL652609.1:1473937-1482193
Accession: 107084802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009403	ResIII	PF04851.15	9.8e-07	1	1
ENSCVAP00000026067	ResIII	PF04851.15	1.2e-06	1	1
ENSCVAP00000009403	DEAD	PF00270.29	1.1e-48	1	1
ENSCVAP00000026067	DEAD	PF00270.29	1.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015793	-	2676	XM_015374822	ENSCVAP00000026067	891 (aa)	XP_015230308	-
ENSCVAT00000015806	-	3391	XM_015374821	ENSCVAP00000009403	901 (aa)	XP_015230307	UPI0007428A28

Gene Model

Click here to download ENSCVAG00000011404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011404	ddx42	50	37.370	ENSCVAG00000011003	-	68	37.190
ENSCVAG00000011404	ddx42	64	41.297	ENSCVAG00000022900	ddx46	57	42.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011404	ddx42	99	70.961	ENSG00000198231	DDX42	98	77.318	Homo_sapiens
ENSCVAG00000011404	ddx42	91	90.000	ENSAPOG00000017675	ddx42	97	87.949	Acanthochromis_polyacanthus
ENSCVAG00000011404	ddx42	99	71.868	ENSAMEG00000003200	DDX42	100	70.339	Ailuropoda_melanoleuca
ENSCVAG00000011404	ddx42	85	86.441	ENSACIG00000007376	ddx42	100	88.396	Amphilophus_citrinellus
ENSCVAG00000011404	ddx42	100	85.931	ENSAOCG00000003520	ddx42	100	87.839	Amphiprion_ocellaris
ENSCVAG00000011404	ddx42	100	85.963	ENSAPEG00000000984	ddx42	100	87.350	Amphiprion_percula
ENSCVAG00000011404	ddx42	100	88.280	ENSATEG00000022920	ddx42	100	86.199	Anabas_testudineus
ENSCVAG00000011404	ddx42	99	70.308	ENSAPLG00000010544	DDX42	99	70.632	Anas_platyrhynchos
ENSCVAG00000011404	ddx42	99	71.291	ENSACAG00000003994	DDX42	99	70.117	Anolis_carolinensis
ENSCVAG00000011404	ddx42	99	71.778	ENSANAG00000035693	DDX42	99	76.305	Aotus_nancymaae
ENSCVAG00000011404	ddx42	100	86.937	ENSACLG00000025113	ddx42	100	87.157	Astatotilapia_calliptera
ENSCVAG00000011404	ddx42	88	79.657	ENSAMXG00000011435	ddx42	100	76.495	Astyanax_mexicanus
ENSCVAG00000011404	ddx42	99	70.383	ENSBTAG00000021058	DDX42	91	79.969	Bos_taurus
ENSCVAG00000011404	ddx42	68	52.221	WBGene00008119	C46F11.4	78	53.991	Caenorhabditis_elegans
ENSCVAG00000011404	ddx42	99	71.885	ENSCJAG00000019649	DDX42	97	80.667	Callithrix_jacchus
ENSCVAG00000011404	ddx42	99	71.534	ENSCAFG00000012818	DDX42	100	70.394	Canis_familiaris
ENSCVAG00000011404	ddx42	99	71.534	ENSCAFG00020026631	DDX42	100	70.394	Canis_lupus_dingo
ENSCVAG00000011404	ddx42	99	72.216	ENSCHIG00000014431	DDX42	100	71.044	Capra_hircus
ENSCVAG00000011404	ddx42	100	70.507	ENSTSYG00000001380	DDX42	100	69.649	Carlito_syrichta
ENSCVAG00000011404	ddx42	74	60.561	ENSCAPG00000013621	DDX42	94	60.530	Cavia_aperea
ENSCVAG00000011404	ddx42	99	71.932	ENSCPOG00000005633	DDX42	100	70.450	Cavia_porcellus
ENSCVAG00000011404	ddx42	99	67.424	ENSCCAG00000020612	DDX42	97	77.155	Cebus_capucinus
ENSCVAG00000011404	ddx42	99	72.009	ENSCATG00000030490	DDX42	100	70.213	Cercocebus_atys
ENSCVAG00000011404	ddx42	99	72.175	ENSCLAG00000003497	DDX42	100	70.940	Chinchilla_lanigera
ENSCVAG00000011404	ddx42	99	67.823	ENSCSAG00000003914	DDX42	100	66.737	Chlorocebus_sabaeus
ENSCVAG00000011404	ddx42	64	83.036	ENSCHOG00000006241	DDX42	61	84.404	Choloepus_hoffmanni
ENSCVAG00000011404	ddx42	99	72.211	ENSCPBG00000026682	DDX42	99	70.105	Chrysemys_picta_bellii
ENSCVAG00000011404	ddx42	50	65.625	ENSCING00000001837	-	94	67.442	Ciona_intestinalis
ENSCVAG00000011404	ddx42	99	72.009	ENSCANG00000034663	DDX42	94	80.303	Colobus_angolensis_palliatus
ENSCVAG00000011404	ddx42	99	72.175	ENSCGRG00001009775	Ddx42	100	70.469	Cricetulus_griseus_chok1gshd
ENSCVAG00000011404	ddx42	99	72.175	ENSCGRG00000011718	Ddx42	100	70.469	Cricetulus_griseus_crigri
ENSCVAG00000011404	ddx42	100	84.995	ENSCSEG00000021574	ddx42	100	84.337	Cynoglossus_semilaevis
ENSCVAG00000011404	ddx42	100	77.826	ENSDARG00000037928	ddx42	100	77.336	Danio_rerio
ENSCVAG00000011404	ddx42	99	68.790	ENSDNOG00000007961	DDX42	100	68.201	Dasypus_novemcinctus
ENSCVAG00000011404	ddx42	99	64.612	ENSDORG00000004199	Ddx42	100	64.385	Dipodomys_ordii
ENSCVAG00000011404	ddx42	67	60.552	FBgn0036104	CG6418	84	58.045	Drosophila_melanogaster
ENSCVAG00000011404	ddx42	85	71.483	ENSEBUG00000001155	ddx42	93	71.228	Eptatretus_burgeri
ENSCVAG00000011404	ddx42	99	71.172	ENSEASG00005013089	DDX42	99	77.240	Equus_asinus_asinus
ENSCVAG00000011404	ddx42	99	71.278	ENSECAG00000022684	DDX42	100	70.244	Equus_caballus
ENSCVAG00000011404	ddx42	60	84.221	ENSEEUG00000009144	DDX42	73	88.235	Erinaceus_europaeus
ENSCVAG00000011404	ddx42	100	79.336	ENSELUG00000020593	ddx42	100	78.088	Esox_lucius
ENSCVAG00000011404	ddx42	99	70.644	ENSFCAG00000003499	DDX42	99	70.394	Felis_catus
ENSCVAG00000011404	ddx42	98	68.177	ENSFALG00000004675	DDX42	72	76.420	Ficedula_albicollis
ENSCVAG00000011404	ddx42	99	71.962	ENSFDAG00000020516	DDX42	99	70.758	Fukomys_damarensis
ENSCVAG00000011404	ddx42	100	93.584	ENSFHEG00000023290	ddx42	100	93.695	Fundulus_heteroclitus
ENSCVAG00000011404	ddx42	78	82.603	ENSGMOG00000004595	ddx42	79	82.037	Gadus_morhua
ENSCVAG00000011404	ddx42	99	70.421	ENSGALG00000000581	DDX42	99	70.000	Gallus_gallus
ENSCVAG00000011404	ddx42	95	93.326	ENSGAFG00000011846	ddx42	95	93.326	Gambusia_affinis
ENSCVAG00000011404	ddx42	100	81.469	ENSGACG00000009782	ddx42	100	78.509	Gasterosteus_aculeatus
ENSCVAG00000011404	ddx42	99	71.941	ENSGAGG00000024411	DDX42	99	69.863	Gopherus_agassizii
ENSCVAG00000011404	ddx42	99	72.145	ENSGGOG00000006779	DDX42	97	77.188	Gorilla_gorilla
ENSCVAG00000011404	ddx42	100	86.828	ENSHBUG00000008705	ddx42	100	87.047	Haplochromis_burtoni
ENSCVAG00000011404	ddx42	99	68.124	ENSHGLG00000010024	DDX42	99	67.167	Heterocephalus_glaber_female
ENSCVAG00000011404	ddx42	90	55.746	ENSHGLG00100007138	-	84	57.383	Heterocephalus_glaber_male
ENSCVAG00000011404	ddx42	99	71.050	ENSHGLG00100004479	-	99	70.075	Heterocephalus_glaber_male
ENSCVAG00000011404	ddx42	100	76.444	ENSHCOG00000003357	ddx42	100	77.111	Hippocampus_comes
ENSCVAG00000011404	ddx42	100	77.283	ENSIPUG00000013327	ddx42	100	77.322	Ictalurus_punctatus
ENSCVAG00000011404	ddx42	99	71.459	ENSSTOG00000008922	DDX42	99	69.799	Ictidomys_tridecemlineatus
ENSCVAG00000011404	ddx42	99	71.798	ENSJJAG00000011727	Ddx42	100	70.874	Jaculus_jaculus
ENSCVAG00000011404	ddx42	100	88.280	ENSKMAG00000009914	ddx42	100	88.280	Kryptolebias_marmoratus
ENSCVAG00000011404	ddx42	100	77.083	ENSLBEG00000004687	ddx42	100	78.352	Labrus_bergylta
ENSCVAG00000011404	ddx42	99	72.354	ENSLACG00000013476	DDX42	97	73.115	Latimeria_chalumnae
ENSCVAG00000011404	ddx42	100	79.217	ENSLOCG00000011764	ddx42	100	78.455	Lepisosteus_oculatus
ENSCVAG00000011404	ddx42	100	71.078	ENSLAFG00000003249	DDX42	100	71.199	Loxodonta_africana
ENSCVAG00000011404	ddx42	99	71.459	ENSMFAG00000031356	DDX42	100	70.601	Macaca_fascicularis
ENSCVAG00000011404	ddx42	99	72.240	ENSMMUG00000016762	DDX42	91	79.310	Macaca_mulatta
ENSCVAG00000011404	ddx42	99	71.459	ENSMNEG00000038250	DDX42	100	70.601	Macaca_nemestrina
ENSCVAG00000011404	ddx42	99	70.930	ENSMLEG00000043080	DDX42	100	69.841	Mandrillus_leucophaeus
ENSCVAG00000011404	ddx42	91	89.117	ENSMAMG00000021888	ddx42	98	86.580	Mastacembelus_armatus
ENSCVAG00000011404	ddx42	100	86.937	ENSMZEG00005023103	ddx42	100	87.157	Maylandia_zebra
ENSCVAG00000011404	ddx42	99	70.737	ENSMGAG00000001822	DDX42	99	70.148	Meleagris_gallopavo
ENSCVAG00000011404	ddx42	76	77.603	ENSMAUG00000020774	-	93	77.603	Mesocricetus_auratus
ENSCVAG00000011404	ddx42	99	71.277	ENSMICG00000009952	DDX42	100	70.481	Microcebus_murinus
ENSCVAG00000011404	ddx42	99	71.966	ENSMOCG00000015504	Ddx42	99	69.979	Microtus_ochrogaster
ENSCVAG00000011404	ddx42	95	83.986	ENSMMOG00000016963	ddx42	85	84.785	Mola_mola
ENSCVAG00000011404	ddx42	52	83.830	ENSMODG00000009917	-	98	82.340	Monodelphis_domestica
ENSCVAG00000011404	ddx42	100	88.827	ENSMALG00000007800	ddx42	100	87.611	Monopterus_albus
ENSCVAG00000011404	ddx42	99	71.505	MGP_CAROLIEiJ_G0017314	Ddx42	99	70.117	Mus_caroli
ENSCVAG00000011404	ddx42	99	71.612	ENSMUSG00000020705	Ddx42	99	70.224	Mus_musculus
ENSCVAG00000011404	ddx42	75	84.412	MGP_PahariEiJ_G0018444	-	95	83.905	Mus_pahari
ENSCVAG00000011404	ddx42	99	71.612	MGP_SPRETEiJ_G0018158	Ddx42	99	70.224	Mus_spretus
ENSCVAG00000011404	ddx42	99	71.278	ENSMPUG00000014921	DDX42	100	69.662	Mustela_putorius_furo
ENSCVAG00000011404	ddx42	99	69.465	ENSMLUG00000011645	DDX42	99	68.290	Myotis_lucifugus
ENSCVAG00000011404	ddx42	99	72.454	ENSNGAG00000021897	Ddx42	99	71.259	Nannospalax_galili
ENSCVAG00000011404	ddx42	100	85.259	ENSNBRG00000004466	ddx42	100	85.479	Neolamprologus_brichardi
ENSCVAG00000011404	ddx42	99	72.193	ENSNLEG00000004248	DDX42	99	77.044	Nomascus_leucogenys
ENSCVAG00000011404	ddx42	77	70.619	ENSMEUG00000013227	-	71	70.619	Notamacropus_eugenii
ENSCVAG00000011404	ddx42	99	70.402	ENSOPRG00000014960	DDX42	100	70.032	Ochotona_princeps
ENSCVAG00000011404	ddx42	99	68.830	ENSODEG00000007810	DDX42	100	67.735	Octodon_degus
ENSCVAG00000011404	ddx42	100	86.389	ENSONIG00000000734	ddx42	100	86.937	Oreochromis_niloticus
ENSCVAG00000011404	ddx42	60	82.593	ENSOANG00000000265	DDX42	100	82.593	Ornithorhynchus_anatinus
ENSCVAG00000011404	ddx42	95	72.575	ENSOCUG00000004304	DDX42	82	74.289	Oryctolagus_cuniculus
ENSCVAG00000011404	ddx42	100	86.880	ENSORLG00000002395	ddx42	98	88.093	Oryzias_latipes
ENSCVAG00000011404	ddx42	100	88.656	ENSORLG00020011621	ddx42	100	87.445	Oryzias_latipes_hni
ENSCVAG00000011404	ddx42	100	88.656	ENSORLG00015004487	ddx42	100	87.445	Oryzias_latipes_hsok
ENSCVAG00000011404	ddx42	100	88.009	ENSOMEG00000020093	ddx42	100	87.569	Oryzias_melastigma
ENSCVAG00000011404	ddx42	99	70.975	ENSOGAG00000006872	DDX42	100	70.095	Otolemur_garnettii
ENSCVAG00000011404	ddx42	99	70.798	ENSOARG00000013540	DDX42	100	69.706	Ovis_aries
ENSCVAG00000011404	ddx42	99	72.038	ENSPPAG00000007496	DDX42	97	77.056	Pan_paniscus
ENSCVAG00000011404	ddx42	99	70.750	ENSPPRG00000002740	DDX42	99	70.501	Panthera_pardus
ENSCVAG00000011404	ddx42	99	70.807	ENSPTIG00000009932	DDX42	100	70.426	Panthera_tigris_altaica
ENSCVAG00000011404	ddx42	99	72.038	ENSPTRG00000009523	DDX42	97	77.056	Pan_troglodytes
ENSCVAG00000011404	ddx42	99	72.115	ENSPANG00000020990	DDX42	100	70.213	Papio_anubis
ENSCVAG00000011404	ddx42	100	77.008	ENSPKIG00000002901	ddx42	100	75.515	Paramormyrops_kingsleyae
ENSCVAG00000011404	ddx42	86	78.780	ENSPSIG00000010289	DDX42	95	77.764	Pelodiscus_sinensis
ENSCVAG00000011404	ddx42	91	83.902	ENSPMGG00000009323	ddx42	100	79.669	Periophthalmus_magnuspinnatus
ENSCVAG00000011404	ddx42	99	71.855	ENSPEMG00000006755	Ddx42	100	70.276	Peromyscus_maniculatus_bairdii
ENSCVAG00000011404	ddx42	86	71.154	ENSPMAG00000005580	ddx42	99	70.256	Petromyzon_marinus
ENSCVAG00000011404	ddx42	99	71.819	ENSPCIG00000009093	DDX42	100	70.116	Phascolarctos_cinereus
ENSCVAG00000011404	ddx42	100	90.723	ENSPFOG00000014104	ddx42	100	91.459	Poecilia_formosa
ENSCVAG00000011404	ddx42	100	90.507	ENSPLAG00000010522	ddx42	100	91.243	Poecilia_latipinna
ENSCVAG00000011404	ddx42	100	90.354	ENSPMEG00000010744	ddx42	100	90.675	Poecilia_mexicana
ENSCVAG00000011404	ddx42	100	89.586	ENSPREG00000009926	ddx42	100	90.117	Poecilia_reticulata
ENSCVAG00000011404	ddx42	99	68.737	ENSPPYG00000008531	DDX42	99	67.861	Pongo_abelii
ENSCVAG00000011404	ddx42	92	66.399	ENSPCAG00000002474	DDX42	100	65.318	Procavia_capensis
ENSCVAG00000011404	ddx42	99	63.910	ENSPCOG00000001559	DDX42	92	72.826	Propithecus_coquereli
ENSCVAG00000011404	ddx42	99	69.288	ENSPVAG00000000160	DDX42	100	67.732	Pteropus_vampyrus
ENSCVAG00000011404	ddx42	86	85.566	ENSPNYG00000013954	ddx42	97	86.441	Pundamilia_nyererei
ENSCVAG00000011404	ddx42	88	81.068	ENSPNAG00000017352	ddx42	100	77.579	Pygocentrus_nattereri
ENSCVAG00000011404	ddx42	99	71.612	ENSRNOG00000009474	Ddx42	99	70.588	Rattus_norvegicus
ENSCVAG00000011404	ddx42	99	72.009	ENSRBIG00000004781	DDX42	94	80.303	Rhinopithecus_bieti
ENSCVAG00000011404	ddx42	99	72.009	ENSRROG00000029794	DDX42	100	70.213	Rhinopithecus_roxellana
ENSCVAG00000011404	ddx42	99	71.902	ENSSBOG00000029624	DDX42	97	77.233	Saimiri_boliviensis_boliviensis
ENSCVAG00000011404	ddx42	71	49.321	ENSSHAG00000007919	-	99	48.421	Sarcophilus_harrisii
ENSCVAG00000011404	ddx42	99	71.819	ENSSHAG00000012896	-	100	70.011	Sarcophilus_harrisii
ENSCVAG00000011404	ddx42	80	87.208	ENSSFOG00015014064	ddx42	80	86.364	Scleropages_formosus
ENSCVAG00000011404	ddx42	100	85.558	ENSSMAG00000009077	ddx42	100	86.267	Scophthalmus_maximus
ENSCVAG00000011404	ddx42	100	88.596	ENSSDUG00000022221	ddx42	100	86.842	Seriola_dumerili
ENSCVAG00000011404	ddx42	100	87.832	ENSSLDG00000018483	ddx42	100	85.841	Seriola_lalandi_dorsalis
ENSCVAG00000011404	ddx42	99	70.426	ENSSARG00000009847	DDX42	100	69.787	Sorex_araneus
ENSCVAG00000011404	ddx42	99	72.785	ENSSPUG00000018806	DDX42	99	71.842	Sphenodon_punctatus
ENSCVAG00000011404	ddx42	100	87.939	ENSSPAG00000013055	ddx42	100	88.816	Stegastes_partitus
ENSCVAG00000011404	ddx42	85	70.854	ENSSSCG00000017289	DDX42	97	70.270	Sus_scrofa
ENSCVAG00000011404	ddx42	99	71.702	ENSTGUG00000001931	DDX42	100	70.288	Taeniopygia_guttata
ENSCVAG00000011404	ddx42	100	83.056	ENSTRUG00000010711	ddx42	99	88.143	Takifugu_rubripes
ENSCVAG00000011404	ddx42	83	77.200	ENSTBEG00000010159	DDX42	98	76.267	Tupaia_belangeri
ENSCVAG00000011404	ddx42	100	71.217	ENSTTRG00000006962	DDX42	100	70.426	Tursiops_truncatus
ENSCVAG00000011404	ddx42	99	71.156	ENSUAMG00000007321	DDX42	100	70.445	Ursus_americanus
ENSCVAG00000011404	ddx42	99	71.002	ENSUMAG00000017438	DDX42	100	70.319	Ursus_maritimus
ENSCVAG00000011404	ddx42	92	74.603	ENSVPAG00000009633	DDX42	94	70.000	Vicugna_pacos
ENSCVAG00000011404	ddx42	99	71.534	ENSVVUG00000006095	DDX42	100	70.501	Vulpes_vulpes
ENSCVAG00000011404	ddx42	100	70.992	ENSXETG00000003245	ddx42	100	69.937	Xenopus_tropicalis
ENSCVAG00000011404	ddx42	86	94.882	ENSXCOG00000017560	ddx42	97	95.000	Xiphophorus_couchianus
ENSCVAG00000011404	ddx42	100	94.784	ENSXMAG00000008138	ddx42	100	94.118	Xiphophorus_maculatus