EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 914 bases
Position: chrKL652569.1:640055-640968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026106	RRM_1	PF00076.22	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015884	-	348	-	ENSCVAP00000026106	115 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000011435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011435	-	89	59.804	ENSCVAG00000011461	-	85	59.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011435	-	70	65.000	ENSGAFG00000006965	-	79	65.000	Gambusia_affinis
ENSCVAG00000011435	-	91	61.905	ENSGAFG00000006970	-	94	61.765	Gambusia_affinis
ENSCVAG00000011435	-	93	63.551	ENSPFOG00000021959	-	80	63.551	Poecilia_formosa
ENSCVAG00000011435	-	95	57.522	ENSPFOG00000022708	-	84	57.522	Poecilia_formosa
ENSCVAG00000011435	-	91	64.762	ENSPLAG00000023759	-	83	64.762	Poecilia_latipinna
ENSCVAG00000011435	-	90	63.107	ENSPLAG00000013538	-	86	61.765	Poecilia_latipinna
ENSCVAG00000011435	-	97	63.063	ENSPMEG00000014948	-	79	63.063	Poecilia_mexicana
ENSCVAG00000011435	-	91	64.762	ENSPMEG00000014957	-	67	64.762	Poecilia_mexicana
ENSCVAG00000011435	-	88	59.406	ENSPREG00000002361	-	96	59.406	Poecilia_reticulata
ENSCVAG00000011435	-	92	65.094	ENSPREG00000002388	-	68	65.094	Poecilia_reticulata
ENSCVAG00000011435	-	89	60.784	ENSXCOG00000010506	-	86	60.784	Xiphophorus_couchianus
ENSCVAG00000011435	-	95	58.716	ENSXCOG00000015682	-	88	58.716	Xiphophorus_couchianus
ENSCVAG00000011435	-	89	60.784	ENSXMAG00000027824	-	86	60.784	Xiphophorus_maculatus
ENSCVAG00000011435	-	90	62.500	ENSXMAG00000026326	-	76	62.500	Xiphophorus_maculatus
ENSCVAG00000011435	-	98	60.000	ENSXMAG00000022455	-	74	60.000	Xiphophorus_maculatus
ENSCVAG00000011435	-	90	62.500	ENSXMAG00000022673	-	76	62.500	Xiphophorus_maculatus
ENSCVAG00000011435	-	97	56.522	ENSXMAG00000027771	-	99	61.386	Xiphophorus_maculatus