EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011461 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 732 bases
Position: chrKL652569.1:633425-634156
Accession: 107083171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009481	RRM_1	PF00076.22	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015907	-	345	XM_015372171	ENSCVAP00000009481	114 (aa)	XP_015227657	-

Gene Model

Click here to download ENSCVAG00000011461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011461	-	85	59.804	ENSCVAG00000011435	-	89	59.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011461	-	82	43.434	ENSACIG00000013907	-	91	43.434	Amphilophus_citrinellus
ENSCVAG00000011461	-	89	50.000	ENSAOCG00000013396	-	80	50.000	Amphiprion_ocellaris
ENSCVAG00000011461	-	86	51.402	ENSAPEG00000003539	-	79	51.402	Amphiprion_percula
ENSCVAG00000011461	-	96	48.276	ENSATEG00000024207	-	92	48.276	Anabas_testudineus
ENSCVAG00000011461	-	92	44.144	ENSACLG00000025617	-	74	44.144	Astatotilapia_calliptera
ENSCVAG00000011461	-	82	35.354	ENSDARG00000102450	CU571328.1	77	35.354	Danio_rerio
ENSCVAG00000011461	-	89	48.182	ENSELUG00000014190	RO21	92	48.182	Esox_lucius
ENSCVAG00000011461	-	90	48.624	ENSGMOG00000000626	-	97	48.624	Gadus_morhua
ENSCVAG00000011461	-	92	45.045	ENSHBUG00000002750	-	74	45.045	Haplochromis_burtoni
ENSCVAG00000011461	-	90	52.336	ENSLBEG00000023432	-	94	52.336	Labrus_bergylta
ENSCVAG00000011461	-	92	44.144	ENSMZEG00005013064	-	74	44.144	Maylandia_zebra
ENSCVAG00000011461	-	92	53.636	ENSMMOG00000010899	-	91	53.636	Mola_mola
ENSCVAG00000011461	-	97	40.171	ENSNBRG00000023103	-	81	40.171	Neolamprologus_brichardi
ENSCVAG00000011461	-	91	41.818	ENSONIG00000005302	-	85	41.818	Oreochromis_niloticus
ENSCVAG00000011461	-	82	36.000	ENSORLG00000026996	-	60	36.000	Oryzias_latipes
ENSCVAG00000011461	-	82	38.000	ENSORLG00020020545	-	61	38.000	Oryzias_latipes_hni
ENSCVAG00000011461	-	73	37.931	ENSORLG00015010118	-	56	37.931	Oryzias_latipes_hsok
ENSCVAG00000011461	-	88	40.566	ENSOMEG00000008826	-	65	40.566	Oryzias_melastigma
ENSCVAG00000011461	-	88	52.941	ENSPMGG00000003488	-	91	52.941	Periophthalmus_magnuspinnatus
ENSCVAG00000011461	-	92	44.144	ENSPNYG00000019872	-	74	44.144	Pundamilia_nyererei
ENSCVAG00000011461	-	86	53.333	ENSSMAG00000017418	-	78	53.333	Scophthalmus_maximus
ENSCVAG00000011461	-	90	55.140	ENSSDUG00000011905	-	78	55.140	Seriola_dumerili
ENSCVAG00000011461	-	96	53.509	ENSSLDG00000021809	-	78	53.509	Seriola_lalandi_dorsalis
ENSCVAG00000011461	-	85	51.456	ENSSPAG00000004304	-	96	51.456	Stegastes_partitus
ENSCVAG00000011461	-	93	45.946	ENSTRUG00000023389	-	96	45.946	Takifugu_rubripes