EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011501 (Gene tree)
Gene ID: 107088198
Gene Symbol: bicc2
Alias: bicc1a
Full Name: protein bicaudal C homolog 1-B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15409 bases
Position: chrKL652710.1:293737-309145
Accession: 107088198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026151	KH_1	PF00013.29	3.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015951	-	2950	XM_015380219	ENSCVAP00000026151	883 (aa)	XP_015235705	UPI0007428FE4

Gene Model

Click here to download ENSCVAG00000011501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011501	bicc2	79	52.124	ENSCVAG00000015896	bicc1a	67	53.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011501	bicc2	99	76.974	ENSAPOG00000019115	bicc2	99	76.752	Acanthochromis_polyacanthus
ENSCVAG00000011501	bicc2	87	84.158	ENSAOCG00000021728	bicc2	97	71.209	Amphiprion_ocellaris
ENSCVAG00000011501	bicc2	92	83.168	ENSAPEG00000015354	bicc2	99	69.344	Amphiprion_percula
ENSCVAG00000011501	bicc2	86	79.070	ENSATEG00000009479	bicc2	94	79.693	Anabas_testudineus
ENSCVAG00000011501	bicc2	91	75.937	ENSACLG00000010291	bicc2	100	75.816	Astatotilapia_calliptera
ENSCVAG00000011501	bicc2	94	59.696	ENSAMXG00000017167	bicc2	86	74.747	Astyanax_mexicanus
ENSCVAG00000011501	bicc2	99	69.912	ENSCSEG00000006475	bicc2	99	69.584	Cynoglossus_semilaevis
ENSCVAG00000011501	bicc2	93	58.178	ENSDARG00000076557	bicc2	96	58.180	Danio_rerio
ENSCVAG00000011501	bicc2	94	63.330	ENSELUG00000018740	bicc2	91	63.780	Esox_lucius
ENSCVAG00000011501	bicc2	87	68.852	ENSFHEG00000022640	bicc2	97	66.393	Fundulus_heteroclitus
ENSCVAG00000011501	bicc2	94	60.120	ENSGMOG00000009682	bicc2	94	59.760	Gadus_morhua
ENSCVAG00000011501	bicc2	97	76.566	ENSGAFG00000009167	bicc2	96	77.006	Gambusia_affinis
ENSCVAG00000011501	bicc2	95	70.286	ENSGACG00000017939	bicc2	95	69.679	Gasterosteus_aculeatus
ENSCVAG00000011501	bicc2	99	72.997	ENSHBUG00000009003	bicc2	99	72.857	Haplochromis_burtoni
ENSCVAG00000011501	bicc2	80	72.881	ENSHCOG00000014603	bicc2	89	76.238	Hippocampus_comes
ENSCVAG00000011501	bicc2	93	59.191	ENSIPUG00000008968	bicc2	93	59.404	Ictalurus_punctatus
ENSCVAG00000011501	bicc2	71	78.413	ENSKMAG00000009505	bicc2	91	78.413	Kryptolebias_marmoratus
ENSCVAG00000011501	bicc2	94	70.084	ENSLBEG00000001155	bicc2	96	68.802	Labrus_bergylta
ENSCVAG00000011501	bicc2	58	67.033	ENSLACG00000013687	-	64	67.033	Latimeria_chalumnae
ENSCVAG00000011501	bicc2	95	57.661	ENSLOCG00000011365	bicc2	94	58.184	Lepisosteus_oculatus
ENSCVAG00000011501	bicc2	87	76.000	ENSMAMG00000006344	bicc2	92	76.000	Mastacembelus_armatus
ENSCVAG00000011501	bicc2	72	84.615	ENSMZEG00005000357	bicc2	97	70.783	Maylandia_zebra
ENSCVAG00000011501	bicc2	78	78.271	ENSMMOG00000002840	bicc2	98	78.271	Mola_mola
ENSCVAG00000011501	bicc2	99	70.655	ENSMALG00000011735	bicc2	99	70.562	Monopterus_albus
ENSCVAG00000011501	bicc2	94	75.083	ENSONIG00000004936	bicc2	99	76.005	Oreochromis_niloticus
ENSCVAG00000011501	bicc2	99	71.126	ENSORLG00000004346	bicc2	99	71.014	Oryzias_latipes
ENSCVAG00000011501	bicc2	86	75.000	ENSORLG00020014233	bicc2	88	76.827	Oryzias_latipes_hni
ENSCVAG00000011501	bicc2	99	71.858	ENSORLG00015021684	bicc2	99	71.635	Oryzias_latipes_hsok
ENSCVAG00000011501	bicc2	99	71.061	ENSOMEG00000004070	bicc2	99	70.726	Oryzias_melastigma
ENSCVAG00000011501	bicc2	94	58.314	ENSPKIG00000015555	bicc2	93	57.601	Paramormyrops_kingsleyae
ENSCVAG00000011501	bicc2	83	73.361	ENSPMGG00000021752	bicc2	91	73.597	Periophthalmus_magnuspinnatus
ENSCVAG00000011501	bicc2	98	72.452	ENSPFOG00000000640	bicc2	100	72.452	Poecilia_formosa
ENSCVAG00000011501	bicc2	86	85.221	ENSPLAG00000011230	bicc2	99	85.221	Poecilia_latipinna
ENSCVAG00000011501	bicc2	77	87.982	ENSPMEG00000003438	bicc2	99	87.982	Poecilia_mexicana
ENSCVAG00000011501	bicc2	100	81.899	ENSPREG00000001918	bicc2	100	82.011	Poecilia_reticulata
ENSCVAG00000011501	bicc2	72	84.615	ENSPNYG00000001673	bicc2	97	70.435	Pundamilia_nyererei
ENSCVAG00000011501	bicc2	59	76.543	ENSPNAG00000011311	bicc2	71	76.543	Pygocentrus_nattereri
ENSCVAG00000011501	bicc2	98	48.866	ENSSFOG00015003080	bicc2	88	56.414	Scleropages_formosus
ENSCVAG00000011501	bicc2	99	70.530	ENSSMAG00000001751	bicc2	98	70.530	Scophthalmus_maximus
ENSCVAG00000011501	bicc2	87	84.158	ENSSDUG00000002631	bicc2	95	71.685	Seriola_dumerili
ENSCVAG00000011501	bicc2	99	74.834	ENSSLDG00000001984	bicc2	99	74.834	Seriola_lalandi_dorsalis
ENSCVAG00000011501	bicc2	99	67.271	ENSSPAG00000016923	bicc2	98	67.157	Stegastes_partitus
ENSCVAG00000011501	bicc2	86	69.582	ENSTRUG00000010821	bicc2	90	74.004	Takifugu_rubripes
ENSCVAG00000011501	bicc2	94	68.182	ENSTNIG00000014205	bicc2	95	68.810	Tetraodon_nigroviridis
ENSCVAG00000011501	bicc2	59	85.932	ENSXCOG00000002192	bicc2	99	85.932	Xiphophorus_couchianus
ENSCVAG00000011501	bicc2	100	81.585	ENSXMAG00000013618	bicc2	100	82.031	Xiphophorus_maculatus