EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000011536 (Gene tree)
Gene ID: 107088687
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11788 bases
Position: chrKL652727.1:998718-1010505
Accession: 107088687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000009539	RTC	PF01137.21	2.7e-58	1	1
ENSCVAP00000009539	RTC_insert	PF05189.13	7.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029195	-	2501	XM_015381007	ENSCVAP00000009539	372 (aa)	XP_015236493	UPI0007424F74

Gene Model

Click here to download ENSCVAG00000011536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011536	rcl1	99	80.541	ENSG00000120158	RCL1	100	82.407	Homo_sapiens
ENSCVAG00000011536	rcl1	100	91.129	ENSAPOG00000015666	rcl1	100	91.129	Acanthochromis_polyacanthus
ENSCVAG00000011536	rcl1	99	81.622	ENSAMEG00000002631	RCL1	99	81.622	Ailuropoda_melanoleuca
ENSCVAG00000011536	rcl1	100	91.935	ENSACIG00000021195	rcl1	100	91.935	Amphilophus_citrinellus
ENSCVAG00000011536	rcl1	100	90.591	ENSAOCG00000002223	rcl1	100	90.591	Amphiprion_ocellaris
ENSCVAG00000011536	rcl1	100	91.129	ENSAPEG00000006905	rcl1	100	91.129	Amphiprion_percula
ENSCVAG00000011536	rcl1	100	88.978	ENSATEG00000020026	rcl1	100	88.978	Anabas_testudineus
ENSCVAG00000011536	rcl1	88	77.204	ENSAPLG00000006031	RCL1	100	77.204	Anas_platyrhynchos
ENSCVAG00000011536	rcl1	99	75.135	ENSACAG00000003640	RCL1	99	75.135	Anolis_carolinensis
ENSCVAG00000011536	rcl1	99	80.000	ENSANAG00000037372	RCL1	99	80.000	Aotus_nancymaae
ENSCVAG00000011536	rcl1	100	91.667	ENSACLG00000021724	rcl1	100	91.667	Astatotilapia_calliptera
ENSCVAG00000011536	rcl1	99	83.696	ENSAMXG00000033394	rcl1	99	83.696	Astyanax_mexicanus
ENSCVAG00000011536	rcl1	99	46.825	WBGene00022852	ZK1127.5	99	46.825	Caenorhabditis_elegans
ENSCVAG00000011536	rcl1	99	80.270	ENSCJAG00000011202	RCL1	99	80.270	Callithrix_jacchus
ENSCVAG00000011536	rcl1	99	81.622	ENSCAFG00000002091	RCL1	99	81.622	Canis_familiaris
ENSCVAG00000011536	rcl1	99	81.622	ENSCAFG00020000638	RCL1	77	81.622	Canis_lupus_dingo
ENSCVAG00000011536	rcl1	99	80.270	ENSCHIG00000012407	RCL1	99	80.270	Capra_hircus
ENSCVAG00000011536	rcl1	88	82.012	ENSTSYG00000009592	RCL1	97	83.516	Carlito_syrichta
ENSCVAG00000011536	rcl1	66	69.136	ENSCAPG00000013575	RCL1	100	69.136	Cavia_aperea
ENSCVAG00000011536	rcl1	99	80.270	ENSCPOG00000015354	RCL1	99	80.270	Cavia_porcellus
ENSCVAG00000011536	rcl1	99	80.270	ENSCCAG00000033505	RCL1	99	80.270	Cebus_capucinus
ENSCVAG00000011536	rcl1	99	80.541	ENSCATG00000034721	RCL1	99	80.541	Cercocebus_atys
ENSCVAG00000011536	rcl1	99	80.541	ENSCLAG00000007445	RCL1	99	80.541	Chinchilla_lanigera
ENSCVAG00000011536	rcl1	99	80.270	ENSCSAG00000008811	RCL1	99	80.270	Chlorocebus_sabaeus
ENSCVAG00000011536	rcl1	86	69.906	ENSCHOG00000007216	RCL1	99	69.906	Choloepus_hoffmanni
ENSCVAG00000011536	rcl1	100	77.005	ENSCPBG00000025481	RCL1	94	78.182	Chrysemys_picta_bellii
ENSCVAG00000011536	rcl1	99	59.459	ENSCING00000019565	-	98	59.459	Ciona_intestinalis
ENSCVAG00000011536	rcl1	99	80.270	ENSCANG00000027099	RCL1	99	80.270	Colobus_angolensis_palliatus
ENSCVAG00000011536	rcl1	99	80.811	ENSCGRG00001013748	Rcl1	99	80.811	Cricetulus_griseus_chok1gshd
ENSCVAG00000011536	rcl1	88	81.763	ENSCGRG00000005843	Rcl1	99	81.763	Cricetulus_griseus_crigri
ENSCVAG00000011536	rcl1	100	88.978	ENSCSEG00000000712	rcl1	98	88.978	Cynoglossus_semilaevis
ENSCVAG00000011536	rcl1	99	81.744	ENSDARG00000038312	rcl1	100	81.744	Danio_rerio
ENSCVAG00000011536	rcl1	72	81.579	ENSDNOG00000019911	RCL1	100	82.870	Dasypus_novemcinctus
ENSCVAG00000011536	rcl1	99	81.081	ENSDORG00000015645	Rcl1	99	81.081	Dipodomys_ordii
ENSCVAG00000011536	rcl1	98	54.424	FBgn0020909	Rtc1	97	55.228	Drosophila_melanogaster
ENSCVAG00000011536	rcl1	88	55.793	ENSETEG00000014087	-	82	95.652	Echinops_telfairi
ENSCVAG00000011536	rcl1	100	55.496	ENSEBUG00000016621	-	99	55.496	Eptatretus_burgeri
ENSCVAG00000011536	rcl1	99	80.000	ENSEASG00005010653	RCL1	99	80.000	Equus_asinus_asinus
ENSCVAG00000011536	rcl1	99	80.000	ENSECAG00000015973	RCL1	99	80.000	Equus_caballus
ENSCVAG00000011536	rcl1	99	68.378	ENSEEUG00000009801	RCL1	99	68.378	Erinaceus_europaeus
ENSCVAG00000011536	rcl1	100	80.914	ENSELUG00000007353	rcl1	100	80.914	Esox_lucius
ENSCVAG00000011536	rcl1	99	80.541	ENSFCAG00000014557	RCL1	99	80.541	Felis_catus
ENSCVAG00000011536	rcl1	100	71.774	ENSFALG00000010553	RCL1	98	71.774	Ficedula_albicollis
ENSCVAG00000011536	rcl1	88	79.573	ENSFDAG00000004209	RCL1	100	79.573	Fukomys_damarensis
ENSCVAG00000011536	rcl1	100	94.624	ENSFHEG00000011228	rcl1	100	94.624	Fundulus_heteroclitus
ENSCVAG00000011536	rcl1	100	83.602	ENSGMOG00000004677	rcl1	100	83.602	Gadus_morhua
ENSCVAG00000011536	rcl1	99	76.011	ENSGALG00000015024	RCL1	99	76.011	Gallus_gallus
ENSCVAG00000011536	rcl1	100	94.624	ENSGAFG00000007257	rcl1	100	94.624	Gambusia_affinis
ENSCVAG00000011536	rcl1	100	88.710	ENSGACG00000017474	rcl1	100	88.710	Gasterosteus_aculeatus
ENSCVAG00000011536	rcl1	100	76.738	ENSGAGG00000003689	RCL1	100	76.738	Gopherus_agassizii
ENSCVAG00000011536	rcl1	99	80.000	ENSGGOG00000015041	RCL1	99	80.000	Gorilla_gorilla
ENSCVAG00000011536	rcl1	100	91.935	ENSHBUG00000001393	rcl1	100	91.935	Haplochromis_burtoni
ENSCVAG00000011536	rcl1	99	80.000	ENSHGLG00000016452	RCL1	99	80.000	Heterocephalus_glaber_female
ENSCVAG00000011536	rcl1	99	66.938	ENSHGLG00000005368	-	99	66.938	Heterocephalus_glaber_female
ENSCVAG00000011536	rcl1	99	68.022	ENSHGLG00100018010	-	99	68.022	Heterocephalus_glaber_male
ENSCVAG00000011536	rcl1	99	74.595	ENSHGLG00100008718	-	99	74.595	Heterocephalus_glaber_male
ENSCVAG00000011536	rcl1	100	91.129	ENSHCOG00000020170	rcl1	100	91.129	Hippocampus_comes
ENSCVAG00000011536	rcl1	100	85.484	ENSIPUG00000018054	RCL1	100	85.484	Ictalurus_punctatus
ENSCVAG00000011536	rcl1	99	79.459	ENSSTOG00000000023	RCL1	99	79.459	Ictidomys_tridecemlineatus
ENSCVAG00000011536	rcl1	54	62.376	ENSJJAG00000000764	-	98	62.376	Jaculus_jaculus
ENSCVAG00000011536	rcl1	99	70.541	ENSJJAG00000015632	-	99	70.541	Jaculus_jaculus
ENSCVAG00000011536	rcl1	99	80.811	ENSJJAG00000022803	-	99	80.811	Jaculus_jaculus
ENSCVAG00000011536	rcl1	100	91.935	ENSKMAG00000011946	rcl1	100	91.935	Kryptolebias_marmoratus
ENSCVAG00000011536	rcl1	100	86.559	ENSLBEG00000003957	rcl1	100	86.559	Labrus_bergylta
ENSCVAG00000011536	rcl1	93	75.723	ENSLACG00000004594	RCL1	100	80.124	Latimeria_chalumnae
ENSCVAG00000011536	rcl1	100	82.527	ENSLOCG00000010148	rcl1	98	82.527	Lepisosteus_oculatus
ENSCVAG00000011536	rcl1	99	78.919	ENSLAFG00000017495	RCL1	99	78.919	Loxodonta_africana
ENSCVAG00000011536	rcl1	99	80.270	ENSMFAG00000037906	RCL1	99	80.270	Macaca_fascicularis
ENSCVAG00000011536	rcl1	99	80.270	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSCVAG00000011536	rcl1	99	80.270	ENSMLEG00000043088	RCL1	99	80.270	Mandrillus_leucophaeus
ENSCVAG00000011536	rcl1	100	91.935	ENSMAMG00000008311	rcl1	100	91.935	Mastacembelus_armatus
ENSCVAG00000011536	rcl1	100	91.667	ENSMZEG00005017292	rcl1	100	91.667	Maylandia_zebra
ENSCVAG00000011536	rcl1	58	75.909	ENSMGAG00000002245	RCL1	100	75.909	Meleagris_gallopavo
ENSCVAG00000011536	rcl1	58	82.407	ENSMAUG00000008922	Rcl1	100	82.407	Mesocricetus_auratus
ENSCVAG00000011536	rcl1	99	80.759	ENSMICG00000015562	RCL1	99	80.759	Microcebus_murinus
ENSCVAG00000011536	rcl1	99	80.541	ENSMOCG00000012145	Rcl1	99	80.541	Microtus_ochrogaster
ENSCVAG00000011536	rcl1	100	87.936	ENSMMOG00000021264	rcl1	100	87.936	Mola_mola
ENSCVAG00000011536	rcl1	95	79.261	ENSMODG00000015377	RCL1	93	79.261	Monodelphis_domestica
ENSCVAG00000011536	rcl1	100	90.591	ENSMALG00000018618	rcl1	100	90.591	Monopterus_albus
ENSCVAG00000011536	rcl1	99	80.541	MGP_CAROLIEiJ_G0022853	Rcl1	99	80.541	Mus_caroli
ENSCVAG00000011536	rcl1	99	80.000	ENSMUSG00000024785	Rcl1	99	80.000	Mus_musculus
ENSCVAG00000011536	rcl1	99	80.811	MGP_PahariEiJ_G0014346	Rcl1	100	81.871	Mus_pahari
ENSCVAG00000011536	rcl1	99	80.000	MGP_SPRETEiJ_G0023771	Rcl1	100	81.287	Mus_spretus
ENSCVAG00000011536	rcl1	99	81.351	ENSMPUG00000004998	RCL1	99	81.351	Mustela_putorius_furo
ENSCVAG00000011536	rcl1	99	79.189	ENSMLUG00000009654	RCL1	99	79.189	Myotis_lucifugus
ENSCVAG00000011536	rcl1	99	80.541	ENSNGAG00000015327	Rcl1	99	80.541	Nannospalax_galili
ENSCVAG00000011536	rcl1	91	89.614	ENSNBRG00000019854	rcl1	99	84.573	Neolamprologus_brichardi
ENSCVAG00000011536	rcl1	99	77.838	ENSNLEG00000008891	RCL1	99	77.838	Nomascus_leucogenys
ENSCVAG00000011536	rcl1	99	73.243	ENSMEUG00000007653	RCL1	99	73.243	Notamacropus_eugenii
ENSCVAG00000011536	rcl1	99	78.649	ENSOPRG00000010965	RCL1	99	78.649	Ochotona_princeps
ENSCVAG00000011536	rcl1	88	67.781	ENSODEG00000004151	RCL1	96	67.781	Octodon_degus
ENSCVAG00000011536	rcl1	100	92.473	ENSONIG00000003871	rcl1	100	92.473	Oreochromis_niloticus
ENSCVAG00000011536	rcl1	67	78.261	ENSOANG00000013193	-	99	78.261	Ornithorhynchus_anatinus
ENSCVAG00000011536	rcl1	99	80.000	ENSOCUG00000008161	RCL1	99	80.000	Oryctolagus_cuniculus
ENSCVAG00000011536	rcl1	100	87.097	ENSORLG00000010443	rcl1	100	87.097	Oryzias_latipes
ENSCVAG00000011536	rcl1	100	87.366	ENSORLG00020012211	rcl1	100	87.366	Oryzias_latipes_hni
ENSCVAG00000011536	rcl1	100	86.828	ENSORLG00015001122	rcl1	100	86.828	Oryzias_latipes_hsok
ENSCVAG00000011536	rcl1	100	89.785	ENSOMEG00000022976	rcl1	88	89.785	Oryzias_melastigma
ENSCVAG00000011536	rcl1	99	79.730	ENSOGAG00000007480	RCL1	99	79.730	Otolemur_garnettii
ENSCVAG00000011536	rcl1	99	80.270	ENSOARG00000013463	RCL1	99	80.270	Ovis_aries
ENSCVAG00000011536	rcl1	99	80.270	ENSPPAG00000037958	RCL1	99	80.270	Pan_paniscus
ENSCVAG00000011536	rcl1	99	79.730	ENSPPRG00000022645	RCL1	99	79.730	Panthera_pardus
ENSCVAG00000011536	rcl1	88	81.040	ENSPTIG00000019031	RCL1	100	81.481	Panthera_tigris_altaica
ENSCVAG00000011536	rcl1	99	80.000	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSCVAG00000011536	rcl1	99	80.270	ENSPANG00000025151	RCL1	99	80.270	Papio_anubis
ENSCVAG00000011536	rcl1	100	81.720	ENSPKIG00000021022	rcl1	100	81.720	Paramormyrops_kingsleyae
ENSCVAG00000011536	rcl1	88	79.027	ENSPSIG00000012302	RCL1	100	79.027	Pelodiscus_sinensis
ENSCVAG00000011536	rcl1	100	89.785	ENSPMGG00000024007	rcl1	100	89.785	Periophthalmus_magnuspinnatus
ENSCVAG00000011536	rcl1	99	80.811	ENSPEMG00000023275	Rcl1	99	80.811	Peromyscus_maniculatus_bairdii
ENSCVAG00000011536	rcl1	99	79.459	ENSPCIG00000000188	RCL1	99	79.459	Phascolarctos_cinereus
ENSCVAG00000011536	rcl1	100	94.624	ENSPFOG00000019682	rcl1	99	94.624	Poecilia_formosa
ENSCVAG00000011536	rcl1	100	94.624	ENSPLAG00000022354	rcl1	100	94.624	Poecilia_latipinna
ENSCVAG00000011536	rcl1	100	94.624	ENSPMEG00000008131	rcl1	100	94.624	Poecilia_mexicana
ENSCVAG00000011536	rcl1	100	94.355	ENSPREG00000008032	rcl1	100	94.355	Poecilia_reticulata
ENSCVAG00000011536	rcl1	99	80.811	ENSPPYG00000019244	RCL1	99	80.811	Pongo_abelii
ENSCVAG00000011536	rcl1	99	73.243	ENSPCAG00000001440	RCL1	99	73.243	Procavia_capensis
ENSCVAG00000011536	rcl1	99	80.811	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSCVAG00000011536	rcl1	99	80.000	ENSPVAG00000015752	RCL1	99	80.000	Pteropus_vampyrus
ENSCVAG00000011536	rcl1	100	91.935	ENSPNYG00000012910	rcl1	100	91.935	Pundamilia_nyererei
ENSCVAG00000011536	rcl1	99	85.598	ENSPNAG00000028307	rcl1	91	85.598	Pygocentrus_nattereri
ENSCVAG00000011536	rcl1	99	79.730	ENSRNOG00000015491	Rcl1	99	79.730	Rattus_norvegicus
ENSCVAG00000011536	rcl1	99	80.000	ENSRBIG00000035818	RCL1	99	80.000	Rhinopithecus_bieti
ENSCVAG00000011536	rcl1	99	80.270	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSCVAG00000011536	rcl1	98	38.753	YOL010W	-	97	38.753	Saccharomyces_cerevisiae
ENSCVAG00000011536	rcl1	99	80.541	ENSSBOG00000026369	RCL1	99	80.541	Saimiri_boliviensis_boliviensis
ENSCVAG00000011536	rcl1	89	80.665	ENSSHAG00000014086	RCL1	100	80.665	Sarcophilus_harrisii
ENSCVAG00000011536	rcl1	100	83.065	ENSSFOG00015023020	rcl1	100	83.065	Scleropages_formosus
ENSCVAG00000011536	rcl1	100	91.935	ENSSMAG00000019751	rcl1	86	91.935	Scophthalmus_maximus
ENSCVAG00000011536	rcl1	100	92.204	ENSSDUG00000006349	rcl1	100	92.204	Seriola_dumerili
ENSCVAG00000011536	rcl1	100	91.398	ENSSLDG00000022076	rcl1	100	91.398	Seriola_lalandi_dorsalis
ENSCVAG00000011536	rcl1	99	80.270	ENSSARG00000009260	RCL1	99	80.270	Sorex_araneus
ENSCVAG00000011536	rcl1	99	77.568	ENSSPUG00000016330	RCL1	99	77.568	Sphenodon_punctatus
ENSCVAG00000011536	rcl1	100	93.280	ENSSPAG00000018038	rcl1	100	93.280	Stegastes_partitus
ENSCVAG00000011536	rcl1	99	80.541	ENSSSCG00000005217	RCL1	82	80.541	Sus_scrofa
ENSCVAG00000011536	rcl1	99	75.538	ENSTGUG00000005138	RCL1	99	75.538	Taeniopygia_guttata
ENSCVAG00000011536	rcl1	100	87.634	ENSTRUG00000010493	rcl1	100	87.634	Takifugu_rubripes
ENSCVAG00000011536	rcl1	100	84.946	ENSTNIG00000013214	rcl1	99	84.946	Tetraodon_nigroviridis
ENSCVAG00000011536	rcl1	99	75.676	ENSTBEG00000016339	RCL1	99	75.676	Tupaia_belangeri
ENSCVAG00000011536	rcl1	99	80.000	ENSTTRG00000016525	RCL1	99	80.000	Tursiops_truncatus
ENSCVAG00000011536	rcl1	99	81.622	ENSUAMG00000005598	RCL1	99	82.812	Ursus_americanus
ENSCVAG00000011536	rcl1	88	82.012	ENSUMAG00000017890	RCL1	97	82.012	Ursus_maritimus
ENSCVAG00000011536	rcl1	88	81.402	ENSVPAG00000009188	RCL1	100	81.402	Vicugna_pacos
ENSCVAG00000011536	rcl1	88	82.979	ENSVVUG00000007304	RCL1	89	82.979	Vulpes_vulpes
ENSCVAG00000011536	rcl1	100	73.600	ENSXETG00000000592	rcl1	100	73.600	Xenopus_tropicalis
ENSCVAG00000011536	rcl1	100	95.161	ENSXCOG00000004922	rcl1	100	95.161	Xiphophorus_couchianus
ENSCVAG00000011536	rcl1	100	95.161	ENSXMAG00000022366	RCL1	100	95.161	Xiphophorus_maculatus