EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000011566 (Gene tree)
Gene ID: 107095488
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7209 bases
Position: chrKL653052.1:347268-354476
Accession: 107095488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026191	zf-C3HC	PF07967.13	2.4e-33	1	1
ENSCVAP00000026191	Rsm1	PF08600.10	5.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000016021	-	2597	XM_015391607	ENSCVAP00000026191	498 (aa)	XP_015247093	UPI000742C560

Gene Model

Click here to download ENSCVAG00000011566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011566	zc3hc1	94	41.582	ENSG00000091732	ZC3HC1	95	42.355	Homo_sapiens
ENSCVAG00000011566	zc3hc1	99	74.400	ENSAPOG00000009078	zc3hc1	100	74.400	Acanthochromis_polyacanthus
ENSCVAG00000011566	zc3hc1	94	41.922	ENSAMEG00000005425	ZC3HC1	94	42.536	Ailuropoda_melanoleuca
ENSCVAG00000011566	zc3hc1	99	73.000	ENSACIG00000019513	zc3hc1	99	73.000	Amphilophus_citrinellus
ENSCVAG00000011566	zc3hc1	99	73.347	ENSAOCG00000024310	zc3hc1	100	73.347	Amphiprion_ocellaris
ENSCVAG00000011566	zc3hc1	99	72.946	ENSAPEG00000004907	zc3hc1	100	72.946	Amphiprion_percula
ENSCVAG00000011566	zc3hc1	86	73.672	ENSATEG00000016898	zc3hc1	90	73.672	Anabas_testudineus
ENSCVAG00000011566	zc3hc1	86	42.377	ENSAPLG00000003832	ZC3HC1	96	43.498	Anas_platyrhynchos
ENSCVAG00000011566	zc3hc1	96	41.910	ENSACAG00000001638	ZC3HC1	96	41.910	Anolis_carolinensis
ENSCVAG00000011566	zc3hc1	94	40.283	ENSANAG00000022213	ZC3HC1	93	43.824	Aotus_nancymaae
ENSCVAG00000011566	zc3hc1	91	73.789	ENSACLG00000025033	zc3hc1	99	73.789	Astatotilapia_calliptera
ENSCVAG00000011566	zc3hc1	94	48.517	ENSAMXG00000036792	zc3hc1	97	48.517	Astyanax_mexicanus
ENSCVAG00000011566	zc3hc1	94	42.566	ENSBTAG00000011247	ZC3HC1	94	43.177	Bos_taurus
ENSCVAG00000011566	zc3hc1	94	41.785	ENSCJAG00000010536	ZC3HC1	93	45.294	Callithrix_jacchus
ENSCVAG00000011566	zc3hc1	94	42.418	ENSCAFG00000029401	-	92	42.623	Canis_familiaris
ENSCVAG00000011566	zc3hc1	94	42.418	ENSCAFG00000028735	-	94	42.623	Canis_familiaris
ENSCVAG00000011566	zc3hc1	94	42.828	ENSCAFG00000031850	-	94	43.033	Canis_familiaris
ENSCVAG00000011566	zc3hc1	94	42.566	ENSCAFG00000001499	-	92	42.770	Canis_familiaris
ENSCVAG00000011566	zc3hc1	94	42.041	ENSCAFG00020023333	-	94	42.245	Canis_lupus_dingo
ENSCVAG00000011566	zc3hc1	94	42.623	ENSCAFG00020006829	-	94	42.828	Canis_lupus_dingo
ENSCVAG00000011566	zc3hc1	94	37.988	ENSCHIG00000014103	ZC3HC1	93	38.604	Capra_hircus
ENSCVAG00000011566	zc3hc1	94	40.568	ENSTSYG00000002843	ZC3HC1	93	43.529	Carlito_syrichta
ENSCVAG00000011566	zc3hc1	86	35.874	ENSCAPG00000016300	ZC3HC1	93	35.874	Cavia_aperea
ENSCVAG00000011566	zc3hc1	94	42.105	ENSCPOG00000014034	ZC3HC1	94	42.797	Cavia_porcellus
ENSCVAG00000011566	zc3hc1	94	30.567	ENSCCAG00000020384	ZC3HC1	98	36.145	Cebus_capucinus
ENSCVAG00000011566	zc3hc1	94	41.176	ENSCATG00000023130	ZC3HC1	94	41.785	Cercocebus_atys
ENSCVAG00000011566	zc3hc1	82	33.890	ENSCLAG00000008260	ZC3HC1	87	34.368	Chinchilla_lanigera
ENSCVAG00000011566	zc3hc1	72	38.021	ENSCSAG00000009881	ZC3HC1	96	38.802	Chlorocebus_sabaeus
ENSCVAG00000011566	zc3hc1	86	45.089	ENSCHOG00000011846	ZC3HC1	95	45.089	Choloepus_hoffmanni
ENSCVAG00000011566	zc3hc1	97	42.147	ENSCPBG00000017519	ZC3HC1	97	43.426	Chrysemys_picta_bellii
ENSCVAG00000011566	zc3hc1	94	41.260	ENSCANG00000029091	ZC3HC1	94	41.870	Colobus_angolensis_palliatus
ENSCVAG00000011566	zc3hc1	94	42.562	ENSCGRG00001018805	Zc3hc1	93	45.732	Cricetulus_griseus_chok1gshd
ENSCVAG00000011566	zc3hc1	94	41.942	ENSCGRG00000017114	Zc3hc1	94	41.942	Cricetulus_griseus_crigri
ENSCVAG00000011566	zc3hc1	99	66.932	ENSCSEG00000009284	zc3hc1	98	66.932	Cynoglossus_semilaevis
ENSCVAG00000011566	zc3hc1	97	57.938	ENSDARG00000062651	zc3hc1	97	57.938	Danio_rerio
ENSCVAG00000011566	zc3hc1	94	42.593	ENSDNOG00000045016	ZC3HC1	94	42.828	Dasypus_novemcinctus
ENSCVAG00000011566	zc3hc1	95	40.286	ENSDORG00000008697	Zc3hc1	93	42.012	Dipodomys_ordii
ENSCVAG00000011566	zc3hc1	86	44.494	ENSEASG00005008789	ZC3HC1	92	45.372	Equus_asinus_asinus
ENSCVAG00000011566	zc3hc1	94	42.505	ENSECAG00000017886	ZC3HC1	94	43.121	Equus_caballus
ENSCVAG00000011566	zc3hc1	64	47.647	ENSEEUG00000003123	ZC3HC1	65	47.647	Erinaceus_europaeus
ENSCVAG00000011566	zc3hc1	99	55.686	ENSELUG00000023168	zc3hc1	99	56.890	Esox_lucius
ENSCVAG00000011566	zc3hc1	94	42.181	ENSFCAG00000010429	ZC3HC1	93	45.294	Felis_catus
ENSCVAG00000011566	zc3hc1	90	40.717	ENSFALG00000005006	ZC3HC1	98	40.717	Ficedula_albicollis
ENSCVAG00000011566	zc3hc1	94	41.260	ENSFDAG00000019897	ZC3HC1	94	42.041	Fukomys_damarensis
ENSCVAG00000011566	zc3hc1	99	83.871	ENSFHEG00000020149	zc3hc1	100	83.871	Fundulus_heteroclitus
ENSCVAG00000011566	zc3hc1	98	60.041	ENSGMOG00000002914	zc3hc1	99	60.041	Gadus_morhua
ENSCVAG00000011566	zc3hc1	94	41.260	ENSGALG00000008003	ZC3HC1	95	41.463	Gallus_gallus
ENSCVAG00000011566	zc3hc1	99	85.887	ENSGAFG00000016095	zc3hc1	100	85.887	Gambusia_affinis
ENSCVAG00000011566	zc3hc1	99	68.410	ENSGACG00000019706	zc3hc1	100	68.410	Gasterosteus_aculeatus
ENSCVAG00000011566	zc3hc1	78	42.079	ENSGAGG00000016106	ZC3HC1	99	43.500	Gopherus_agassizii
ENSCVAG00000011566	zc3hc1	94	41.785	ENSGGOG00000015504	ZC3HC1	95	42.562	Gorilla_gorilla
ENSCVAG00000011566	zc3hc1	99	73.038	ENSHBUG00000008347	zc3hc1	99	73.038	Haplochromis_burtoni
ENSCVAG00000011566	zc3hc1	94	42.449	ENSHGLG00000005085	ZC3HC1	93	45.133	Heterocephalus_glaber_female
ENSCVAG00000011566	zc3hc1	94	42.536	ENSHGLG00100011395	ZC3HC1	93	45.133	Heterocephalus_glaber_male
ENSCVAG00000011566	zc3hc1	99	63.454	ENSHCOG00000014309	zc3hc1	100	63.984	Hippocampus_comes
ENSCVAG00000011566	zc3hc1	94	41.393	ENSSTOG00000023599	-	91	45.607	Ictidomys_tridecemlineatus
ENSCVAG00000011566	zc3hc1	99	74.194	ENSKMAG00000015315	zc3hc1	93	74.194	Kryptolebias_marmoratus
ENSCVAG00000011566	zc3hc1	99	64.671	ENSLBEG00000017325	zc3hc1	99	64.671	Labrus_bergylta
ENSCVAG00000011566	zc3hc1	79	41.371	ENSLACG00000013032	ZC3HC1	99	41.570	Latimeria_chalumnae
ENSCVAG00000011566	zc3hc1	96	51.815	ENSLOCG00000015963	zc3hc1	97	51.815	Lepisosteus_oculatus
ENSCVAG00000011566	zc3hc1	94	41.683	ENSLAFG00000001292	ZC3HC1	94	42.285	Loxodonta_africana
ENSCVAG00000011566	zc3hc1	94	41.176	ENSMFAG00000030176	ZC3HC1	94	41.785	Macaca_fascicularis
ENSCVAG00000011566	zc3hc1	94	40.688	ENSMMUG00000006155	ZC3HC1	97	39.108	Macaca_mulatta
ENSCVAG00000011566	zc3hc1	94	41.176	ENSMNEG00000011833	ZC3HC1	94	41.785	Macaca_nemestrina
ENSCVAG00000011566	zc3hc1	94	41.176	ENSMLEG00000027328	ZC3HC1	97	39.062	Mandrillus_leucophaeus
ENSCVAG00000011566	zc3hc1	99	72.745	ENSMAMG00000010691	zc3hc1	99	72.745	Mastacembelus_armatus
ENSCVAG00000011566	zc3hc1	99	73.239	ENSMZEG00005007142	zc3hc1	99	73.239	Maylandia_zebra
ENSCVAG00000011566	zc3hc1	94	40.161	ENSMGAG00000002977	ZC3HC1	95	41.165	Meleagris_gallopavo
ENSCVAG00000011566	zc3hc1	81	40.000	ENSMAUG00000017032	Zc3hc1	90	40.476	Mesocricetus_auratus
ENSCVAG00000011566	zc3hc1	94	41.379	ENSMICG00000009167	ZC3HC1	93	43.824	Microcebus_murinus
ENSCVAG00000011566	zc3hc1	94	43.182	ENSMOCG00000015239	Zc3hc1	93	47.256	Microtus_ochrogaster
ENSCVAG00000011566	zc3hc1	87	72.273	ENSMMOG00000002204	zc3hc1	99	72.273	Mola_mola
ENSCVAG00000011566	zc3hc1	97	32.115	ENSMODG00000014630	ZC3HC1	96	32.115	Monodelphis_domestica
ENSCVAG00000011566	zc3hc1	98	70.408	ENSMALG00000014447	zc3hc1	99	70.825	Monopterus_albus
ENSCVAG00000011566	zc3hc1	95	43.117	MGP_CAROLIEiJ_G0028183	Zc3hc1	93	46.177	Mus_caroli
ENSCVAG00000011566	zc3hc1	95	42.626	ENSMUSG00000039130	Zc3hc1	93	45.732	Mus_musculus
ENSCVAG00000011566	zc3hc1	94	39.511	MGP_PahariEiJ_G0021941	Zc3hc1	92	41.159	Mus_pahari
ENSCVAG00000011566	zc3hc1	95	42.626	MGP_SPRETEiJ_G0029183	Zc3hc1	93	45.732	Mus_spretus
ENSCVAG00000011566	zc3hc1	89	42.299	ENSMPUG00000005297	ZC3HC1	88	42.950	Mustela_putorius_furo
ENSCVAG00000011566	zc3hc1	94	42.770	ENSMLUG00000000063	-	94	42.770	Myotis_lucifugus
ENSCVAG00000011566	zc3hc1	67	38.268	ENSMLUG00000029228	-	98	38.268	Myotis_lucifugus
ENSCVAG00000011566	zc3hc1	95	42.972	ENSNGAG00000019014	Zc3hc1	94	45.507	Nannospalax_galili
ENSCVAG00000011566	zc3hc1	99	73.239	ENSNBRG00000004577	zc3hc1	99	73.239	Neolamprologus_brichardi
ENSCVAG00000011566	zc3hc1	94	41.176	ENSNLEG00000012698	ZC3HC1	94	41.785	Nomascus_leucogenys
ENSCVAG00000011566	zc3hc1	97	42.147	ENSMEUG00000011023	ZC3HC1	96	42.147	Notamacropus_eugenii
ENSCVAG00000011566	zc3hc1	94	40.041	ENSODEG00000014604	ZC3HC1	93	43.653	Octodon_degus
ENSCVAG00000011566	zc3hc1	99	72.636	ENSONIG00000011644	zc3hc1	99	72.636	Oreochromis_niloticus
ENSCVAG00000011566	zc3hc1	86	39.474	ENSOANG00000011460	ZC3HC1	95	39.693	Ornithorhynchus_anatinus
ENSCVAG00000011566	zc3hc1	98	41.683	ENSOCUG00000017137	ZC3HC1	97	42.270	Oryctolagus_cuniculus
ENSCVAG00000011566	zc3hc1	98	68.357	ENSORLG00000014409	zc3hc1	99	68.675	Oryzias_latipes
ENSCVAG00000011566	zc3hc1	98	68.763	ENSORLG00020015874	zc3hc1	99	69.076	Oryzias_latipes_hni
ENSCVAG00000011566	zc3hc1	98	68.763	ENSORLG00015014641	zc3hc1	99	69.076	Oryzias_latipes_hsok
ENSCVAG00000011566	zc3hc1	99	69.246	ENSOMEG00000020604	zc3hc1	98	69.433	Oryzias_melastigma
ENSCVAG00000011566	zc3hc1	99	68.839	ENSOMEG00000000215	zc3hc1	98	69.028	Oryzias_melastigma
ENSCVAG00000011566	zc3hc1	96	37.177	ENSOGAG00000026193	ZC3HC1	97	38.370	Otolemur_garnettii
ENSCVAG00000011566	zc3hc1	94	41.513	ENSOARG00000004907	ZC3HC1	92	42.127	Ovis_aries
ENSCVAG00000011566	zc3hc1	94	41.582	ENSPPAG00000043172	ZC3HC1	95	42.355	Pan_paniscus
ENSCVAG00000011566	zc3hc1	94	41.975	ENSPPRG00000001004	ZC3HC1	93	45.000	Panthera_pardus
ENSCVAG00000011566	zc3hc1	94	42.181	ENSPTIG00000007823	ZC3HC1	93	45.294	Panthera_tigris_altaica
ENSCVAG00000011566	zc3hc1	94	41.379	ENSPTRG00000019685	ZC3HC1	95	42.355	Pan_troglodytes
ENSCVAG00000011566	zc3hc1	94	40.486	ENSPANG00000014229	ZC3HC1	94	41.093	Papio_anubis
ENSCVAG00000011566	zc3hc1	99	51.479	ENSPKIG00000007172	zc3hc1	99	51.479	Paramormyrops_kingsleyae
ENSCVAG00000011566	zc3hc1	87	42.117	ENSPSIG00000016646	ZC3HC1	87	42.208	Pelodiscus_sinensis
ENSCVAG00000011566	zc3hc1	95	64.167	ENSPMGG00000003548	zc3hc1	99	65.294	Periophthalmus_magnuspinnatus
ENSCVAG00000011566	zc3hc1	94	41.942	ENSPEMG00000000514	Zc3hc1	93	45.732	Peromyscus_maniculatus_bairdii
ENSCVAG00000011566	zc3hc1	95	40.162	ENSPCIG00000020619	ZC3HC1	99	41.542	Phascolarctos_cinereus
ENSCVAG00000011566	zc3hc1	99	84.677	ENSPFOG00000003466	zc3hc1	100	84.677	Poecilia_formosa
ENSCVAG00000011566	zc3hc1	99	85.081	ENSPLAG00000022211	zc3hc1	100	85.081	Poecilia_latipinna
ENSCVAG00000011566	zc3hc1	99	84.677	ENSPMEG00000001458	zc3hc1	100	84.677	Poecilia_mexicana
ENSCVAG00000011566	zc3hc1	99	84.476	ENSPREG00000004004	zc3hc1	100	84.476	Poecilia_reticulata
ENSCVAG00000011566	zc3hc1	94	38.788	ENSPPYG00000017998	ZC3HC1	94	39.394	Pongo_abelii
ENSCVAG00000011566	zc3hc1	86	42.731	ENSPCAG00000001182	ZC3HC1	93	43.392	Procavia_capensis
ENSCVAG00000011566	zc3hc1	94	42.191	ENSPCOG00000017354	ZC3HC1	93	44.706	Propithecus_coquereli
ENSCVAG00000011566	zc3hc1	95	39.554	ENSPVAG00000003195	ZC3HC1	95	40.404	Pteropus_vampyrus
ENSCVAG00000011566	zc3hc1	99	73.239	ENSPNYG00000020692	zc3hc1	99	73.239	Pundamilia_nyererei
ENSCVAG00000011566	zc3hc1	98	48.880	ENSPNAG00000020746	zc3hc1	100	48.880	Pygocentrus_nattereri
ENSCVAG00000011566	zc3hc1	94	41.093	ENSRNOG00000010154	Zc3hc1	94	41.296	Rattus_norvegicus
ENSCVAG00000011566	zc3hc1	86	42.539	ENSRBIG00000029409	ZC3HC1	93	46.959	Rhinopithecus_bieti
ENSCVAG00000011566	zc3hc1	94	40.650	ENSRROG00000041831	ZC3HC1	93	43.658	Rhinopithecus_roxellana
ENSCVAG00000011566	zc3hc1	80	48.214	ENSSBOG00000032787	ZC3HC1	93	48.214	Saimiri_boliviensis_boliviensis
ENSCVAG00000011566	zc3hc1	89	42.612	ENSSHAG00000002529	ZC3HC1	97	42.521	Sarcophilus_harrisii
ENSCVAG00000011566	zc3hc1	97	51.004	ENSSFOG00015003667	zc3hc1	93	51.004	Scleropages_formosus
ENSCVAG00000011566	zc3hc1	99	70.541	ENSSMAG00000000647	zc3hc1	90	70.942	Scophthalmus_maximus
ENSCVAG00000011566	zc3hc1	99	73.239	ENSSDUG00000004241	zc3hc1	97	73.239	Seriola_dumerili
ENSCVAG00000011566	zc3hc1	99	74.044	ENSSLDG00000025056	zc3hc1	97	74.044	Seriola_lalandi_dorsalis
ENSCVAG00000011566	zc3hc1	95	37.052	ENSSARG00000012013	ZC3HC1	94	37.649	Sorex_araneus
ENSCVAG00000011566	zc3hc1	82	38.372	ENSSPUG00000000778	ZC3HC1	81	38.372	Sphenodon_punctatus
ENSCVAG00000011566	zc3hc1	99	76.200	ENSSPAG00000020041	zc3hc1	100	76.200	Stegastes_partitus
ENSCVAG00000011566	zc3hc1	94	42.008	ENSSSCG00000016565	ZC3HC1	99	42.040	Sus_scrofa
ENSCVAG00000011566	zc3hc1	99	63.581	ENSTRUG00000020077	zc3hc1	100	63.581	Takifugu_rubripes
ENSCVAG00000011566	zc3hc1	99	63.655	ENSTNIG00000007585	zc3hc1	99	64.331	Tetraodon_nigroviridis
ENSCVAG00000011566	zc3hc1	95	34.476	ENSTBEG00000005216	ZC3HC1	95	34.879	Tupaia_belangeri
ENSCVAG00000011566	zc3hc1	95	43.496	ENSTTRG00000008458	ZC3HC1	99	43.496	Tursiops_truncatus
ENSCVAG00000011566	zc3hc1	94	42.094	ENSUAMG00000020249	ZC3HC1	94	42.710	Ursus_americanus
ENSCVAG00000011566	zc3hc1	94	41.889	ENSUMAG00000009268	ZC3HC1	94	42.505	Ursus_maritimus
ENSCVAG00000011566	zc3hc1	62	41.325	ENSVPAG00000010846	ZC3HC1	60	42.271	Vicugna_pacos
ENSCVAG00000011566	zc3hc1	90	43.100	ENSVVUG00000012386	ZC3HC1	93	43.312	Vulpes_vulpes
ENSCVAG00000011566	zc3hc1	88	41.037	ENSXETG00000033900	zc3hc1	92	41.037	Xenopus_tropicalis
ENSCVAG00000011566	zc3hc1	99	81.855	ENSXCOG00000013570	zc3hc1	100	81.855	Xiphophorus_couchianus
ENSCVAG00000011566	zc3hc1	91	84.735	ENSXMAG00000010979	zc3hc1	98	84.735	Xiphophorus_maculatus