EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011712 (Gene tree)
Gene ID: 107100660
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6184 bases
Position: chrKL653498.1:177576-183759
Accession: 107100660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026286	zf-C2H2	PF00096.26	1.9e-23	1	4
ENSCVAP00000026286	zf-C2H2	PF00096.26	1.9e-23	2	4
ENSCVAP00000026286	zf-C2H2	PF00096.26	1.9e-23	3	4
ENSCVAP00000026286	zf-C2H2	PF00096.26	1.9e-23	4	4
ENSCVAP00000026286	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029275	-	1813	XM_015399231	ENSCVAP00000026286	342 (aa)	XP_015254717	UPI0007427CE5

Gene Model

Click here to download ENSCVAG00000011712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011712	-	50	39.634	ENSCVAG00000005494	-	92	39.634
ENSCVAG00000011712	-	59	34.667	ENSCVAG00000003434	-	85	40.625
ENSCVAG00000011712	-	52	41.176	ENSCVAG00000008206	-	86	41.176
ENSCVAG00000011712	-	56	38.854	ENSCVAG00000008200	-	96	38.854
ENSCVAG00000011712	-	53	42.384	ENSCVAG00000001767	-	77	42.384
ENSCVAG00000011712	-	50	37.931	ENSCVAG00000003512	-	84	37.931
ENSCVAG00000011712	-	54	52.294	ENSCVAG00000016092	-	51	52.294
ENSCVAG00000011712	-	73	38.272	ENSCVAG00000003497	-	92	38.272
ENSCVAG00000011712	-	53	42.453	ENSCVAG00000019097	-	62	42.453
ENSCVAG00000011712	-	51	36.054	ENSCVAG00000018485	-	95	36.054
ENSCVAG00000011712	-	62	37.415	ENSCVAG00000001609	-	87	37.415
ENSCVAG00000011712	-	51	44.643	ENSCVAG00000017005	sall3b	68	44.643
ENSCVAG00000011712	-	56	36.364	ENSCVAG00000018383	-	99	34.810
ENSCVAG00000011712	-	67	38.158	ENSCVAG00000020126	-	89	38.158
ENSCVAG00000011712	-	60	41.176	ENSCVAG00000011469	-	91	41.176
ENSCVAG00000011712	-	50	41.176	ENSCVAG00000006389	-	90	48.235
ENSCVAG00000011712	-	53	43.396	ENSCVAG00000019519	-	70	43.396
ENSCVAG00000011712	-	51	44.318	ENSCVAG00000022991	-	88	44.318
ENSCVAG00000011712	-	54	40.881	ENSCVAG00000017515	-	86	40.881
ENSCVAG00000011712	-	52	37.654	ENSCVAG00000006673	-	56	37.654
ENSCVAG00000011712	-	51	38.760	ENSCVAG00000016883	-	98	38.760
ENSCVAG00000011712	-	96	43.871	ENSCVAG00000020414	-	99	43.871
ENSCVAG00000011712	-	77	36.184	ENSCVAG00000008836	-	91	33.987
ENSCVAG00000011712	-	54	38.158	ENSCVAG00000006491	-	77	38.158
ENSCVAG00000011712	-	60	44.706	ENSCVAG00000016181	-	93	44.706
ENSCVAG00000011712	-	51	44.737	ENSCVAG00000008535	-	68	44.737
ENSCVAG00000011712	-	91	38.411	ENSCVAG00000021107	-	98	43.925
ENSCVAG00000011712	-	93	37.600	ENSCVAG00000013337	-	92	43.709
ENSCVAG00000011712	-	94	30.861	ENSCVAG00000006484	-	86	30.861
ENSCVAG00000011712	-	60	44.706	ENSCVAG00000010442	-	97	44.706
ENSCVAG00000011712	-	54	42.453	ENSCVAG00000014269	-	96	42.453
ENSCVAG00000011712	-	80	42.000	ENSCVAG00000022174	-	64	42.000
ENSCVAG00000011712	-	54	37.719	ENSCVAG00000003250	-	69	37.719
ENSCVAG00000011712	-	99	42.675	ENSCVAG00000005112	-	92	42.675
ENSCVAG00000011712	-	56	42.857	ENSCVAG00000003417	-	78	42.857
ENSCVAG00000011712	-	51	35.404	ENSCVAG00000000144	-	66	35.196
ENSCVAG00000011712	-	51	47.170	ENSCVAG00000023054	-	62	40.964
ENSCVAG00000011712	-	73	41.509	ENSCVAG00000021225	-	78	50.877
ENSCVAG00000011712	-	95	31.884	ENSCVAG00000006659	-	97	31.884
ENSCVAG00000011712	-	50	43.529	ENSCVAG00000012248	-	90	43.529
ENSCVAG00000011712	-	74	36.810	ENSCVAG00000014322	-	95	36.810
ENSCVAG00000011712	-	56	37.908	ENSCVAG00000015153	-	78	37.908
ENSCVAG00000011712	-	80	38.596	ENSCVAG00000000419	-	94	38.596
ENSCVAG00000011712	-	53	41.026	ENSCVAG00000020141	-	69	41.026
ENSCVAG00000011712	-	53	36.646	ENSCVAG00000016862	-	90	37.013
ENSCVAG00000011712	-	56	32.773	ENSCVAG00000009561	scrt1b	64	32.773
ENSCVAG00000011712	-	50	39.375	ENSCVAG00000010160	-	78	39.375
ENSCVAG00000011712	-	63	39.024	ENSCVAG00000012180	-	99	39.744
ENSCVAG00000011712	-	60	42.500	ENSCVAG00000012216	-	81	42.500
ENSCVAG00000011712	-	54	44.340	ENSCVAG00000019764	-	68	44.340
ENSCVAG00000011712	-	54	36.364	ENSCVAG00000002295	-	77	36.364
ENSCVAG00000011712	-	53	34.228	ENSCVAG00000018507	-	69	34.228
ENSCVAG00000011712	-	50	37.427	ENSCVAG00000016796	-	82	44.444
ENSCVAG00000011712	-	69	45.283	ENSCVAG00000003396	-	78	45.283
ENSCVAG00000011712	-	93	41.176	ENSCVAG00000007073	-	86	41.176
ENSCVAG00000011712	-	50	39.024	ENSCVAG00000014404	-	95	39.024
ENSCVAG00000011712	-	52	39.073	ENSCVAG00000017890	-	86	46.512
ENSCVAG00000011712	-	65	38.272	ENSCVAG00000012284	-	79	38.272
ENSCVAG00000011712	-	95	38.608	ENSCVAG00000004958	-	83	38.608
ENSCVAG00000011712	-	66	34.711	ENSCVAG00000021038	scrt2	60	34.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011712	-	78	41.071	ENSAPOG00000017148	-	72	41.071	Acanthochromis_polyacanthus
ENSCVAG00000011712	-	66	44.954	ENSAMXG00000013492	-	97	50.000	Astyanax_mexicanus
ENSCVAG00000011712	-	51	46.226	ENSEBUG00000006666	-	83	46.226	Eptatretus_burgeri
ENSCVAG00000011712	-	53	33.333	ENSEBUG00000012543	-	50	35.976	Eptatretus_burgeri
ENSCVAG00000011712	-	91	53.086	ENSEBUG00000015472	-	89	53.086	Eptatretus_burgeri
ENSCVAG00000011712	-	94	38.411	ENSELUG00000000281	-	93	38.411	Esox_lucius
ENSCVAG00000011712	-	94	33.333	ENSELUG00000022965	-	86	32.941	Esox_lucius
ENSCVAG00000011712	-	94	37.748	ENSELUG00000022942	-	94	37.748	Esox_lucius
ENSCVAG00000011712	-	93	31.642	ENSGAFG00000013366	-	98	31.642	Gambusia_affinis
ENSCVAG00000011712	-	56	41.463	ENSGAFG00000021139	-	96	41.463	Gambusia_affinis
ENSCVAG00000011712	-	65	46.667	ENSGAFG00000021143	-	56	46.667	Gambusia_affinis
ENSCVAG00000011712	-	94	30.769	ENSHCOG00000020976	-	95	30.769	Hippocampus_comes
ENSCVAG00000011712	-	94	32.537	ENSHCOG00000019006	-	99	38.519	Hippocampus_comes
ENSCVAG00000011712	-	93	47.619	ENSHCOG00000014999	-	99	47.619	Hippocampus_comes
ENSCVAG00000011712	-	94	42.056	ENSHCOG00000014994	-	84	42.056	Hippocampus_comes
ENSCVAG00000011712	-	93	44.706	ENSHCOG00000015003	-	98	44.706	Hippocampus_comes
ENSCVAG00000011712	-	60	40.909	ENSHCOG00000007681	-	84	40.909	Hippocampus_comes
ENSCVAG00000011712	-	56	38.710	ENSHCOG00000001238	-	99	38.710	Hippocampus_comes
ENSCVAG00000011712	-	50	37.594	ENSHCOG00000020924	-	65	37.594	Hippocampus_comes
ENSCVAG00000011712	-	51	48.750	ENSHCOG00000007464	-	62	48.214	Hippocampus_comes
ENSCVAG00000011712	-	60	50.000	ENSHCOG00000015355	-	86	48.193	Hippocampus_comes
ENSCVAG00000011712	-	52	39.634	ENSHCOG00000007358	-	79	39.634	Hippocampus_comes
ENSCVAG00000011712	-	59	41.121	ENSHCOG00000001256	-	66	41.121	Hippocampus_comes
ENSCVAG00000011712	-	93	32.323	ENSHCOG00000014797	-	96	36.184	Hippocampus_comes
ENSCVAG00000011712	-	51	34.857	ENSHCOG00000014792	-	52	34.857	Hippocampus_comes
ENSCVAG00000011712	-	94	36.486	ENSHCOG00000001870	-	98	36.486	Hippocampus_comes
ENSCVAG00000011712	-	93	43.396	ENSHCOG00000009103	-	99	43.396	Hippocampus_comes
ENSCVAG00000011712	-	94	35.135	ENSHCOG00000008133	-	96	35.135	Hippocampus_comes
ENSCVAG00000011712	-	54	37.333	ENSHCOG00000008742	-	74	37.333	Hippocampus_comes
ENSCVAG00000011712	-	51	45.000	ENSLBEG00000025139	-	75	45.000	Labrus_bergylta
ENSCVAG00000011712	-	50	46.067	ENSLBEG00000011588	-	86	46.067	Labrus_bergylta
ENSCVAG00000011712	-	94	50.000	ENSLBEG00000008733	-	96	50.000	Labrus_bergylta
ENSCVAG00000011712	-	52	44.340	ENSMZEG00005015685	-	58	44.340	Maylandia_zebra
ENSCVAG00000011712	-	57	44.340	ENSNBRG00000021998	-	66	44.340	Neolamprologus_brichardi
ENSCVAG00000011712	-	79	37.500	ENSORLG00000028456	-	97	36.937	Oryzias_latipes
ENSCVAG00000011712	-	52	39.073	ENSORLG00000000197	-	85	39.073	Oryzias_latipes
ENSCVAG00000011712	-	94	39.216	ENSORLG00000025200	-	90	36.471	Oryzias_latipes
ENSCVAG00000011712	-	54	39.231	ENSORLG00000030610	-	62	47.619	Oryzias_latipes
ENSCVAG00000011712	-	68	38.365	ENSORLG00000012485	-	67	38.365	Oryzias_latipes
ENSCVAG00000011712	-	54	40.909	ENSORLG00000028381	-	99	40.909	Oryzias_latipes
ENSCVAG00000011712	-	60	41.026	ENSORLG00000001749	-	92	43.333	Oryzias_latipes
ENSCVAG00000011712	-	77	43.519	ENSORLG00000027009	-	98	43.519	Oryzias_latipes
ENSCVAG00000011712	-	73	39.597	ENSORLG00000026684	-	90	39.597	Oryzias_latipes
ENSCVAG00000011712	-	53	40.714	ENSORLG00000028433	-	85	40.714	Oryzias_latipes
ENSCVAG00000011712	-	73	34.906	ENSORLG00000023744	-	73	44.444	Oryzias_latipes
ENSCVAG00000011712	-	51	46.602	ENSORLG00000029896	-	75	46.602	Oryzias_latipes
ENSCVAG00000011712	-	72	39.865	ENSORLG00000000247	-	88	39.865	Oryzias_latipes
ENSCVAG00000011712	-	57	48.113	ENSORLG00000000420	-	95	48.113	Oryzias_latipes
ENSCVAG00000011712	-	72	39.073	ENSORLG00000023809	-	90	39.073	Oryzias_latipes
ENSCVAG00000011712	-	59	42.336	ENSORLG00000023806	-	94	45.263	Oryzias_latipes
ENSCVAG00000011712	-	54	39.216	ENSORLG00020009419	-	85	49.057	Oryzias_latipes_hni
ENSCVAG00000011712	-	94	39.695	ENSORLG00020021196	-	91	39.695	Oryzias_latipes_hni
ENSCVAG00000011712	-	51	41.216	ENSORLG00020000161	-	85	41.216	Oryzias_latipes_hni
ENSCVAG00000011712	-	74	44.295	ENSORLG00020009089	-	82	44.295	Oryzias_latipes_hni
ENSCVAG00000011712	-	52	41.121	ENSORLG00020000246	-	83	41.121	Oryzias_latipes_hni
ENSCVAG00000011712	-	51	43.396	ENSORLG00020009184	-	77	43.396	Oryzias_latipes_hni
ENSCVAG00000011712	-	51	41.060	ENSORLG00020010916	-	55	41.060	Oryzias_latipes_hni
ENSCVAG00000011712	-	51	41.667	ENSORLG00020008346	-	87	40.769	Oryzias_latipes_hni
ENSCVAG00000011712	-	52	36.601	ENSORLG00020007967	-	80	47.059	Oryzias_latipes_hni
ENSCVAG00000011712	-	94	39.216	ENSORLG00020008240	-	90	36.471	Oryzias_latipes_hni
ENSCVAG00000011712	-	52	42.157	ENSORLG00020010647	-	80	42.157	Oryzias_latipes_hni
ENSCVAG00000011712	-	64	34.831	ENSORLG00020008484	-	89	38.816	Oryzias_latipes_hni
ENSCVAG00000011712	-	56	37.888	ENSORLG00020008424	-	83	37.888	Oryzias_latipes_hni
ENSCVAG00000011712	-	60	42.636	ENSORLG00020004370	-	98	42.636	Oryzias_latipes_hni
ENSCVAG00000011712	-	72	45.122	ENSORLG00015012138	-	73	45.122	Oryzias_latipes_hsok
ENSCVAG00000011712	-	61	39.877	ENSORLG00015011401	-	88	46.237	Oryzias_latipes_hsok
ENSCVAG00000011712	-	54	39.552	ENSORLG00015010933	-	72	39.552	Oryzias_latipes_hsok
ENSCVAG00000011712	-	96	38.365	ENSORLG00015019853	-	97	38.365	Oryzias_latipes_hsok
ENSCVAG00000011712	-	73	41.447	ENSORLG00015012208	-	92	41.447	Oryzias_latipes_hsok
ENSCVAG00000011712	-	57	47.573	ENSORLG00015007986	-	95	47.573	Oryzias_latipes_hsok
ENSCVAG00000011712	-	78	35.433	ENSORLG00015011496	-	91	35.433	Oryzias_latipes_hsok
ENSCVAG00000011712	-	78	38.562	ENSORLG00015011758	-	89	38.562	Oryzias_latipes_hsok
ENSCVAG00000011712	-	72	42.484	ENSORLG00015012158	-	89	42.484	Oryzias_latipes_hsok
ENSCVAG00000011712	-	59	37.736	ENSOMEG00000021556	-	56	37.736	Oryzias_melastigma
ENSCVAG00000011712	-	57	41.727	ENSOMEG00000010398	-	90	37.748	Oryzias_melastigma
ENSCVAG00000011712	-	53	46.296	ENSOMEG00000014676	-	97	37.086	Oryzias_melastigma
ENSCVAG00000011712	-	51	44.860	ENSOMEG00000010745	-	80	44.860	Oryzias_melastigma
ENSCVAG00000011712	-	73	38.636	ENSOMEG00000012403	-	89	38.636	Oryzias_melastigma
ENSCVAG00000011712	-	82	44.340	ENSOMEG00000021518	-	97	45.556	Oryzias_melastigma
ENSCVAG00000011712	-	59	39.216	ENSOMEG00000003577	-	93	39.216	Oryzias_melastigma
ENSCVAG00000011712	-	53	48.889	ENSOMEG00000013198	-	85	48.889	Oryzias_melastigma
ENSCVAG00000011712	-	61	44.944	ENSOMEG00000018485	-	62	44.944	Oryzias_melastigma
ENSCVAG00000011712	-	53	40.952	ENSOMEG00000006224	-	73	40.952	Oryzias_melastigma
ENSCVAG00000011712	-	52	40.523	ENSOMEG00000020951	-	83	40.523	Oryzias_melastigma
ENSCVAG00000011712	-	72	45.161	ENSOMEG00000007495	-	78	45.161	Oryzias_melastigma
ENSCVAG00000011712	-	51	43.925	ENSOMEG00000004527	-	85	43.925	Oryzias_melastigma
ENSCVAG00000011712	-	53	37.086	ENSOMEG00000019840	-	90	36.747	Oryzias_melastigma
ENSCVAG00000011712	-	74	41.964	ENSOMEG00000007214	-	68	41.964	Oryzias_melastigma
ENSCVAG00000011712	-	52	35.948	ENSOMEG00000018498	-	89	35.948	Oryzias_melastigma
ENSCVAG00000011712	-	59	46.237	ENSPMGG00000000466	-	87	44.340	Periophthalmus_magnuspinnatus
ENSCVAG00000011712	-	94	43.396	ENSPFOG00000008666	-	99	43.396	Poecilia_formosa
ENSCVAG00000011712	-	94	44.545	ENSPFOG00000023439	-	98	44.545	Poecilia_formosa
ENSCVAG00000011712	-	92	30.588	ENSPLAG00000023077	-	97	30.588	Poecilia_latipinna
ENSCVAG00000011712	-	94	32.267	ENSPMEG00000013952	-	99	32.267	Poecilia_mexicana
ENSCVAG00000011712	-	86	37.908	ENSPMEG00000014674	-	92	37.908	Poecilia_mexicana
ENSCVAG00000011712	-	52	38.889	ENSPMEG00000014665	-	99	38.889	Poecilia_mexicana
ENSCVAG00000011712	-	93	41.509	ENSPREG00000002615	-	91	41.509	Poecilia_reticulata
ENSCVAG00000011712	-	54	43.750	ENSPREG00000016308	-	68	43.750	Poecilia_reticulata
ENSCVAG00000011712	-	90	46.226	ENSPNYG00000006847	-	94	47.649	Pundamilia_nyererei
ENSCVAG00000011712	-	95	39.048	ENSSDUG00000019911	-	98	39.048	Seriola_dumerili
ENSCVAG00000011712	-	50	36.842	ENSSDUG00000022914	-	51	36.842	Seriola_dumerili
ENSCVAG00000011712	-	50	44.340	ENSSLDG00000001860	-	71	44.340	Seriola_lalandi_dorsalis
ENSCVAG00000011712	-	51	44.037	ENSSLDG00000018033	-	62	44.037	Seriola_lalandi_dorsalis
ENSCVAG00000011712	-	75	40.299	ENSXCOG00000008056	-	63	40.299	Xiphophorus_couchianus