EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000011828 (Gene tree)
Gene ID: 107091544
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2210 bases
Position: chrKL652842.1:694143-696352
Accession: 107091544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	1	6
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	2	6
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	3	6
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	4	6
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	5	6
ENSCVAP00000026325	zf-C2H2	PF00096.26	3e-31	6	6
ENSCVAP00000026325	zf-met	PF12874.7	1.3e-07	1	2
ENSCVAP00000026325	zf-met	PF12874.7	1.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029297	-	1149	XM_015385527	ENSCVAP00000026325	382 (aa)	XP_015241013	-

Gene Model

Click here to download ENSCVAG00000011828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000011828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000011828	gfi1ab	82	42.222	ENSCVAG00000019646	-	99	42.222
ENSCVAG00000011828	gfi1ab	50	43.452	ENSCVAG00000003433	-	99	43.452
ENSCVAG00000011828	gfi1ab	52	40.141	ENSCVAG00000022174	-	57	40.141
ENSCVAG00000011828	gfi1ab	71	44.048	ENSCVAG00000001767	-	99	44.048
ENSCVAG00000011828	gfi1ab	77	36.111	ENSCVAG00000003190	-	81	36.111
ENSCVAG00000011828	gfi1ab	64	41.964	ENSCVAG00000006484	-	66	41.964
ENSCVAG00000011828	gfi1ab	52	42.941	ENSCVAG00000014734	-	91	42.941
ENSCVAG00000011828	gfi1ab	58	45.833	ENSCVAG00000013337	-	94	45.833
ENSCVAG00000011828	gfi1ab	78	42.500	ENSCVAG00000008836	-	66	42.500
ENSCVAG00000011828	gfi1ab	55	47.500	ENSCVAG00000012543	-	99	42.771
ENSCVAG00000011828	gfi1ab	56	41.844	ENSCVAG00000015616	-	93	41.844
ENSCVAG00000011828	gfi1ab	51	47.761	ENSCVAG00000004382	-	87	47.761
ENSCVAG00000011828	gfi1ab	59	42.958	ENSCVAG00000008535	-	80	42.958
ENSCVAG00000011828	gfi1ab	100	58.824	ENSCVAG00000004930	GFI1	100	60.244
ENSCVAG00000011828	gfi1ab	51	40.625	ENSCVAG00000016098	-	93	40.625
ENSCVAG00000011828	gfi1ab	69	42.857	ENSCVAG00000001568	-	95	42.857
ENSCVAG00000011828	gfi1ab	70	41.441	ENSCVAG00000003417	-	93	41.441
ENSCVAG00000011828	gfi1ab	70	45.000	ENSCVAG00000009747	-	80	45.000
ENSCVAG00000011828	gfi1ab	50	42.236	ENSCVAG00000002488	-	75	42.236
ENSCVAG00000011828	gfi1ab	57	45.783	ENSCVAG00000005494	-	97	45.783
ENSCVAG00000011828	gfi1ab	54	46.988	ENSCVAG00000020126	-	76	46.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000011828	gfi1ab	100	61.124	ENSG00000162676	GFI1	100	62.295	Homo_sapiens
ENSCVAG00000011828	gfi1ab	100	80.506	ENSAPOG00000015189	gfi1ab	100	80.506	Acanthochromis_polyacanthus
ENSCVAG00000011828	gfi1ab	100	78.811	ENSACIG00000016354	gfi1ab	100	78.811	Amphilophus_citrinellus
ENSCVAG00000011828	gfi1ab	100	71.355	ENSAOCG00000008339	gfi1ab	100	71.355	Amphiprion_ocellaris
ENSCVAG00000011828	gfi1ab	100	81.013	ENSAPEG00000023870	gfi1ab	100	81.013	Amphiprion_percula
ENSCVAG00000011828	gfi1ab	100	77.062	ENSATEG00000009167	gfi1ab	89	77.062	Anabas_testudineus
ENSCVAG00000011828	gfi1ab	86	63.662	ENSAPLG00000015700	GFI1	99	63.662	Anas_platyrhynchos
ENSCVAG00000011828	gfi1ab	100	63.835	ENSACAG00000004498	GFI1	100	64.096	Anolis_carolinensis
ENSCVAG00000011828	gfi1ab	100	61.072	ENSANAG00000019656	GFI1	100	61.538	Aotus_nancymaae
ENSCVAG00000011828	gfi1ab	100	82.051	ENSACLG00000026458	gfi1ab	93	82.051	Astatotilapia_calliptera
ENSCVAG00000011828	gfi1ab	100	54.188	ENSAMXG00000006669	GFI1	100	54.188	Astyanax_mexicanus
ENSCVAG00000011828	gfi1ab	100	65.174	ENSAMXG00000039600	gfi1ab	100	65.174	Astyanax_mexicanus
ENSCVAG00000011828	gfi1ab	100	65.644	ENSAMXG00000015228	-	51	65.644	Astyanax_mexicanus
ENSCVAG00000011828	gfi1ab	100	61.268	ENSBTAG00000016723	GFI1	100	62.207	Bos_taurus
ENSCVAG00000011828	gfi1ab	100	61.305	ENSCJAG00000017609	GFI1	100	61.772	Callithrix_jacchus
ENSCVAG00000011828	gfi1ab	100	59.112	ENSCAFG00000020155	GFI1	100	61.449	Canis_familiaris
ENSCVAG00000011828	gfi1ab	100	59.346	ENSCAFG00020013371	GFI1	88	61.449	Canis_lupus_dingo
ENSCVAG00000011828	gfi1ab	100	61.033	ENSCHIG00000016135	GFI1	100	62.207	Capra_hircus
ENSCVAG00000011828	gfi1ab	100	60.698	ENSCPOG00000011727	GFI1	100	62.383	Cavia_porcellus
ENSCVAG00000011828	gfi1ab	100	60.606	ENSCCAG00000036072	GFI1	100	61.305	Cebus_capucinus
ENSCVAG00000011828	gfi1ab	100	61.124	ENSCATG00000037873	GFI1	100	62.295	Cercocebus_atys
ENSCVAG00000011828	gfi1ab	100	64.677	ENSCLAG00000005915	GFI1	100	59.410	Chinchilla_lanigera
ENSCVAG00000011828	gfi1ab	98	55.556	ENSCSAG00000001469	GFI1	100	56.911	Chlorocebus_sabaeus
ENSCVAG00000011828	gfi1ab	100	61.358	ENSCANG00000034077	GFI1	100	62.529	Colobus_angolensis_palliatus
ENSCVAG00000011828	gfi1ab	100	59.251	ENSCGRG00001015432	Gfi1	100	58.548	Cricetulus_griseus_chok1gshd
ENSCVAG00000011828	gfi1ab	100	61.596	ENSCSEG00000017729	GFI1	100	61.845	Cynoglossus_semilaevis
ENSCVAG00000011828	gfi1ab	100	68.250	ENSDARG00000044457	gfi1ab	100	68.500	Danio_rerio
ENSCVAG00000011828	gfi1ab	100	59.907	ENSDNOG00000000782	GFI1	97	61.538	Dasypus_novemcinctus
ENSCVAG00000011828	gfi1ab	100	61.882	ENSEASG00005015509	GFI1	86	62.588	Equus_asinus_asinus
ENSCVAG00000011828	gfi1ab	98	53.383	ENSECAG00000006647	GFI1	94	54.386	Equus_caballus
ENSCVAG00000011828	gfi1ab	100	60.613	ENSEEUG00000000198	GFI1	100	61.085	Erinaceus_europaeus
ENSCVAG00000011828	gfi1ab	100	71.287	ENSELUG00000003015	gfi1ab	99	71.287	Esox_lucius
ENSCVAG00000011828	gfi1ab	100	62.060	ENSELUG00000019033	GFI1	100	62.657	Esox_lucius
ENSCVAG00000011828	gfi1ab	99	40.519	ENSELUG00000006948	-	99	40.365	Esox_lucius
ENSCVAG00000011828	gfi1ab	100	59.346	ENSFCAG00000005914	GFI1	100	61.215	Felis_catus
ENSCVAG00000011828	gfi1ab	100	61.443	ENSFHEG00000000341	GFI1	100	61.386	Fundulus_heteroclitus
ENSCVAG00000011828	gfi1ab	100	88.918	ENSFHEG00000010997	gfi1ab	100	88.918	Fundulus_heteroclitus
ENSCVAG00000011828	gfi1ab	100	72.152	ENSGMOG00000007737	gfi1ab	100	72.152	Gadus_morhua
ENSCVAG00000011828	gfi1ab	100	64.634	ENSGALG00000043650	GFI1	100	65.207	Gallus_gallus
ENSCVAG00000011828	gfi1ab	100	58.680	ENSGAFG00000018063	GFI1	100	60.197	Gambusia_affinis
ENSCVAG00000011828	gfi1ab	100	88.491	ENSGAFG00000016637	gfi1ab	100	88.491	Gambusia_affinis
ENSCVAG00000011828	gfi1ab	100	78.351	ENSGACG00000004257	gfi1ab	97	78.608	Gasterosteus_aculeatus
ENSCVAG00000011828	gfi1ab	100	61.124	ENSGGOG00000005320	GFI1	100	62.295	Gorilla_gorilla
ENSCVAG00000011828	gfi1ab	100	80.412	ENSHBUG00000011969	gfi1ab	100	80.412	Haplochromis_burtoni
ENSCVAG00000011828	gfi1ab	100	62.207	ENSHGLG00000008020	GFI1	100	62.441	Heterocephalus_glaber_female
ENSCVAG00000011828	gfi1ab	100	62.207	ENSHGLG00100000610	GFI1	100	62.441	Heterocephalus_glaber_male
ENSCVAG00000011828	gfi1ab	100	60.482	ENSHCOG00000008590	gfi1ab	100	60.482	Hippocampus_comes
ENSCVAG00000011828	gfi1ab	100	58.376	ENSHCOG00000019555	GFI1	100	59.645	Hippocampus_comes
ENSCVAG00000011828	gfi1ab	100	64.662	ENSIPUG00000010071	gfi1ab	87	65.500	Ictalurus_punctatus
ENSCVAG00000011828	gfi1ab	100	60.253	ENSIPUG00000013414	GFI1	100	60.253	Ictalurus_punctatus
ENSCVAG00000011828	gfi1ab	100	60.046	ENSSTOG00000014583	GFI1	100	60.277	Ictidomys_tridecemlineatus
ENSCVAG00000011828	gfi1ab	100	80.720	ENSKMAG00000003810	gfi1ab	100	80.720	Kryptolebias_marmoratus
ENSCVAG00000011828	gfi1ab	100	80.203	ENSLBEG00000027776	gfi1ab	100	80.203	Labrus_bergylta
ENSCVAG00000011828	gfi1ab	99	45.953	ENSLACG00000017590	-	99	44.845	Latimeria_chalumnae
ENSCVAG00000011828	gfi1ab	100	64.851	ENSLACG00000013362	GFI1	98	64.851	Latimeria_chalumnae
ENSCVAG00000011828	gfi1ab	100	70.075	ENSLOCG00000004711	gfi1ab	100	70.324	Lepisosteus_oculatus
ENSCVAG00000011828	gfi1ab	100	58.454	ENSLAFG00000018346	GFI1	100	60.671	Loxodonta_africana
ENSCVAG00000011828	gfi1ab	100	61.124	ENSMFAG00000045801	GFI1	100	62.295	Macaca_fascicularis
ENSCVAG00000011828	gfi1ab	100	61.124	ENSMNEG00000036338	GFI1	100	62.295	Macaca_nemestrina
ENSCVAG00000011828	gfi1ab	100	61.124	ENSMLEG00000036181	GFI1	100	62.295	Mandrillus_leucophaeus
ENSCVAG00000011828	gfi1ab	100	82.005	ENSMAMG00000008125	gfi1ab	100	82.005	Mastacembelus_armatus
ENSCVAG00000011828	gfi1ab	100	81.795	ENSMZEG00005009895	gfi1ab	100	81.795	Maylandia_zebra
ENSCVAG00000011828	gfi1ab	86	66.189	ENSMGAG00000008187	GFI1	99	66.189	Meleagris_gallopavo
ENSCVAG00000011828	gfi1ab	100	59.016	ENSMICG00000047208	GFI1	100	59.953	Microcebus_murinus
ENSCVAG00000011828	gfi1ab	100	71.066	ENSMMOG00000005556	gfi1ab	100	71.066	Mola_mola
ENSCVAG00000011828	gfi1ab	100	59.535	ENSMODG00000011802	GFI1	100	60.233	Monodelphis_domestica
ENSCVAG00000011828	gfi1ab	100	77.778	ENSMALG00000014672	gfi1ab	100	77.778	Monopterus_albus
ENSCVAG00000011828	gfi1ab	100	59.112	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSCVAG00000011828	gfi1ab	100	59.070	ENSMUSG00000029275	Gfi1	100	59.535	Mus_musculus
ENSCVAG00000011828	gfi1ab	100	59.112	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSCVAG00000011828	gfi1ab	100	59.112	MGP_SPRETEiJ_G0028507	Gfi1	100	59.767	Mus_spretus
ENSCVAG00000011828	gfi1ab	100	64.010	ENSMPUG00000004178	GFI1	97	64.010	Mustela_putorius_furo
ENSCVAG00000011828	gfi1ab	100	60.941	ENSMLUG00000015191	GFI1	97	61.882	Myotis_lucifugus
ENSCVAG00000011828	gfi1ab	100	79.241	ENSNBRG00000015774	gfi1ab	100	79.241	Neolamprologus_brichardi
ENSCVAG00000011828	gfi1ab	88	61.867	ENSNLEG00000010470	GFI1	92	62.933	Nomascus_leucogenys
ENSCVAG00000011828	gfi1ab	100	61.163	ENSOPRG00000001473	GFI1	100	62.093	Ochotona_princeps
ENSCVAG00000011828	gfi1ab	100	81.795	ENSONIG00000019246	gfi1ab	100	81.795	Oreochromis_niloticus
ENSCVAG00000011828	gfi1ab	98	54.447	ENSOCUG00000023553	GFI1	93	54.447	Oryctolagus_cuniculus
ENSCVAG00000011828	gfi1ab	100	61.905	ENSORLG00000005060	GFI1	100	62.406	Oryzias_latipes
ENSCVAG00000011828	gfi1ab	100	77.835	ENSORLG00000013806	gfi1ab	100	77.835	Oryzias_latipes
ENSCVAG00000011828	gfi1ab	100	78.093	ENSORLG00020001602	gfi1ab	100	78.093	Oryzias_latipes_hni
ENSCVAG00000011828	gfi1ab	87	66.667	ENSORLG00020002817	GFI1	100	66.667	Oryzias_latipes_hni
ENSCVAG00000011828	gfi1ab	100	60.652	ENSORLG00015006070	GFI1	100	61.404	Oryzias_latipes_hsok
ENSCVAG00000011828	gfi1ab	100	63.750	ENSOMEG00000016722	GFI1	100	63.750	Oryzias_melastigma
ENSCVAG00000011828	gfi1ab	100	65.544	ENSOGAG00000027913	GFI1	100	65.544	Otolemur_garnettii
ENSCVAG00000011828	gfi1ab	98	54.740	ENSOARG00000016329	GFI1	94	54.740	Ovis_aries
ENSCVAG00000011828	gfi1ab	100	64.599	ENSPPAG00000042186	GFI1	100	65.116	Pan_paniscus
ENSCVAG00000011828	gfi1ab	100	59.346	ENSPPRG00000007521	GFI1	100	61.215	Panthera_pardus
ENSCVAG00000011828	gfi1ab	100	61.124	ENSPTRG00000043053	GFI1	100	62.295	Pan_troglodytes
ENSCVAG00000011828	gfi1ab	100	61.124	ENSPANG00000016433	GFI1	100	62.295	Papio_anubis
ENSCVAG00000011828	gfi1ab	100	69.059	ENSPKIG00000004263	GFI1	100	69.059	Paramormyrops_kingsleyae
ENSCVAG00000011828	gfi1ab	86	66.954	ENSPSIG00000008734	GFI1	96	67.622	Pelodiscus_sinensis
ENSCVAG00000011828	gfi1ab	100	73.590	ENSPMGG00000012546	gfi1ab	100	74.425	Periophthalmus_magnuspinnatus
ENSCVAG00000011828	gfi1ab	73	70.815	ENSPMGG00000011041	GFI1	85	70.815	Periophthalmus_magnuspinnatus
ENSCVAG00000011828	gfi1ab	100	62.085	ENSPCIG00000013728	GFI1	100	62.796	Phascolarctos_cinereus
ENSCVAG00000011828	gfi1ab	100	89.258	ENSPFOG00000023214	gfi1ab	100	89.258	Poecilia_formosa
ENSCVAG00000011828	gfi1ab	100	89.258	ENSPLAG00000010879	gfi1ab	100	89.258	Poecilia_latipinna
ENSCVAG00000011828	gfi1ab	100	61.084	ENSPLAG00000005376	GFI1	91	61.330	Poecilia_latipinna
ENSCVAG00000011828	gfi1ab	100	61.940	ENSPMEG00000019299	GFI1	100	62.189	Poecilia_mexicana
ENSCVAG00000011828	gfi1ab	100	89.514	ENSPMEG00000013694	gfi1ab	100	89.514	Poecilia_mexicana
ENSCVAG00000011828	gfi1ab	100	55.990	ENSPREG00000007997	GFI1	100	55.412	Poecilia_reticulata
ENSCVAG00000011828	gfi1ab	100	90.231	ENSPREG00000014097	gfi1ab	100	90.231	Poecilia_reticulata
ENSCVAG00000011828	gfi1ab	100	50.580	ENSPCAG00000011020	GFI1	100	50.580	Procavia_capensis
ENSCVAG00000011828	gfi1ab	100	59.579	ENSPCOG00000020540	GFI1	100	61.916	Propithecus_coquereli
ENSCVAG00000011828	gfi1ab	100	60.993	ENSPVAG00000006928	GFI1	100	61.939	Pteropus_vampyrus
ENSCVAG00000011828	gfi1ab	100	82.051	ENSPNYG00000021183	gfi1ab	100	82.051	Pundamilia_nyererei
ENSCVAG00000011828	gfi1ab	100	65.570	ENSPNAG00000027258	gfi1ab	100	65.570	Pygocentrus_nattereri
ENSCVAG00000011828	gfi1ab	100	65.432	ENSPNAG00000014299	-	52	65.432	Pygocentrus_nattereri
ENSCVAG00000011828	gfi1ab	100	57.436	ENSPNAG00000028014	GFI1	100	57.436	Pygocentrus_nattereri
ENSCVAG00000011828	gfi1ab	100	58.879	ENSRNOG00000002042	Gfi1	100	59.535	Rattus_norvegicus
ENSCVAG00000011828	gfi1ab	100	61.124	ENSRBIG00000036467	GFI1	100	62.295	Rhinopithecus_bieti
ENSCVAG00000011828	gfi1ab	100	61.124	ENSRROG00000031687	GFI1	100	62.295	Rhinopithecus_roxellana
ENSCVAG00000011828	gfi1ab	100	60.465	ENSSBOG00000031300	GFI1	100	61.305	Saimiri_boliviensis_boliviensis
ENSCVAG00000011828	gfi1ab	99	41.514	ENSSFOG00015008114	-	98	41.514	Scleropages_formosus
ENSCVAG00000011828	gfi1ab	100	69.000	ENSSFOG00015020295	gfi1	100	69.000	Scleropages_formosus
ENSCVAG00000011828	gfi1ab	100	76.336	ENSSMAG00000002782	gfi1ab	100	76.336	Scophthalmus_maximus
ENSCVAG00000011828	gfi1ab	100	77.876	ENSSMAG00000002798	-	98	77.876	Scophthalmus_maximus
ENSCVAG00000011828	gfi1ab	100	78.811	ENSSDUG00000022410	gfi1ab	100	79.070	Seriola_dumerili
ENSCVAG00000011828	gfi1ab	100	79.070	ENSSLDG00000020163	gfi1ab	100	79.328	Seriola_lalandi_dorsalis
ENSCVAG00000011828	gfi1ab	83	87.879	ENSSPAG00000009140	gfi1ab	100	90.625	Stegastes_partitus
ENSCVAG00000011828	gfi1ab	100	62.322	ENSSSCG00000006902	GFI1	100	63.507	Sus_scrofa
ENSCVAG00000011828	gfi1ab	87	65.714	ENSTGUG00000006060	GFI1	100	65.730	Taeniopygia_guttata
ENSCVAG00000011828	gfi1ab	100	74.359	ENSTRUG00000000415	gfi1ab	100	74.359	Takifugu_rubripes
ENSCVAG00000011828	gfi1ab	100	70.529	ENSTNIG00000000651	gfi1ab	97	72.680	Tetraodon_nigroviridis
ENSCVAG00000011828	gfi1ab	100	61.321	ENSTTRG00000000082	GFI1	100	62.028	Tursiops_truncatus
ENSCVAG00000011828	gfi1ab	100	60.680	ENSUAMG00000021124	GFI1	91	61.165	Ursus_americanus
ENSCVAG00000011828	gfi1ab	100	63.846	ENSXETG00000023006	gfi1	98	63.846	Xenopus_tropicalis
ENSCVAG00000011828	gfi1ab	85	53.179	ENSXMAG00000009274	GFI1	70	54.416	Xiphophorus_maculatus
ENSCVAG00000011828	gfi1ab	100	88.689	ENSXMAG00000010523	gfi1ab	100	88.689	Xiphophorus_maculatus